RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 CST3P01034 146 aaPredicted RBP12.83□□□□□ -0.36
PTPRN-204ENST00000423636 PSAPP07602 524 aa12.83□□□□□ -0.36
PTPRN-204ENST00000423636 PIK3CAP42336 1068 aa12.83□□□□□ -0.36
PTPRN-204ENST00000423636 EPHB4P54760 987 aa12.83□□□□□ -0.36
PTPRN-204ENST00000423636 TNNC1P63316 161 aa12.83□□□□□ -0.36
PTPRN-204ENST00000423636 TMEM62Q0P6H9 643 aa12.83□□□□□ -0.36
PTPRN-204ENST00000423636 SYCP2LQ5T4T6 812 aa12.83□□□□□ -0.36
PTPRN-204ENST00000423636 KRT39Q6A163 491 aa12.83□□□□□ -0.36
PTPRN-204ENST00000423636 TCF4P15884 667 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 UBA1P22314 1058 aaKnown RBP12.82□□□□□ -0.36
PTPRN-204ENST00000423636 RRM1P23921 792 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 IRX5P78411 483 aaPredicted RBP12.82□□□□□ -0.36
PTPRN-204ENST00000423636 IRX3P78415 501 aaPredicted RBP12.82□□□□□ -0.36
PTPRN-204ENST00000423636 MAP3K10Q02779 954 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 CCDC38Q502W7 563 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 OTUD6AQ7L8S5 288 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 RHPN2Q8IUC4 686 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 TMEM192Q8IY95 271 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 IFT74Q96LB3 600 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 NT5C1BQ96P26 610 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 ACBD3Q9H3P7 528 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 ANAPC7Q9UJX3 599 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 TRPC6Q9Y210 931 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 FER1L6Q2WGJ9 1857 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 DDX3YO15523 660 aaKnown RBP12.82□□□□□ -0.36
PTPRN-204ENST00000423636 KRT19P08727 400 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 POTEJP0CG39 1038 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 MAPTP10636 758 aaKnown RBP12.82□□□□□ -0.36
PTPRN-204ENST00000423636 FGFR4P22455 802 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 GLRA2P23416 452 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 CTNNA1P35221 906 aaKnown RBP12.82□□□□□ -0.36
PTPRN-204ENST00000423636 TCF7P36402 384 aaPredicted RBP12.82□□□□□ -0.36
PTPRN-204ENST00000423636 CLCN3P51790 818 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 CCDC50Q8IVM0 306 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 FBXL13Q8NEE6 735 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 ZNF564Q8TBZ8 553 aaPredicted RBP12.82□□□□□ -0.36
PTPRN-204ENST00000423636 HELQQ8TDG4 1101 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 PIK3R5Q8WYR1 880 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 ATP6V0A1Q93050 837 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 MAGOHBQ96A72 148 aaKnown RBP12.82□□□□□ -0.36
PTPRN-204ENST00000423636 HERPUD2Q9BSE4 406 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 MSTO1Q9BUK6 570 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 AS3MTQ9HBK9 375 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 PPANQ9NQ55 473 aaKnown RBP12.82□□□□□ -0.36
PTPRN-204ENST00000423636 NXF1Q9UBU9 619 aaKnown RBP12.82□□□□□ -0.36
PTPRN-204ENST00000423636 CNOT8Q9UFF9 292 aaKnown RBP12.82□□□□□ -0.36
PTPRN-204ENST00000423636 HGSO14964 777 aaPredicted RBP12.82□□□□□ -0.36
PTPRN-204ENST00000423636 STBD1O95210 358 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 SHBGP04278 402 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 PRLRP16471 622 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 RAP1GAPP47736 663 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 JAK3P52333 1124 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 CYP24A1Q07973 514 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 PPP2R5AQ15172 486 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 TDRD10Q5VZ19 366 aaKnown RBP12.82□□□□□ -0.36
PTPRN-204ENST00000423636 MDM1Q8TC05 714 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 PRPF31Q8WWY3 499 aaKnown RBP12.82□□□□□ -0.36
PTPRN-204ENST00000423636 ATP6V0A4Q9HBG4 840 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 MLXIPLQ9NP71 852 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 AGO2Q9UKV8 859 aaKnown RBP12.82□□□□□ -0.36
PTPRN-204ENST00000423636 SNCAIPQ9Y6H5 919 aa12.82□□□□□ -0.36
PTPRN-204ENST00000423636 SOWAHBA6NEL2 793 aa12.81□□□□□ -0.36
PTPRN-204ENST00000423636 ATP2C2O75185 946 aa12.81□□□□□ -0.36
PTPRN-204ENST00000423636 HMGB2P26583 209 aaKnown RBP12.81□□□□□ -0.36
PTPRN-204ENST00000423636 HSD17B3P37058 310 aa12.81□□□□□ -0.36
PTPRN-204ENST00000423636 TFAMQ00059 246 aaKnown RBP12.81□□□□□ -0.36
PTPRN-204ENST00000423636 STXBP2Q15833 593 aa12.81□□□□□ -0.36
PTPRN-204ENST00000423636 TTC27Q6P3X3 843 aa12.81□□□□□ -0.36
PTPRN-204ENST00000423636 ABHD15Q6UXT9 468 aa12.81□□□□□ -0.36
PTPRN-204ENST00000423636 LRRN4Q8WUT4 740 aa12.81□□□□□ -0.36
PTPRN-204ENST00000423636 MKNK1Q9BUB5 465 aa12.81□□□□□ -0.36
PTPRN-204ENST00000423636 APOBEC3GQ9HC16 384 aaKnown RBP12.81□□□□□ -0.36
PTPRN-204ENST00000423636 DBR1Q9UK59 544 aaKnown RBP12.81□□□□□ -0.36
PTPRN-204ENST00000423636 PCDHB4Q9Y5E5 795 aa12.81□□□□□ -0.36
PTPRN-204ENST00000423636 COL11A1P12107 1806 aaPredicted RBP12.81□□□□□ -0.36
PTPRN-204ENST00000423636 PLA2G6O60733 806 aa12.81□□□□□ -0.36
PTPRN-204ENST00000423636 HLA-DRAP01903 254 aa12.81□□□□□ -0.36
PTPRN-204ENST00000423636 ACTN2P35609 894 aa12.81□□□□□ -0.36
PTPRN-204ENST00000423636 NCKAP1LP55160 1127 aa12.81□□□□□ -0.36
PTPRN-204ENST00000423636 STRN3Q13033 797 aa12.81□□□□□ -0.36
PTPRN-204ENST00000423636 PAK2Q13177 524 aa12.81□□□□□ -0.36
PTPRN-204ENST00000423636 UAP1Q16222 522 aaPredicted RBP12.81□□□□□ -0.36
PTPRN-204ENST00000423636 SULF1Q8IWU6 871 aa12.81□□□□□ -0.36
PTPRN-204ENST00000423636 CCDC105Q8IYK2 499 aa12.81□□□□□ -0.36
PTPRN-204ENST00000423636 RNF149Q8NC42 400 aa12.81□□□□□ -0.36
PTPRN-204ENST00000423636 EXOC4Q96A65 974 aa12.81□□□□□ -0.36
PTPRN-204ENST00000423636 FHDC1Q9C0D6 1143 aaPredicted RBP12.81□□□□□ -0.36
PTPRN-204ENST00000423636 EFCC1Q9HA90 598 aa12.81□□□□□ -0.36
PTPRN-204ENST00000423636 RBAKQ9NYW8 714 aaPredicted RBP12.81□□□□□ -0.36
PTPRN-204ENST00000423636 STK24Q9Y6E0 443 aa12.81□□□□□ -0.36
PTPRN-204ENST00000423636 ANKRD62A6NC57 917 aa12.8□□□□□ -0.36
PTPRN-204ENST00000423636 INO80B-WBP1J3KQ70 363 aa12.8□□□□□ -0.36
PTPRN-204ENST00000423636 ECHS1P30084 290 aa12.8□□□□□ -0.36
PTPRN-204ENST00000423636 PDE6CP51160 858 aa12.8□□□□□ -0.36
PTPRN-204ENST00000423636 GPC5P78333 572 aa12.8□□□□□ -0.36
PTPRN-204ENST00000423636 GPD1LQ8N335 351 aa12.8□□□□□ -0.36
PTPRN-204ENST00000423636 SLC7A3Q8WY07 619 aa12.8□□□□□ -0.36
PTPRN-204ENST00000423636 PCYT2Q99447 389 aa12.8□□□□□ -0.36
PTPRN-204ENST00000423636 INO80BQ9C086 356 aaPredicted RBP12.8□□□□□ -0.36
PTPRN-204ENST00000423636 MTMR12Q9C0I1 747 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms