RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 HDAC7Q8WUI4 952 aa12.75□□□□□ -0.37
SQSTM1-203ENST00000422245 IFT74Q96LB3 600 aa12.75□□□□□ -0.37
SQSTM1-203ENST00000422245 BHMT2Q9H2M3 363 aa12.75□□□□□ -0.37
SQSTM1-203ENST00000422245 KLK14Q9P0G3 267 aa12.75□□□□□ -0.37
SQSTM1-203ENST00000422245 CACNA1HO95180 2353 aa12.74□□□□□ -0.37
SQSTM1-203ENST00000422245 PHLPP2Q6ZVD8 1323 aa12.74□□□□□ -0.37
SQSTM1-203ENST00000422245 TADA2AO75478 443 aa12.74□□□□□ -0.37
SQSTM1-203ENST00000422245 RECQL4O94761 1208 aa12.74□□□□□ -0.37
SQSTM1-203ENST00000422245 ASGR2P07307 311 aa12.74□□□□□ -0.37
SQSTM1-203ENST00000422245 LIG1P18858 919 aa12.74□□□□□ -0.37
SQSTM1-203ENST00000422245 MRE11P49959 708 aa12.74□□□□□ -0.37
SQSTM1-203ENST00000422245 VCPP55072 806 aaKnown RBP12.74□□□□□ -0.37
SQSTM1-203ENST00000422245 PDIA5Q14554 519 aa12.74□□□□□ -0.37
SQSTM1-203ENST00000422245 NBR1Q14596 966 aa12.74□□□□□ -0.37
SQSTM1-203ENST00000422245 RABEP1Q15276 862 aa12.74□□□□□ -0.37
SQSTM1-203ENST00000422245 ALYREFQ86V81 257 aaKnown RBP12.74□□□□□ -0.37
SQSTM1-203ENST00000422245 IGSF22Q8N9C0 903 aa12.74□□□□□ -0.37
SQSTM1-203ENST00000422245 RIN2Q8WYP3 895 aaPredicted RBP12.74□□□□□ -0.37
SQSTM1-203ENST00000422245 STAMQ92783 540 aa12.74□□□□□ -0.37
SQSTM1-203ENST00000422245 KIFC3Q9BVG8 833 aa12.74□□□□□ -0.37
SQSTM1-203ENST00000422245 GPR62Q9BZJ7 368 aa12.74□□□□□ -0.37
SQSTM1-203ENST00000422245 IRF2BPLQ9H1B7 796 aa12.74□□□□□ -0.37
SQSTM1-203ENST00000422245 PLEKHA4Q9H4M7 779 aa12.74□□□□□ -0.37
SQSTM1-203ENST00000422245 FNIP2Q9P278 1114 aa12.74□□□□□ -0.37
SQSTM1-203ENST00000422245 LIMD1Q9UGP4 676 aa12.74□□□□□ -0.37
SQSTM1-203ENST00000422245 CLUHO75153 1309 aa12.73□□□□□ -0.37
SQSTM1-203ENST00000422245 MTCL1Q9Y4B5 1905 aaKnown RBP12.73□□□□□ -0.37
SQSTM1-203ENST00000422245 CASTOR2A6NHX0 329 aa12.73□□□□□ -0.37
SQSTM1-203ENST00000422245 TTLL13PA6NNM8 815 aa12.73□□□□□ -0.37
SQSTM1-203ENST00000422245 PTGESO14684 152 aa12.73□□□□□ -0.37
SQSTM1-203ENST00000422245 PAPLNO95428 1278 aa12.73□□□□□ -0.37
SQSTM1-203ENST00000422245 THP07101 528 aa12.73□□□□□ -0.37
SQSTM1-203ENST00000422245 AVPR2P30518 371 aa12.73□□□□□ -0.37
SQSTM1-203ENST00000422245 PRPHP41219 470 aa12.73□□□□□ -0.37
SQSTM1-203ENST00000422245 ELAVL2Q12926 359 aaKnown RBP12.73□□□□□ -0.37
SQSTM1-203ENST00000422245 PTGDRQ13258 359 aa12.73□□□□□ -0.37
SQSTM1-203ENST00000422245 ECM1Q16610 540 aa12.73□□□□□ -0.37
SQSTM1-203ENST00000422245 IER5LQ5T953 404 aa12.73□□□□□ -0.37
SQSTM1-203ENST00000422245 KRT79Q5XKE5 535 aa12.73□□□□□ -0.37
SQSTM1-203ENST00000422245 FEZF2Q8TBJ5 459 aa12.73□□□□□ -0.37
SQSTM1-203ENST00000422245 B3GALT6Q96L58 329 aa12.73□□□□□ -0.37
SQSTM1-203ENST00000422245 WDR6Q9NNW5 1121 aaKnown RBP12.73□□□□□ -0.37
SQSTM1-203ENST00000422245 DDX19AQ9NUU7 478 aaKnown RBP12.73□□□□□ -0.37
SQSTM1-203ENST00000422245 ZDHHC7Q9NXF8 308 aa12.73□□□□□ -0.37
SQSTM1-203ENST00000422245 SNTG2Q9NY99 539 aa12.73□□□□□ -0.37
SQSTM1-203ENST00000422245 KIAA1024Q9UPX6 916 aa12.73□□□□□ -0.37
SQSTM1-203ENST00000422245 PCDHB6Q9Y5E3 794 aa12.73□□□□□ -0.37
SQSTM1-203ENST00000422245 CCDC195A0A1B0GUA6 201 aa12.72□□□□□ -0.37
SQSTM1-203ENST00000422245 TGM5O43548 720 aa12.72□□□□□ -0.37
SQSTM1-203ENST00000422245 ST18O60284 1047 aa12.72□□□□□ -0.37
SQSTM1-203ENST00000422245 KIF4AO95239 1232 aa12.72□□□□□ -0.37
SQSTM1-203ENST00000422245 PDGFBP01127 241 aaPredicted RBP12.72□□□□□ -0.37
SQSTM1-203ENST00000422245 EDN1P05305 212 aa12.72□□□□□ -0.37
SQSTM1-203ENST00000422245 TOB1P50616 345 aaPredicted RBP12.72□□□□□ -0.37
SQSTM1-203ENST00000422245 TCF15Q12870 199 aa12.72□□□□□ -0.37
SQSTM1-203ENST00000422245 DMP1Q13316 513 aaPredicted RBP12.72□□□□□ -0.37
SQSTM1-203ENST00000422245 RTP2Q5QGT7 225 aa12.72□□□□□ -0.37
SQSTM1-203ENST00000422245 ATF7IP2Q5U623 682 aa12.72□□□□□ -0.37
SQSTM1-203ENST00000422245 EEF1DP3Q658K8 133 aa12.72□□□□□ -0.37
SQSTM1-203ENST00000422245 PDXDC1Q6P996 788 aa12.72□□□□□ -0.37
SQSTM1-203ENST00000422245 PIK3R5Q8WYR1 880 aa12.72□□□□□ -0.37
SQSTM1-203ENST00000422245 SMG7Q92540 1137 aaKnown RBP12.72□□□□□ -0.37
SQSTM1-203ENST00000422245 DRC1Q96MC2 740 aa12.72□□□□□ -0.37
SQSTM1-203ENST00000422245 TTPALQ9BTX7 342 aa12.72□□□□□ -0.37
SQSTM1-203ENST00000422245 IGSF9Q9P2J2 1179 aa12.72□□□□□ -0.37
SQSTM1-203ENST00000422245 DNM3Q9UQ16 869 aa12.72□□□□□ -0.37
SQSTM1-203ENST00000422245 TMEM189-UBE2V1I3L0A0 370 aa12.71□□□□□ -0.37
SQSTM1-203ENST00000422245 RFPL2O75678 378 aa12.71□□□□□ -0.37
SQSTM1-203ENST00000422245 TDGQ13569 410 aa12.71□□□□□ -0.37
SQSTM1-203ENST00000422245 NAB2Q15742 525 aa12.71□□□□□ -0.37
SQSTM1-203ENST00000422245 RILPL1Q5EBL4 403 aa12.71□□□□□ -0.37
SQSTM1-203ENST00000422245 DTHD1Q6ZMT9 781 aa12.71□□□□□ -0.37
SQSTM1-203ENST00000422245 PALB2Q86YC2 1186 aa12.71□□□□□ -0.37
SQSTM1-203ENST00000422245 HASPINQ8TF76 798 aa12.71□□□□□ -0.37
SQSTM1-203ENST00000422245 RABGGTAQ92696 567 aa12.71□□□□□ -0.37
SQSTM1-203ENST00000422245 ZNF707Q96C28 371 aaPredicted RBP12.71□□□□□ -0.37
SQSTM1-203ENST00000422245 PAAF1Q9BRP4 392 aa12.71□□□□□ -0.37
SQSTM1-203ENST00000422245 TIPINQ9BVW5 301 aa12.71□□□□□ -0.37
SQSTM1-203ENST00000422245 MFSD1Q9H3U5 465 aa12.71□□□□□ -0.37
SQSTM1-203ENST00000422245 SMOC2Q9H3U7 446 aa12.71□□□□□ -0.37
SQSTM1-203ENST00000422245 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.71□□□□□ -0.37
SQSTM1-203ENST00000422245 EPS15L1Q9UBC2 864 aa12.71□□□□□ -0.37
SQSTM1-203ENST00000422245 CACNG4Q9UBN1 327 aa12.71□□□□□ -0.37
SQSTM1-203ENST00000422245 FBXW11Q9UKB1 542 aa12.71□□□□□ -0.37
SQSTM1-203ENST00000422245 DUSP12Q9UNI6 340 aa12.71□□□□□ -0.37
SQSTM1-203ENST00000422245 TNFSF13BQ9Y275 285 aa12.71□□□□□ -0.37
SQSTM1-203ENST00000422245 GDAQ9Y2T3 454 aa12.71□□□□□ -0.37
SQSTM1-203ENST00000422245 WDFY4Q6ZS81 3184 aa12.71□□□□□ -0.37
SQSTM1-203ENST00000422245 CCDC169A6NNP5 214 aa12.7□□□□□ -0.38
SQSTM1-203ENST00000422245 K7ERI5 159 aa12.7□□□□□ -0.38
SQSTM1-203ENST00000422245 HIP1RO75146 1068 aa12.7□□□□□ -0.38
SQSTM1-203ENST00000422245 RPL17P18621 184 aaKnown RBP12.7□□□□□ -0.38
SQSTM1-203ENST00000422245 GBP2P32456 591 aaPredicted RBP12.7□□□□□ -0.38
SQSTM1-203ENST00000422245 NPTX2P47972 431 aa12.7□□□□□ -0.38
SQSTM1-203ENST00000422245 PSMD5Q16401 504 aa12.7□□□□□ -0.38
SQSTM1-203ENST00000422245 ZNF568Q3ZCX4 644 aa12.7□□□□□ -0.38
SQSTM1-203ENST00000422245 NT5DC1Q5TFE4 455 aa12.7□□□□□ -0.38
SQSTM1-203ENST00000422245 LIN9Q5TKA1 542 aa12.7□□□□□ -0.38
SQSTM1-203ENST00000422245 FAM171A1Q5VUB5 890 aa12.7□□□□□ -0.38
SQSTM1-203ENST00000422245 LILRA6Q6PI73 481 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms