RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 FAM114A1Q8IWE2 563 aa13.6□□□□□ -0.23
TMEM53-206ENST00000420706 TMEM192Q8IY95 271 aa13.6□□□□□ -0.23
TMEM53-206ENST00000420706 FAM186BQ8IYM0 893 aa13.6□□□□□ -0.23
TMEM53-206ENST00000420706 RPUSD2Q8IZ73 545 aaKnown RBP13.6□□□□□ -0.23
TMEM53-206ENST00000420706 LINC01599Q8WXQ3 324 aa13.6□□□□□ -0.23
TMEM53-206ENST00000420706 CNOT6LQ96LI5 555 aaKnown RBP13.6□□□□□ -0.23
TMEM53-206ENST00000420706 TRIM6Q9C030 488 aaPredicted RBP13.6□□□□□ -0.23
TMEM53-206ENST00000420706 METTL14Q9HCE5 456 aaKnown RBP13.6□□□□□ -0.23
TMEM53-206ENST00000420706 FAM105AQ9NUU6 356 aa13.6□□□□□ -0.23
TMEM53-206ENST00000420706 SNTG2Q9NY99 539 aa13.6□□□□□ -0.23
TMEM53-206ENST00000420706 PCDH10Q9P2E7 1040 aa13.6□□□□□ -0.23
TMEM53-206ENST00000420706 IPPQ9Y573 584 aa13.6□□□□□ -0.23
TMEM53-206ENST00000420706 PCDHB2Q9Y5E7 798 aa13.6□□□□□ -0.23
TMEM53-206ENST00000420706 A0A0U1RQF3 1178 aa13.59□□□□□ -0.23
TMEM53-206ENST00000420706 LRRC10BA6NIK2 292 aa13.59□□□□□ -0.23
TMEM53-206ENST00000420706 KCNJ18B7U540 433 aa13.59□□□□□ -0.23
TMEM53-206ENST00000420706 C9IYK1 514 aa13.59□□□□□ -0.23
TMEM53-206ENST00000420706 CLTAP09496 248 aa13.59□□□□□ -0.23
TMEM53-206ENST00000420706 ATP1A3P13637 1013 aa13.59□□□□□ -0.23
TMEM53-206ENST00000420706 EEF1GP26641 437 aaKnown RBP13.59□□□□□ -0.23
TMEM53-206ENST00000420706 OSTNP61366 133 aa13.59□□□□□ -0.23
TMEM53-206ENST00000420706 FAM189BP81408 668 aa13.59□□□□□ -0.23
TMEM53-206ENST00000420706 POU5F1Q01860 360 aaKnown RBP13.59□□□□□ -0.23
TMEM53-206ENST00000420706 SPAG1Q07617 926 aa13.59□□□□□ -0.23
TMEM53-206ENST00000420706 KCNJ12Q14500 433 aa13.59□□□□□ -0.23
TMEM53-206ENST00000420706 HSP90AA2PQ14568 343 aaPredicted RBP13.59□□□□□ -0.23
TMEM53-206ENST00000420706 TCP11X2Q5H9J9 407 aa13.59□□□□□ -0.23
TMEM53-206ENST00000420706 CNKSR3Q6P9H4 555 aa13.59□□□□□ -0.23
TMEM53-206ENST00000420706 BADQ92934 168 aa13.59□□□□□ -0.23
TMEM53-206ENST00000420706 ACAP3Q96P50 834 aa13.59□□□□□ -0.23
TMEM53-206ENST00000420706 TSPYL2Q9H2G4 693 aaPredicted RBP13.59□□□□□ -0.23
TMEM53-206ENST00000420706 RNF39Q9H2S5 420 aa13.59□□□□□ -0.23
TMEM53-206ENST00000420706 RPF1Q9H9Y2 349 aaKnown RBP13.59□□□□□ -0.23
TMEM53-206ENST00000420706 MAGEC2Q9UBF1 373 aaPredicted RBP13.59□□□□□ -0.23
TMEM53-206ENST00000420706 HES2Q9Y543 173 aa13.59□□□□□ -0.23
TMEM53-206ENST00000420706 BRCA2P51587 3418 aa13.58□□□□□ -0.24
TMEM53-206ENST00000420706 FSD2A1L4K1 749 aa13.58□□□□□ -0.24
TMEM53-206ENST00000420706 SKIP12755 728 aa13.58□□□□□ -0.24
TMEM53-206ENST00000420706 SYN1P17600 705 aa13.58□□□□□ -0.24
TMEM53-206ENST00000420706 RAB27AP51159 221 aa13.58□□□□□ -0.24
TMEM53-206ENST00000420706 CYP24A1Q07973 514 aa13.58□□□□□ -0.24
TMEM53-206ENST00000420706 GSE1Q14687 1217 aa13.58□□□□□ -0.24
TMEM53-206ENST00000420706 ENOX2Q16206 610 aaKnown RBP13.58□□□□□ -0.24
TMEM53-206ENST00000420706 SLC10A6Q3KNW5 377 aa13.58□□□□□ -0.24
TMEM53-206ENST00000420706 SLC24A5Q71RS6 500 aa13.58□□□□□ -0.24
TMEM53-206ENST00000420706 INTS8Q75QN2 995 aaKnown RBP13.58□□□□□ -0.24
TMEM53-206ENST00000420706 ECHDC2Q86YB7 292 aa13.58□□□□□ -0.24
TMEM53-206ENST00000420706 BRSK2Q8IWQ3 736 aa13.58□□□□□ -0.24
TMEM53-206ENST00000420706 PLEKHO2Q8TD55 490 aa13.58□□□□□ -0.24
TMEM53-206ENST00000420706 CCDC94Q9BW85 323 aaPredicted RBP13.58□□□□□ -0.24
TMEM53-206ENST00000420706 NXF3Q9H4D5 531 aaKnown RBP13.58□□□□□ -0.24
TMEM53-206ENST00000420706 IL23AQ9NPF7 189 aa13.58□□□□□ -0.24
TMEM53-206ENST00000420706 C1orf112Q9NSG2 853 aa13.58□□□□□ -0.24
TMEM53-206ENST00000420706 ARMCX3Q9UH62 379 aaPredicted RBP13.58□□□□□ -0.24
TMEM53-206ENST00000420706 LIMA1Q9UHB6 759 aaKnown RBP13.58□□□□□ -0.24
TMEM53-206ENST00000420706 ZMYND8Q9ULU4 1186 aaPredicted RBP13.58□□□□□ -0.24
TMEM53-206ENST00000420706 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.57□□□□□ -0.24
TMEM53-206ENST00000420706 GOLGA6L3A6NEY3 463 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 LACTBL1A8MY62 500 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 MEFVO15553 781 aaPredicted RBP13.57□□□□□ -0.24
TMEM53-206ENST00000420706 PFKMP08237 780 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 ACRP10323 421 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 ITGA4P13612 1032 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 KRT13P13646 458 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 AKAP5P24588 427 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 MTIF2P46199 727 aaKnown RBP13.57□□□□□ -0.24
TMEM53-206ENST00000420706 VAMP7P51809 220 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 WNT7BP56706 349 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 ENPEPQ07075 957 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 BFSP1Q12934 665 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 PPIGQ13427 754 aaKnown RBP eCLIP13.57□□□□□ -0.24
TMEM53-206ENST00000420706 IKBKEQ14164 716 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 PSMD6Q15008 389 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 KRT31Q15323 416 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 SURF1Q15526 300 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 ALKAL1Q6UXT8 129 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 C16orf59Q7L2K0 433 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 APTXQ7Z2E3 356 aaKnown RBP13.57□□□□□ -0.24
TMEM53-206ENST00000420706 ZNF598Q86UK7 904 aaKnown RBP13.57□□□□□ -0.24
TMEM53-206ENST00000420706 TRIM59Q8IWR1 403 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 TMC2Q8TDI7 906 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 PARD3BQ8TEW8 1205 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 TUBGCP2Q9BSJ2 902 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 APOL6Q9BWW8 343 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 RBAKQ9NYW8 714 aaPredicted RBP13.57□□□□□ -0.24
TMEM53-206ENST00000420706 PARP2Q9UGN5 583 aa13.57□□□□□ -0.24
TMEM53-206ENST00000420706 ABHD14A-ACY1A0A1B0GW23 586 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 TTC26A0AVF1 554 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 MEIS3P2A8K0S8 358 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 RECQL4O94761 1208 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 EOMESO95936 686 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 CXCL8P10145 99 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 ATF7P17544 494 aaPredicted RBP13.56□□□□□ -0.24
TMEM53-206ENST00000420706 COPB1P53618 953 aaKnown RBP13.56□□□□□ -0.24
TMEM53-206ENST00000420706 YARSP54577 528 aaKnown RBP13.56□□□□□ -0.24
TMEM53-206ENST00000420706 DLG4P78352 724 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 FANCCQ00597 558 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 FPGSQ05932 587 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 C1orf220Q5T0J3 134 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 AGMOQ6ZNB7 445 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms