RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 PARP2Q9UGN5 583 aa10.14□□□□□ -0.79
PDGFC-202ENST00000422544 MAN1B1Q9UKM7 699 aa10.14□□□□□ -0.79
PDGFC-202ENST00000422544 MAPK8IP1Q9UQF2 711 aa10.14□□□□□ -0.79
PDGFC-202ENST00000422544 INPP5FQ9Y2H2 1132 aa10.14□□□□□ -0.79
PDGFC-202ENST00000422544 USP34Q70CQ2 3546 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 TTC3P53804 2025 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 A0A0B4J269 797 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 BIN1O00499 593 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 TGFB1I1O43294 461 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 HOXA2O43364 376 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 RECQL4O94761 1208 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 ARHGEF15O94989 841 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 CA3P07451 260 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 DNAJB2P25686 324 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 ADSSP30520 456 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 BTG3Q14201 252 aaPredicted RBP10.13□□□□□ -0.79
PDGFC-202ENST00000422544 NOLC1Q14978 699 aaKnown RBP eCLIP10.13□□□□□ -0.79
PDGFC-202ENST00000422544 RAB30Q15771 203 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 KNOP1Q1ED39 458 aaKnown RBP10.13□□□□□ -0.79
PDGFC-202ENST00000422544 BMT2Q1RMZ1 405 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 ZBTB41Q5SVQ8 909 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 ZNF697Q5TEC3 545 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 ZNF658Q5TYW1 1059 aaPredicted RBP10.13□□□□□ -0.79
PDGFC-202ENST00000422544 GLB1LQ6UWU2 654 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 TMEM192Q8IY95 271 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 POMGNT1Q8WZA1 660 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 TIFAQ96CG3 184 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 ZFP42Q96MM3 310 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 GAD1Q99259 594 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 MSTO1Q9BUK6 570 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 TMEM117Q9H0C3 514 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 GBP3Q9H0R5 595 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 NUP62CLQ9H1M0 184 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 RSAD1Q9HA92 442 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 RC3H2Q9HBD1 1191 aaKnown RBP10.13□□□□□ -0.79
PDGFC-202ENST00000422544 UBN1Q9NPG3 1134 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 KIAA1468Q9P260 1216 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 GIT1Q9Y2X7 761 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 STYXL1Q9Y6J8 313 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 C5orf42Q9H799 3197 aa10.13□□□□□ -0.79
PDGFC-202ENST00000422544 PRRC2BQ5JSZ5 2229 aaKnown RBP10.13□□□□□ -0.79
PDGFC-202ENST00000422544 UBE4BO95155 1302 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 ARL5CA6NH57 179 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 CLIC2O15247 247 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 MBD3O95983 291 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 POMCP01189 267 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 BMP6P22004 513 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 MLH1P40692 756 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 TNFSF9P41273 254 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 GRM5P41594 1212 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 PRCPP42785 496 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 GRIN2CQ14957 1233 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 NOMO2Q5JPE7 1267 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 LRRC55Q6ZSA7 311 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 CMTR2Q8IYT2 770 aaKnown RBP10.12□□□□□ -0.79
PDGFC-202ENST00000422544 PIP4P2Q8N4L2 257 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 FIBCD1Q8N539 461 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 SP7Q8TDD2 431 aaPredicted RBP10.12□□□□□ -0.79
PDGFC-202ENST00000422544 ACAP3Q96P50 834 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 CBWD1Q9BRT8 395 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 CCDC94Q9BW85 323 aaPredicted RBP10.12□□□□□ -0.79
PDGFC-202ENST00000422544 CXCL16Q9H2A7 254 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 PCIF1Q9H4Z3 704 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 AGPAT3Q9NRZ7 376 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 TYW1Q9NV66 732 aaKnown RBP10.12□□□□□ -0.79
PDGFC-202ENST00000422544 MIOSQ9NXC5 875 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 HCSTQ9UBK5 93 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 AGO2Q9UKV8 859 aaKnown RBP10.12□□□□□ -0.79
PDGFC-202ENST00000422544 MICAL3Q7RTP6 2002 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 ZMYM2Q9UBW7 1377 aa10.12□□□□□ -0.79
PDGFC-202ENST00000422544 LINC01553A4QN01 128 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 GOLGA8IPA6NC78 632 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 GOLGA8JA6NMD2 632 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 TULP1O00294 542 aaPredicted RBP10.11□□□□□ -0.79
PDGFC-202ENST00000422544 OGTO15294 1046 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 MEFVO15553 781 aaPredicted RBP10.11□□□□□ -0.79
PDGFC-202ENST00000422544 FAM189A1O60320 539 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 KIF20AO95235 890 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 CLTAP09496 248 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 GARTP22102 1010 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 ACOT2P49753 483 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 SCNN1GP51170 649 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 YARSP54577 528 aaKnown RBP10.11□□□□□ -0.79
PDGFC-202ENST00000422544 TAP1Q03518 808 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 MORC3Q14149 939 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 SLC10A6Q3KNW5 377 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 SPOUT1Q5T280 376 aaKnown RBP10.11□□□□□ -0.79
PDGFC-202ENST00000422544 PPP2R2DQ66LE6 453 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 ARMCX5Q6P1M9 558 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 HS2ST1Q7LGA3 356 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 SPRED2Q7Z698 418 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 GUF1Q8N442 669 aaKnown RBP10.11□□□□□ -0.79
PDGFC-202ENST00000422544 GSTCDQ8NEC7 633 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 ZSWIM2Q8NEG5 633 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 URGCPQ8TCY9 931 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 NOC3LQ8WTT2 800 aaKnown RBP10.11□□□□□ -0.79
PDGFC-202ENST00000422544 SAAL1Q96ER3 474 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 FAM213AQ9BRX8 229 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 KCTD10Q9H3F6 313 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 CERS4Q9HA82 394 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms