RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 GRM2Q14416 872 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 KARSQ15046 597 aaKnown RBP10.14□□□□□ -0.79
TRIM39-206ENST00000420746 ELF2Q15723 593 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 AXDND1Q5T1B0 1012 aaPredicted RBP10.14□□□□□ -0.79
TRIM39-206ENST00000420746 PDXDC1Q6P996 788 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 CATSPER4Q7RTX7 472 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 DEFB124Q8NES8 71 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 PIBF1Q8WXW3 757 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 PIK3R5Q8WYR1 880 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 B3GALT6Q96L58 329 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 ASB16Q96NS5 453 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 UBL7Q96S82 380 aaPredicted RBP10.14□□□□□ -0.79
TRIM39-206ENST00000420746 CLSTN3Q9BQT9 956 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 LZTS2Q9BRK4 669 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 FDXACB1Q9BRP7 624 aaPredicted RBP10.14□□□□□ -0.79
TRIM39-206ENST00000420746 MKNK1Q9BUB5 465 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 DSCC1Q9BVC3 393 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 APOL6Q9BWW8 343 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 NRBP2Q9NSY0 501 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 RBM12Q9NTZ6 932 aaKnown RBP10.14□□□□□ -0.79
TRIM39-206ENST00000420746 HCFC1R1Q9NWW0 138 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 PCDHA10Q9Y5I2 948 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 DOCK6Q96HP0 2047 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 SF3B1O75533 1304 aaKnown RBP eCLIP10.13□□□□□ -0.79
TRIM39-206ENST00000420746 ERICH2A1L162 156 aa10.13□□□□□ -0.79
TRIM39-206ENST00000420746 UPK3BL1B0FP48 263 aa10.13□□□□□ -0.79
TRIM39-206ENST00000420746 UPK3BL2E5RIL1 263 aa10.13□□□□□ -0.79
TRIM39-206ENST00000420746 F8W810 466 aa10.13□□□□□ -0.79
TRIM39-206ENST00000420746 IPO5O00410 1097 aaKnown RBP10.13□□□□□ -0.79
TRIM39-206ENST00000420746 ZNF263O14978 683 aa10.13□□□□□ -0.79
TRIM39-206ENST00000420746 KHNYNO15037 678 aaKnown RBP10.13□□□□□ -0.79
TRIM39-206ENST00000420746 SEC24BO95487 1268 aa10.13□□□□□ -0.79
TRIM39-206ENST00000420746 CEBPBP17676 345 aa10.13□□□□□ -0.79
TRIM39-206ENST00000420746 DNM2P50570 870 aa10.13□□□□□ -0.79
TRIM39-206ENST00000420746 CCINQ13939 588 aa10.13□□□□□ -0.79
TRIM39-206ENST00000420746 ZNF423Q2M1K9 1284 aa10.13□□□□□ -0.79
TRIM39-206ENST00000420746 SLC5A9Q2M3M2 681 aa10.13□□□□□ -0.79
TRIM39-206ENST00000420746 FAM78AQ5JUQ0 283 aa10.13□□□□□ -0.79
TRIM39-206ENST00000420746 RTP2Q5QGT7 225 aa10.13□□□□□ -0.79
TRIM39-206ENST00000420746 VITQ6UXI7 678 aa10.13□□□□□ -0.79
TRIM39-206ENST00000420746 CYB5R4Q7L1T6 521 aa10.13□□□□□ -0.79
TRIM39-206ENST00000420746 CATIPQ7Z7H3 387 aa10.13□□□□□ -0.79
TRIM39-206ENST00000420746 DUSP15Q9H1R2 295 aaPredicted RBP10.13□□□□□ -0.79
TRIM39-206ENST00000420746 TRPV4Q9HBA0 871 aa10.13□□□□□ -0.79
TRIM39-206ENST00000420746 TBC1D22BQ9NU19 505 aa10.13□□□□□ -0.79
TRIM39-206ENST00000420746 C2orf42Q9NWW7 574 aa10.13□□□□□ -0.79
TRIM39-206ENST00000420746 GABBR1Q9UBS5 961 aa10.13□□□□□ -0.79
TRIM39-206ENST00000420746 DACH1Q9UI36 760 aa10.13□□□□□ -0.79
TRIM39-206ENST00000420746 ZMYM2Q9UBW7 1377 aa10.13□□□□□ -0.79
TRIM39-206ENST00000420746 NOTCH4Q99466 2003 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 CELSR3Q9NYQ7 3312 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 CFAP46Q8IYW2 2715 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 IGKV6-21A0A0C4DH24 114 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 MYBPHLA2RUH7 354 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 ARL5CA6NH57 179 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 ZNF197O14709 1029 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 C1QL1O75973 258 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 SREBF1P36956 1147 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 GNAQP50148 359 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 CREB5Q02930 508 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 RAB33AQ14088 237 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 TARBP2Q15633 366 aaKnown RBP10.12□□□□□ -0.79
TRIM39-206ENST00000420746 PSMD5Q16401 504 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 WDR44Q5JSH3 913 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 PRSS36Q5K4E3 855 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 UBXN11Q5T124 520 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 POTEHQ6S545 545 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 PRSS55Q6UWB4 352 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-206ENST00000420746 TRMT1LQ7Z2T5 733 aaKnown RBP10.12□□□□□ -0.79
TRIM39-206ENST00000420746 RAB44Q7Z6P3 723 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-206ENST00000420746 RALGPS2Q86X27 583 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-206ENST00000420746 MFSD6LQ8IWD5 586 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 CAMKK1Q8N5S9 505 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 LNX1Q8TBB1 728 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-206ENST00000420746 CSGALNACT1Q8TDX6 532 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 SMARCD2Q92925 531 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 E2F7Q96AV8 911 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 TTPALQ9BTX7 342 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 CCDC86Q9H6F5 360 aaKnown RBP10.12□□□□□ -0.79
TRIM39-206ENST00000420746 TCEAL9Q9UHQ7 104 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 RAI2Q9Y5P3 530 aa10.12□□□□□ -0.79
TRIM39-206ENST00000420746 SDK1Q7Z5N4 2213 aa10.11□□□□□ -0.79
TRIM39-206ENST00000420746 WDR27A2RRH5 827 aa10.11□□□□□ -0.79
TRIM39-206ENST00000420746 IFIT3O14879 490 aaKnown RBP10.11□□□□□ -0.79
TRIM39-206ENST00000420746 ATG13O75143 517 aa10.11□□□□□ -0.79
TRIM39-206ENST00000420746 ITGA4P13612 1032 aa10.11□□□□□ -0.79
TRIM39-206ENST00000420746 PTPN2P17706 415 aa10.11□□□□□ -0.79
TRIM39-206ENST00000420746 CTHP32929 405 aa10.11□□□□□ -0.79
TRIM39-206ENST00000420746 MLH1P40692 756 aa10.11□□□□□ -0.79
TRIM39-206ENST00000420746 SIM1P81133 766 aaPredicted RBP10.11□□□□□ -0.79
TRIM39-206ENST00000420746 PRKCEQ02156 737 aa10.11□□□□□ -0.79
TRIM39-206ENST00000420746 SPIRE1Q08AE8 756 aa10.11□□□□□ -0.79
TRIM39-206ENST00000420746 TRDNQ13061 729 aa10.11□□□□□ -0.79
TRIM39-206ENST00000420746 AP3B2Q13367 1082 aa10.11□□□□□ -0.79
TRIM39-206ENST00000420746 DRP2Q13474 957 aa10.11□□□□□ -0.79
TRIM39-206ENST00000420746 SART3Q15020 963 aaKnown RBP10.11□□□□□ -0.79
TRIM39-206ENST00000420746 PIP4P1Q86T03 277 aa10.11□□□□□ -0.79
TRIM39-206ENST00000420746 C11orf74Q86VG3 221 aa10.11□□□□□ -0.79
TRIM39-206ENST00000420746 LSM14AQ8ND56 463 aaKnown RBP10.11□□□□□ -0.79
TRIM39-206ENST00000420746 CTCFLQ8NI51 663 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms