RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 TTC13Q8NBP0 860 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 HPDLQ96IR7 371 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 RILPQ96NA2 401 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 SMYD2Q9NRG4 433 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 FAM8A1Q9UBU6 413 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 MSRAQ9UJ68 235 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 SOX5P35711 763 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 ALDH5A1P51649 535 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-206ENST00000421141 TPD52P55327 224 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-206ENST00000421141 CCDC15Q0P6D6 951 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 GLYCTKQ8IVS8 523 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 ATP2C2O75185 946 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 ECEL1O95672 775 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 CTNNA1P35221 906 aaKnown RBP11.43□□□□□ -0.58
PTCH1-206ENST00000421141 HARS2P49590 506 aaKnown RBP11.43□□□□□ -0.58
PTCH1-206ENST00000421141 KRT71Q3SY84 523 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 TDRD10Q5VZ19 366 aaKnown RBP11.43□□□□□ -0.58
PTCH1-206ENST00000421141 ALKBH5Q6P6C2 394 aaKnown RBP11.43□□□□□ -0.58
PTCH1-206ENST00000421141 EPAS1Q99814 870 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 BPIFA3Q9BQP9 254 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 DAAM1Q9Y4D1 1078 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 ATRNO75882 1429 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 TRIM49BA6NDI0 452 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 MSH4O15457 936 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 B3GAT3O94766 335 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 PDE1BQ01064 536 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 PGM5Q15124 567 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 TAF2Q6P1X5 1199 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 CATSPER3Q86XQ3 398 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 CAMKK2Q96RR4 588 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 TBX20Q9UMR3 447 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 PITPNM2Q9BZ72 1349 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 TCRBV5S4A2TA0A5A2 114 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 NFIBO00712 420 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 VTNP04004 478 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 PDGFRBP09619 1106 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 KCNA4P22459 653 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 RWDD2BP57060 319 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 NR1H3Q13133 447 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 DRAP1Q14919 205 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-206ENST00000421141 TRIM9Q9C026 710 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 EVI5O60447 810 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 CIB2O75838 187 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 CHGBP05060 677 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 THP07101 528 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 ACADSBP45954 432 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 TROAPQ12815 778 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 PCGF5Q86SE9 256 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 TACC3Q9Y6A5 838 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 PPFIA4O75335 1185 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 Q4G0T1 1027 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 ADGRA1Q86SQ6 560 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 RIOX2Q8IUF8 465 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 TMEM199Q8N511 208 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 N4BP2L2Q92802 583 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-206ENST00000421141 DIS3Q9Y2L1 958 aaKnown RBP11.42□□□□□ -0.58
PTCH1-206ENST00000421141 GNL1P36915 607 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-206ENST00000421141 RAB27AP51159 221 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 LY6KQ17RY6 165 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 ASIC4Q96FT7 647 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 NUP85Q9BW27 656 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 SIK2Q9H0K1 926 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 HEY1Q9Y5J3 304 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 IRF6O14896 467 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 GUCY2FP51841 1108 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 MFSD10Q14728 455 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 TMEM132BQ14DG7 1078 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 CAPN12Q6ZSI9 719 aa11.42□□□□□ -0.58
PTCH1-206ENST00000421141 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-206ENST00000421141 H3BRJ5 948 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 CASP1P29466 404 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 TAF6P49848 677 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 CASP7P55210 303 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 GRIK4Q16099 956 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 ATP6V1E2Q96A05 226 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 INTS2Q9H0H0 1204 aaKnown RBP11.41□□□□□ -0.58
PTCH1-206ENST00000421141 DDX56Q9NY93 547 aaKnown RBP11.41□□□□□ -0.58
PTCH1-206ENST00000421141 HDAC11Q96DB2 347 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 NUDCD1Q96RS6 583 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 ZRANB2O95218 330 aaKnown RBP eCLIP11.41□□□□□ -0.58
PTCH1-206ENST00000421141 KLRC1P26715 233 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 SERPINB6P35237 376 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 PLD1Q13393 1074 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 SPDYE1Q8NFV5 336 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-206ENST00000421141 SYTL5Q8TDW5 730 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-206ENST00000421141 PLEKHA4Q9H4M7 779 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 RNF14Q9UBS8 474 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 PPP1R12AO14974 1030 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-206ENST00000421141 NDUFA10O95299 355 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 SFSWAPQ12872 951 aaKnown RBP11.41□□□□□ -0.58
PTCH1-206ENST00000421141 DEPDC1BQ8WUY9 529 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 SPON2Q9BUD6 331 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 DPP3Q9NY33 737 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 CITO14578 2027 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 GOLGA8QA0A0J9YX86 632 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 GOLGA8OA6NCC3 632 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 GOLGA8NF8WBI6 632 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 CLGNO14967 610 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 FAM200BP0CF97 657 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 CACNB2Q08289 660 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms