RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 GPR149Q86SP6 731 aa23.5■■□□□ 1.35
PTPN4-202ENST00000420482 UBALD2Q8IYN6 164 aa23.5■■□□□ 1.35
PTPN4-202ENST00000420482 RNF168Q8IYW5 571 aaPredicted RBP23.5■■□□□ 1.35
PTPN4-202ENST00000420482 GSTCDQ8NEC7 633 aa23.5■■□□□ 1.35
PTPN4-202ENST00000420482 TIPINQ9BVW5 301 aa23.5■■□□□ 1.35
PTPN4-202ENST00000420482 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.5■■□□□ 1.35
PTPN4-202ENST00000420482 SNTG2Q9NY99 539 aa23.5■■□□□ 1.35
PTPN4-202ENST00000420482 KCNG1Q9UIX4 513 aa23.5■■□□□ 1.35
PTPN4-202ENST00000420482 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.5■■□□□ 1.35
PTPN4-202ENST00000420482 SF3B1O75533 1304 aaKnown RBP eCLIP23.5■■□□□ 1.359e-6■■■■■ 68.9
PTPN4-202ENST00000420482 C2CD4DB7Z1M9 353 aa23.49■■□□□ 1.35
PTPN4-202ENST00000420482 WEE2P0C1S8 567 aa23.49■■□□□ 1.35
PTPN4-202ENST00000420482 GJB2P29033 226 aa23.49■■□□□ 1.35
PTPN4-202ENST00000420482 DMP1Q13316 513 aaPredicted RBP23.49■■□□□ 1.35
PTPN4-202ENST00000420482 ECM1Q16610 540 aa23.49■■□□□ 1.35
PTPN4-202ENST00000420482 ZDHHC14Q8IZN3 488 aa23.49■■□□□ 1.35
PTPN4-202ENST00000420482 HDAC7Q8WUI4 952 aa23.49■■□□□ 1.35
PTPN4-202ENST00000420482 PRRX2Q99811 253 aa23.49■■□□□ 1.35
PTPN4-202ENST00000420482 NT5C3AQ9H0P0 336 aa23.49■■□□□ 1.35
PTPN4-202ENST00000420482 C17orf75Q9HAS0 396 aa23.49■■□□□ 1.35
PTPN4-202ENST00000420482 RXFP1Q9HBX9 757 aa23.49■■□□□ 1.35
PTPN4-202ENST00000420482 CHST7Q9NS84 486 aa23.49■■□□□ 1.35
PTPN4-202ENST00000420482 SORCS3Q9UPU3 1222 aa23.49■■□□□ 1.35
PTPN4-202ENST00000420482 SMC3Q9UQE7 1217 aa23.49■■□□□ 1.35
PTPN4-202ENST00000420482 CCDC169A6NNP5 214 aa23.48■■□□□ 1.35
PTPN4-202ENST00000420482 TEX28O15482 410 aa23.48■■□□□ 1.35
PTPN4-202ENST00000420482 RECQL4O94761 1208 aa23.48■■□□□ 1.35
PTPN4-202ENST00000420482 EFEMP2O95967 443 aa23.48■■□□□ 1.35
PTPN4-202ENST00000420482 ELAVL2Q12926 359 aaKnown RBP23.48■■□□□ 1.35
PTPN4-202ENST00000420482 ATF7IP2Q5U623 682 aa23.48■■□□□ 1.35
PTPN4-202ENST00000420482 OTOP3Q7RTS5 596 aa23.48■■□□□ 1.35
PTPN4-202ENST00000420482 TAS1R1Q7RTX1 841 aa23.48■■□□□ 1.35
PTPN4-202ENST00000420482 CMASQ8NFW8 434 aaPredicted RBP23.48■■□□□ 1.35
PTPN4-202ENST00000420482 CDK5RAP3Q96JB5 506 aa23.48■■□□□ 1.35
PTPN4-202ENST00000420482 MAN1C1Q9NR34 630 aa23.48■■□□□ 1.35
PTPN4-202ENST00000420482 CDH22Q9UJ99 828 aa23.48■■□□□ 1.35
PTPN4-202ENST00000420482 RBM19Q9Y4C8 960 aaKnown RBP23.48■■□□□ 1.35
PTPN4-202ENST00000420482 E9PMD0 336 aa23.47■■□□□ 1.35
PTPN4-202ENST00000420482 FBXL6Q8N531 539 aa23.47■■□□□ 1.35
PTPN4-202ENST00000420482 KREMEN2Q8NCW0 462 aa23.47■■□□□ 1.35
PTPN4-202ENST00000420482 KIFC3Q9BVG8 833 aa23.47■■□□□ 1.35
PTPN4-202ENST00000420482 PLEKHA4Q9H4M7 779 aa23.47■■□□□ 1.35
PTPN4-202ENST00000420482 FNIP2Q9P278 1114 aa23.47■■□□□ 1.35
PTPN4-202ENST00000420482 YARSP54577 528 aaKnown RBP23.46■■□□□ 1.35
PTPN4-202ENST00000420482 PEX3P56589 373 aa23.46■■□□□ 1.35
PTPN4-202ENST00000420482 ATP2C1P98194 919 aaPredicted RBP23.46■■□□□ 1.35
PTPN4-202ENST00000420482 ZRSR1Q15695 479 aaKnown RBP23.46■■□□□ 1.35
PTPN4-202ENST00000420482 ARL6IP4Q66PJ3 421 aaKnown RBP23.46■■□□□ 1.35
PTPN4-202ENST00000420482 PDXDC1Q6P996 788 aa23.46■■□□□ 1.35
PTPN4-202ENST00000420482 PRSS33Q8NF86 280 aa23.46■■□□□ 1.35
PTPN4-202ENST00000420482 RIN2Q8WYP3 895 aaPredicted RBP23.46■■□□□ 1.35
PTPN4-202ENST00000420482 STAMQ92783 540 aa23.46■■□□□ 1.35
PTPN4-202ENST00000420482 GPR62Q9BZJ7 368 aa23.46■■□□□ 1.35
PTPN4-202ENST00000420482 TMEM134Q9H6X4 195 aa23.46■■□□□ 1.35
PTPN4-202ENST00000420482 MYO10Q9HD67 2058 aa23.46■■□□□ 1.35
PTPN4-202ENST00000420482 KMT5AQ9NQR1 393 aa23.46■■□□□ 1.35
PTPN4-202ENST00000420482 TOPORSQ9NS56 1045 aaPredicted RBP23.46■■□□□ 1.35
PTPN4-202ENST00000420482 TNFSF13BQ9Y275 285 aa23.46■■□□□ 1.35
PTPN4-202ENST00000420482 GDAQ9Y2T3 454 aa23.46■■□□□ 1.35
PTPN4-202ENST00000420482 CASTOR2A6NHX0 329 aa23.45■■□□□ 1.34
PTPN4-202ENST00000420482 TTLL13PA6NNM8 815 aa23.45■■□□□ 1.34
PTPN4-202ENST00000420482 PP2D1A8MPX8 630 aa23.45■■□□□ 1.34
PTPN4-202ENST00000420482 HIP1RO75146 1068 aa23.45■■□□□ 1.34
PTPN4-202ENST00000420482 NPTX2P47972 431 aa23.45■■□□□ 1.34
PTPN4-202ENST00000420482 KANK3Q6NY19 840 aa23.45■■□□□ 1.34
PTPN4-202ENST00000420482 MRPL4Q9BYD3 311 aaKnown RBP23.45■■□□□ 1.34
PTPN4-202ENST00000420482 RHOBTB2Q9BYZ6 727 aa23.45■■□□□ 1.34
PTPN4-202ENST00000420482 CCDC195A0A1B0GUA6 201 aa23.44■■□□□ 1.34
PTPN4-202ENST00000420482 F8W810 466 aa23.44■■□□□ 1.34
PTPN4-202ENST00000420482 PTGESO14684 152 aa23.44■■□□□ 1.34
PTPN4-202ENST00000420482 LARP1BQ659C4 914 aaKnown RBP23.44■■□□□ 1.34
PTPN4-202ENST00000420482 RINT1Q6NUQ1 792 aa23.44■■□□□ 1.34
PTPN4-202ENST00000420482 TTPALQ9BTX7 342 aa23.44■■□□□ 1.34
PTPN4-202ENST00000420482 CCDC94Q9BW85 323 aaPredicted RBP23.44■■□□□ 1.34
PTPN4-202ENST00000420482 POLD4Q9HCU8 107 aa23.44■■□□□ 1.34
PTPN4-202ENST00000420482 KCND2Q9NZV8 630 aa23.44■■□□□ 1.34
PTPN4-202ENST00000420482 CACNA1HO95180 2353 aa23.43■■□□□ 1.34
PTPN4-202ENST00000420482 DENND4AQ7Z401 1863 aa23.43■■□□□ 1.34
PTPN4-202ENST00000420482 VWA3AA6NCI4 1184 aa23.43■■□□□ 1.34
PTPN4-202ENST00000420482 GUCY2CP25092 1073 aa23.43■■□□□ 1.34
PTPN4-202ENST00000420482 CDC25AP30304 524 aa23.43■■□□□ 1.34
PTPN4-202ENST00000420482 SMTNP53814 917 aa23.43■■□□□ 1.34
PTPN4-202ENST00000420482 STRN3Q13033 797 aa23.43■■□□□ 1.34
PTPN4-202ENST00000420482 IL17AQ16552 155 aa23.43■■□□□ 1.34
PTPN4-202ENST00000420482 NT5DC1Q5TFE4 455 aa23.43■■□□□ 1.34
PTPN4-202ENST00000420482 EEF1DP3Q658K8 133 aa23.43■■□□□ 1.34
PTPN4-202ENST00000420482 PALB2Q86YC2 1186 aa23.43■■□□□ 1.34
PTPN4-202ENST00000420482 UROC1Q96N76 676 aa23.43■■□□□ 1.34
PTPN4-202ENST00000420482 TCHPQ9BT92 498 aa23.43■■□□□ 1.34
PTPN4-202ENST00000420482 PIDD1Q9HB75 910 aa23.43■■□□□ 1.34
PTPN4-202ENST00000420482 ZDHHC7Q9NXF8 308 aa23.43■■□□□ 1.34
PTPN4-202ENST00000420482 LIMD1Q9UGP4 676 aa23.43■■□□□ 1.34
PTPN4-202ENST00000420482 SLC26A4O43511 780 aa23.42■■□□□ 1.34
PTPN4-202ENST00000420482 BMP15O95972 392 aa23.42■■□□□ 1.34
PTPN4-202ENST00000420482 PTPN5P54829 565 aa23.42■■□□□ 1.34
PTPN4-202ENST00000420482 ZNF568Q3ZCX4 644 aa23.42■■□□□ 1.34
PTPN4-202ENST00000420482 HYIQ5T013 277 aa23.42■■□□□ 1.34
PTPN4-202ENST00000420482 FAM171A1Q5VUB5 890 aa23.42■■□□□ 1.34
PTPN4-202ENST00000420482 C1orf186Q6ZWK4 172 aa23.42■■□□□ 1.34
PTPN4-202ENST00000420482 CEP57Q86XR8 500 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms