RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 IRF2BP2Q7Z5L9 587 aa6.54□□□□□ -1.36
CHD2-202ENST00000420239 ADGRA1Q86SQ6 560 aa6.54□□□□□ -1.36
CHD2-202ENST00000420239 NT5DC3Q86UY8 548 aa6.54□□□□□ -1.36
CHD2-202ENST00000420239 LCA5Q86VQ0 697 aa6.54□□□□□ -1.36
CHD2-202ENST00000420239 SESTD1Q86VW0 696 aa6.54□□□□□ -1.36
CHD2-202ENST00000420239 JAMLQ86YT9 394 aa6.54□□□□□ -1.36
CHD2-202ENST00000420239 MYLK4Q86YV6 388 aaPredicted RBP6.54□□□□□ -1.36
CHD2-202ENST00000420239 KIAA0825Q8IV33 1275 aa6.54□□□□□ -1.36
CHD2-202ENST00000420239 ANKRD42Q8N9B4 389 aa6.54□□□□□ -1.36
CHD2-202ENST00000420239 SDR42E1Q8WUS8 393 aa6.54□□□□□ -1.36
CHD2-202ENST00000420239 DYDC1Q8WWB3 177 aa6.54□□□□□ -1.36
CHD2-202ENST00000420239 GLG1Q92896 1179 aa6.54□□□□□ -1.36
CHD2-202ENST00000420239 OPTNQ96CV9 577 aa6.54□□□□□ -1.36
CHD2-202ENST00000420239 HES6Q96HZ4 224 aa6.54□□□□□ -1.36
CHD2-202ENST00000420239 TSG101Q99816 390 aa6.54□□□□□ -1.36
CHD2-202ENST00000420239 SLX1AQ9BQ83 275 aa6.54□□□□□ -1.36
CHD2-202ENST00000420239 ERP44Q9BS26 406 aa6.54□□□□□ -1.36
CHD2-202ENST00000420239 LRRC27Q9C0I9 530 aa6.54□□□□□ -1.36
CHD2-202ENST00000420239 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.54□□□□□ -1.36
CHD2-202ENST00000420239 HAO1Q9UJM8 370 aa6.54□□□□□ -1.36
CHD2-202ENST00000420239 RTCBQ9Y3I0 505 aaKnown RBP6.54□□□□□ -1.36
CHD2-202ENST00000420239 COL4A3BPQ9Y5P4 624 aa6.54□□□□□ -1.36
CHD2-202ENST00000420239 ZNF804BA4D1E1 1349 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 PFASO15067 1338 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 RASGRF2O14827 1237 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 DDX3YO15523 660 aaKnown RBP6.53□□□□□ -1.36
CHD2-202ENST00000420239 ECE2O60344 883 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 GFPT2O94808 682 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 FGGP02679 453 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 SETSIPP0DME0 302 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 ABCD1P33897 745 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 PTGIRP43119 386 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 MAGEA10P43363 369 aaPredicted RBP6.53□□□□□ -1.36
CHD2-202ENST00000420239 SESN3P58005 492 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 FKBP3Q00688 224 aaKnown RBP6.53□□□□□ -1.36
CHD2-202ENST00000420239 TMEM62Q0P6H9 643 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 GRM4Q14833 912 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 INTS6LQ5JSJ4 861 aaKnown RBP6.53□□□□□ -1.36
CHD2-202ENST00000420239 SOGA3Q5TF21 947 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 KRT25Q7Z3Z0 450 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 PEX26Q7Z412 305 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 ADAT2Q7Z6V5 191 aaKnown RBP6.53□□□□□ -1.36
CHD2-202ENST00000420239 KBTBD2Q8IY47 623 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 SYCE1Q8N0S2 351 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 MIGA1Q8NAN2 632 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 SH3TC2Q8TF17 1288 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 GATA6Q92908 595 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 ERP27Q96DN0 273 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 PNMA5Q96PV4 448 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 TGS1Q96RS0 853 aaKnown RBP6.53□□□□□ -1.36
CHD2-202ENST00000420239 KCTD15Q96SI1 283 aaPredicted RBP6.53□□□□□ -1.36
CHD2-202ENST00000420239 TBC1D10AQ9BXI6 508 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 TANGO6Q9C0B7 1094 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 KIAA1683Q9H0B3 1180 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 GALNT8Q9NY28 637 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 CHKBQ9Y259 395 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 DAAM1Q9Y4D1 1078 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 SCN7AQ01118 1682 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 ANKRD63C9JTQ0 380 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 KRT36O76013 467 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 MYCP01106 439 aaPredicted RBP6.53□□□□□ -1.36
CHD2-202ENST00000420239 P4HBP07237 508 aaKnown RBP6.53□□□□□ -1.36
CHD2-202ENST00000420239 FOXN2P32314 431 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 IGHMBP2P38935 993 aaKnown RBP6.53□□□□□ -1.36
CHD2-202ENST00000420239 VHLP40337 213 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 RPL21P46778 160 aaKnown RBP6.53□□□□□ -1.36
CHD2-202ENST00000420239 SCNN1DP51172 638 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 POLGP54098 1239 aaPredicted RBP6.53□□□□□ -1.36
CHD2-202ENST00000420239 OCRLQ01968 901 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 MCL1Q07820 350 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 DHX34Q14147 1143 aaKnown RBP6.53□□□□□ -1.36
CHD2-202ENST00000420239 GIT2Q14161 759 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 MTFR1Q15390 333 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 CLUL1Q15846 466 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 LONRF1Q17RB8 773 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 INF2Q27J81 1249 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 ZNF568Q3ZCX4 644 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 CERKLQ49MI3 558 aaPredicted RBP6.53□□□□□ -1.36
CHD2-202ENST00000420239 CCDC152Q4G0S7 254 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 TMEM119Q4V9L6 283 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 TJAP1Q5JTD0 557 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 KIAA1755Q5JYT7 1200 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 ACBD5Q5T8D3 534 aaPredicted RBP6.53□□□□□ -1.36
CHD2-202ENST00000420239 BICDL1Q6ZP65 573 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 FAM47EQ6ZV65 393 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 INTS8Q75QN2 995 aaKnown RBP6.53□□□□□ -1.36
CHD2-202ENST00000420239 TAOK1Q7L7X3 1001 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 ZC3H18Q86VM9 953 aaKnown RBP6.53□□□□□ -1.36
CHD2-202ENST00000420239 DGKHQ86XP1 1220 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 OLIG1Q8TAK6 271 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 INPP5DQ92835 1189 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 COL26A1Q96A83 441 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 CALML4Q96GE6 196 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 GBP5Q96PP8 586 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 ROPN1BQ9BZX4 212 aaPredicted RBP6.53□□□□□ -1.36
CHD2-202ENST00000420239 FAM192AQ9GZU8 254 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 STMN4Q9H169 189 aaPredicted RBP6.53□□□□□ -1.36
CHD2-202ENST00000420239 CARD9Q9H257 536 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 DHX36Q9H2U1 1008 aaKnown RBP6.53□□□□□ -1.36
CHD2-202ENST00000420239 SUDS3Q9H7L9 328 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms