RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 TEX28O15482 410 aa12.17□□□□□ -0.46
SSBP3-206ENST00000420121 HIP1RO75146 1068 aa12.17□□□□□ -0.46
SSBP3-206ENST00000420121 SP100P23497 879 aaPredicted RBP12.17□□□□□ -0.46
SSBP3-206ENST00000420121 IGFBP6P24592 240 aaPredicted RBP12.17□□□□□ -0.46
SSBP3-206ENST00000420121 NPTX2P47972 431 aa12.17□□□□□ -0.46
SSBP3-206ENST00000420121 GLUD2P49448 558 aa12.17□□□□□ -0.46
SSBP3-206ENST00000420121 CUL4AQ13619 759 aa12.17□□□□□ -0.46
SSBP3-206ENST00000420121 KRT79Q5XKE5 535 aa12.17□□□□□ -0.46
SSBP3-206ENST00000420121 FUT10Q6P4F1 479 aa12.17□□□□□ -0.46
SSBP3-206ENST00000420121 PPFIBP1Q86W92 1011 aa12.17□□□□□ -0.46
SSBP3-206ENST00000420121 HACE1Q8IYU2 909 aa12.17□□□□□ -0.46
SSBP3-206ENST00000420121 FBXL18Q96ME1 805 aa12.17□□□□□ -0.46
SSBP3-206ENST00000420121 RAB34Q9BZG1 259 aa12.17□□□□□ -0.46
SSBP3-206ENST00000420121 PTPRHQ9HD43 1115 aa12.17□□□□□ -0.46
SSBP3-206ENST00000420121 MRPL17Q9NRX2 175 aaKnown RBP12.17□□□□□ -0.46
SSBP3-206ENST00000420121 ARHGAP28Q9P2N2 729 aa12.17□□□□□ -0.46
SSBP3-206ENST00000420121 ADAM28Q9UKQ2 775 aa12.17□□□□□ -0.46
SSBP3-206ENST00000420121 DNM3Q9UQ16 869 aa12.17□□□□□ -0.46
SSBP3-206ENST00000420121 STK24Q9Y6E0 443 aa12.17□□□□□ -0.46
SSBP3-206ENST00000420121 MYH15Q9Y2K3 1946 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 ABLIM1O14639 778 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 PAPLNO95428 1278 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 URODP06132 367 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 LIG1P18858 919 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 KLRC2P26717 231 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 PLA2G5P39877 138 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 MTHFRP42898 656 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 EFNA5P52803 228 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 PEX3P56589 373 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 TUSC3Q13454 348 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 HSP90AA2PQ14568 343 aaPredicted RBP12.16□□□□□ -0.46
SSBP3-206ENST00000420121 PTPN21Q16825 1174 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 TMEM119Q4V9L6 283 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 ATF7IP2Q5U623 682 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 ARL6IP4Q66PJ3 421 aaKnown RBP12.16□□□□□ -0.46
SSBP3-206ENST00000420121 CES5AQ6NT32 575 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 TMC5Q6UXY8 1006 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 TRIM67Q6ZTA4 783 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 BMP8AQ7Z5Y6 402 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 GPR149Q86SP6 731 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 CEP120Q8N960 986 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 ASIC4Q96FT7 647 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 IFT74Q96LB3 600 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 NECTIN4Q96NY8 510 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 ACO2Q99798 780 aaKnown RBP12.16□□□□□ -0.46
SSBP3-206ENST00000420121 COLEC11Q9BWP8 271 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 EMILIN2Q9BXX0 1053 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 UPF2Q9HAU5 1272 aaKnown RBP12.16□□□□□ -0.46
SSBP3-206ENST00000420121 SMC3Q9UQE7 1217 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 HCN4Q9Y3Q4 1203 aa12.16□□□□□ -0.46
SSBP3-206ENST00000420121 PHLPP2Q6ZVD8 1323 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 NOTCH4Q99466 2003 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 VWA3AA6NCI4 1184 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 CASTOR2A6NHX0 329 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 SFI1A8K8P3 1242 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 H3BQV1 296 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 K7ERI5 159 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 MEFVO15553 781 aaPredicted RBP12.15□□□□□ -0.46
SSBP3-206ENST00000420121 KIF4AO95239 1232 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 PROZP22891 400 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 GUCY2CP25092 1073 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 SLC12A3P55017 1021 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 GRIN1Q05586 938 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 DCAF4L1Q3SXM0 396 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 RTP2Q5QGT7 225 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 LARP1BQ659C4 914 aaKnown RBP12.15□□□□□ -0.46
SSBP3-206ENST00000420121 CD300LGQ6UXG3 332 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 CABP7Q86V35 215 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 GPR65Q8IYL9 337 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 SYT2Q8N9I0 419 aaPredicted RBP12.15□□□□□ -0.46
SSBP3-206ENST00000420121 RIPOR3Q96MK2 946 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 PPP1R10Q96QC0 940 aaKnown RBP12.15□□□□□ -0.46
SSBP3-206ENST00000420121 NTPCRQ9BSD7 190 aaKnown RBP12.15□□□□□ -0.46
SSBP3-206ENST00000420121 CDT1Q9H211 546 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 TMEM134Q9H6X4 195 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 SFXN1Q9H9B4 322 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 MAN1C1Q9NR34 630 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 TNFSF13BQ9Y275 285 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 GDAQ9Y2T3 454 aa12.15□□□□□ -0.46
SSBP3-206ENST00000420121 ANK1P16157 1881 aa12.14□□□□□ -0.47
SSBP3-206ENST00000420121 TMEM221A6NGB7 291 aa12.14□□□□□ -0.47
SSBP3-206ENST00000420121 CCDC169A6NNP5 214 aa12.14□□□□□ -0.47
SSBP3-206ENST00000420121 M0R296 226 aa12.14□□□□□ -0.47
SSBP3-206ENST00000420121 NR1I2O75469 434 aa12.14□□□□□ -0.47
SSBP3-206ENST00000420121 THP07101 528 aa12.14□□□□□ -0.47
SSBP3-206ENST00000420121 ADH1AP07327 375 aa12.14□□□□□ -0.47
SSBP3-206ENST00000420121 USP41Q3LFD5 358 aa12.14□□□□□ -0.47
SSBP3-206ENST00000420121 ARSHQ5FYA8 562 aa12.14□□□□□ -0.47
SSBP3-206ENST00000420121 XKR4Q5GH76 650 aa12.14□□□□□ -0.47
SSBP3-206ENST00000420121 ATAT1Q5SQI0 421 aa12.14□□□□□ -0.47
SSBP3-206ENST00000420121 LILRA6Q6PI73 481 aa12.14□□□□□ -0.47
SSBP3-206ENST00000420121 PRSS55Q6UWB4 352 aaPredicted RBP12.14□□□□□ -0.47
SSBP3-206ENST00000420121 ALKAL1Q6UXT8 129 aa12.14□□□□□ -0.47
SSBP3-206ENST00000420121 TMEM87AQ8NBN3 555 aa12.14□□□□□ -0.47
SSBP3-206ENST00000420121 CMASQ8NFW8 434 aaPredicted RBP12.14□□□□□ -0.47
SSBP3-206ENST00000420121 HASPINQ8TF76 798 aa12.14□□□□□ -0.47
SSBP3-206ENST00000420121 ZNF707Q96C28 371 aaPredicted RBP12.14□□□□□ -0.47
SSBP3-206ENST00000420121 DRC1Q96MC2 740 aa12.14□□□□□ -0.47
SSBP3-206ENST00000420121 PLIN2Q99541 437 aa12.14□□□□□ -0.47
SSBP3-206ENST00000420121 ADPGKQ9BRR6 497 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms