RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 YWHABP31946 246 aaKnown RBP18.63■□□□□ 0.57
CHCHD3-202ENST00000423635 NTHL1P78549 312 aa18.63■□□□□ 0.57
CHCHD3-202ENST00000423635 LMNB2Q03252 620 aa18.63■□□□□ 0.57
CHCHD3-202ENST00000423635 GRIK3Q13003 919 aa18.63■□□□□ 0.57
CHCHD3-202ENST00000423635 NPY5RQ15761 445 aa18.63■□□□□ 0.57
CHCHD3-202ENST00000423635 ZBTB41Q5SVQ8 909 aa18.63■□□□□ 0.57
CHCHD3-202ENST00000423635 PRSS55Q6UWB4 352 aaPredicted RBP18.63■□□□□ 0.57
CHCHD3-202ENST00000423635 FAM177A1Q8N128 213 aaPredicted RBP18.63■□□□□ 0.57
CHCHD3-202ENST00000423635 LNX1Q8TBB1 728 aaPredicted RBP18.63■□□□□ 0.57
CHCHD3-202ENST00000423635 RTKNQ9BST9 563 aa18.63■□□□□ 0.57
CHCHD3-202ENST00000423635 SPTBN2O15020 2390 aa18.62■□□□□ 0.57
CHCHD3-202ENST00000423635 PATJQ8NI35 1801 aa18.62■□□□□ 0.57
CHCHD3-202ENST00000423635 TBC1D4O60343 1298 aa18.62■□□□□ 0.57
CHCHD3-202ENST00000423635 POU2F2P09086 479 aa18.62■□□□□ 0.57
CHCHD3-202ENST00000423635 ARF4P18085 180 aaPredicted RBP18.62■□□□□ 0.57
CHCHD3-202ENST00000423635 AKAP5P24588 427 aa18.62■□□□□ 0.57
CHCHD3-202ENST00000423635 PDIA3P30101 505 aaKnown RBP18.62■□□□□ 0.57
CHCHD3-202ENST00000423635 RPS9P46781 194 aaKnown RBP18.62■□□□□ 0.57
CHCHD3-202ENST00000423635 FZD5Q13467 585 aa18.62■□□□□ 0.57
CHCHD3-202ENST00000423635 EPHA7Q15375 998 aa18.62■□□□□ 0.57
CHCHD3-202ENST00000423635 PPM1LQ5SGD2 360 aa18.62■□□□□ 0.57
CHCHD3-202ENST00000423635 LIN9Q5TKA1 542 aa18.62■□□□□ 0.57
CHCHD3-202ENST00000423635 GALNT17Q6IS24 598 aa18.62■□□□□ 0.57
CHCHD3-202ENST00000423635 BLOC1S2Q6QNY1 142 aa18.62■□□□□ 0.57
CHCHD3-202ENST00000423635 PIK3R5Q8WYR1 880 aa18.62■□□□□ 0.57
CHCHD3-202ENST00000423635 MTRQ99707 1265 aa18.62■□□□□ 0.57
CHCHD3-202ENST00000423635 APOL6Q9BWW8 343 aa18.62■□□□□ 0.57
CHCHD3-202ENST00000423635 TRIM6Q9C030 488 aaPredicted RBP18.62■□□□□ 0.57
CHCHD3-202ENST00000423635 SLKQ9H2G2 1235 aaPredicted RBP18.62■□□□□ 0.57
CHCHD3-202ENST00000423635 NXF3Q9H4D5 531 aaKnown RBP18.62■□□□□ 0.57
CHCHD3-202ENST00000423635 BMP2KQ9NSY1 1161 aaPredicted RBP18.62■□□□□ 0.57
CHCHD3-202ENST00000423635 SMG5Q9UPR3 1016 aaKnown RBP18.62■□□□□ 0.57
CHCHD3-202ENST00000423635 COL4A3Q01955 1670 aa18.61■□□□□ 0.57
CHCHD3-202ENST00000423635 SF3B1O75533 1304 aaKnown RBP eCLIP18.61■□□□□ 0.578e-7■■■■■ 137.9
CHCHD3-202ENST00000423635 INO80B-WBP1J3KQ70 363 aa18.61■□□□□ 0.57
CHCHD3-202ENST00000423635 NCAM2O15394 837 aa18.61■□□□□ 0.57
CHCHD3-202ENST00000423635 C8AP07357 584 aa18.61■□□□□ 0.57
CHCHD3-202ENST00000423635 CD72P21854 359 aa18.61■□□□□ 0.57
CHCHD3-202ENST00000423635 MBTD1Q05BQ5 628 aa18.61■□□□□ 0.57
CHCHD3-202ENST00000423635 TFDP1Q14186 410 aa18.61■□□□□ 0.57
CHCHD3-202ENST00000423635 HSP90AA2PQ14568 343 aaPredicted RBP18.61■□□□□ 0.57
CHCHD3-202ENST00000423635 UVSSAQ2YD98 709 aa18.61■□□□□ 0.57
CHCHD3-202ENST00000423635 XKR9Q5GH70 373 aa18.61■□□□□ 0.57
CHCHD3-202ENST00000423635 PPP4R3AQ6IN85 833 aa18.61■□□□□ 0.57
CHCHD3-202ENST00000423635 ITFG1Q8TB96 612 aa18.61■□□□□ 0.57
CHCHD3-202ENST00000423635 RABGGTAQ92696 567 aa18.61■□□□□ 0.57
CHCHD3-202ENST00000423635 JAKMIP1Q96N16 626 aaKnown RBP18.61■□□□□ 0.57
CHCHD3-202ENST00000423635 LXNQ9BS40 222 aa18.61■□□□□ 0.57
CHCHD3-202ENST00000423635 TTPALQ9BTX7 342 aa18.61■□□□□ 0.57
CHCHD3-202ENST00000423635 PHF20Q9BVI0 1012 aa18.61■□□□□ 0.57
CHCHD3-202ENST00000423635 NFKBIZQ9BYH8 718 aa18.61■□□□□ 0.57
CHCHD3-202ENST00000423635 FAM126AQ9BYI3 521 aaPredicted RBP18.61■□□□□ 0.57
CHCHD3-202ENST00000423635 XPNPEP1Q9NQW7 623 aa18.61■□□□□ 0.57
CHCHD3-202ENST00000423635 KCNH3Q9ULD8 1083 aa18.61■□□□□ 0.57
CHCHD3-202ENST00000423635 ZFHX4Q86UP3 3567 aa18.6■□□□□ 0.57
CHCHD3-202ENST00000423635 A0A1B0GUA9 196 aa18.6■□□□□ 0.57
CHCHD3-202ENST00000423635 ZBTB39O15060 712 aa18.6■□□□□ 0.57
CHCHD3-202ENST00000423635 TBX3O15119 743 aa18.6■□□□□ 0.57
CHCHD3-202ENST00000423635 XYLBO75191 536 aa18.6■□□□□ 0.57
CHCHD3-202ENST00000423635 RPS6KB1P23443 525 aa18.6■□□□□ 0.57
CHCHD3-202ENST00000423635 CCT2P78371 535 aaKnown RBP18.6■□□□□ 0.57
CHCHD3-202ENST00000423635 INF2Q27J81 1249 aa18.6■□□□□ 0.57
CHCHD3-202ENST00000423635 RTL10Q7L3V2 364 aa18.6■□□□□ 0.57
CHCHD3-202ENST00000423635 TRIM22Q8IYM9 498 aa18.6■□□□□ 0.57
CHCHD3-202ENST00000423635 HAS1Q92839 578 aa18.6■□□□□ 0.57
CHCHD3-202ENST00000423635 PAAF1Q9BRP4 392 aa18.6■□□□□ 0.57
CHCHD3-202ENST00000423635 ZSWIM4Q9H7M6 989 aa18.6■□□□□ 0.57
CHCHD3-202ENST00000423635 NCOA5Q9HCD5 579 aaKnown RBP18.6■□□□□ 0.57
CHCHD3-202ENST00000423635 PRMT8Q9NR22 394 aaPredicted RBP18.6■□□□□ 0.57
CHCHD3-202ENST00000423635 RGL1Q9NZL6 768 aa18.6■□□□□ 0.57
CHCHD3-202ENST00000423635 CDV3Q9UKY7 258 aaKnown RBP18.6■□□□□ 0.57
CHCHD3-202ENST00000423635 CCL16O15467 120 aa18.59■□□□□ 0.57
CHCHD3-202ENST00000423635 DEXIO95424 95 aa18.59■□□□□ 0.57
CHCHD3-202ENST00000423635 TARSP26639 723 aaKnown RBP18.59■□□□□ 0.57
CHCHD3-202ENST00000423635 SSRP1Q08945 709 aaKnown RBP18.59■□□□□ 0.57
CHCHD3-202ENST00000423635 TUSC3Q13454 348 aa18.59■□□□□ 0.57
CHCHD3-202ENST00000423635 SLC27A1Q6PCB7 646 aa18.59■□□□□ 0.57
CHCHD3-202ENST00000423635 MAMSTRQ6ZN01 415 aa18.59■□□□□ 0.57
CHCHD3-202ENST00000423635 KRT25Q7Z3Z0 450 aa18.59■□□□□ 0.57
CHCHD3-202ENST00000423635 KLK14Q9P0G3 267 aa18.59■□□□□ 0.57
CHCHD3-202ENST00000423635 DNMT3BQ9UBC3 853 aaKnown RBP18.59■□□□□ 0.57
CHCHD3-202ENST00000423635 SNX14Q9Y5W7 946 aa18.59■□□□□ 0.57
CHCHD3-202ENST00000423635 DCDC2BA2VCK2 349 aa18.58■□□□□ 0.57
CHCHD3-202ENST00000423635 SHISA7A6NL88 538 aa18.58■□□□□ 0.57
CHCHD3-202ENST00000423635 ECI2O75521 394 aa18.58■□□□□ 0.57
CHCHD3-202ENST00000423635 ADRB1P08588 477 aa18.58■□□□□ 0.57
CHCHD3-202ENST00000423635 GCFC2P16383 781 aaKnown RBP18.58■□□□□ 0.57
CHCHD3-202ENST00000423635 HSPA4P34932 840 aa18.58■□□□□ 0.57
CHCHD3-202ENST00000423635 ARL2P36404 184 aa18.58■□□□□ 0.57
CHCHD3-202ENST00000423635 CAPSQ13938 189 aa18.58■□□□□ 0.57
CHCHD3-202ENST00000423635 RAB33AQ14088 237 aa18.58■□□□□ 0.57
CHCHD3-202ENST00000423635 PSMD5Q16401 504 aa18.58■□□□□ 0.57
CHCHD3-202ENST00000423635 FAM171A1Q5VUB5 890 aa18.58■□□□□ 0.57
CHCHD3-202ENST00000423635 PDXDC1Q6P996 788 aa18.58■□□□□ 0.57
CHCHD3-202ENST00000423635 TSSK4Q6SA08 328 aa18.58■□□□□ 0.57
CHCHD3-202ENST00000423635 ZNF852Q6ZMS4 543 aa18.58■□□□□ 0.57
CHCHD3-202ENST00000423635 NPAS3Q8IXF0 933 aa18.58■□□□□ 0.57
CHCHD3-202ENST00000423635 DYDC2Q96IM9 177 aa18.58■□□□□ 0.57
CHCHD3-202ENST00000423635 KXD1Q9BQD3 176 aa18.58■□□□□ 0.57
CHCHD3-202ENST00000423635 PARP2Q9UGN5 583 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms