RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 ZNF564Q8TBZ8 553 aaPredicted RBP8.98□□□□□ -0.97
UBR4-206ENST00000419533 RIT2Q99578 217 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 MXRA8Q9BRK3 442 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 XIRP1Q702N8 1843 aaKnown RBP8.97□□□□□ -0.97
UBR4-206ENST00000419533 PP2D1A8MPX8 630 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 NFKBIEO00221 500 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 EVI5O60447 810 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 PLS3P13797 630 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 EIF3BP55884 814 aaKnown RBP8.97□□□□□ -0.97
UBR4-206ENST00000419533 NME3Q13232 169 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 TMEM132DQ14C87 1099 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 CDKL3Q8IVW4 592 aaPredicted RBP8.97□□□□□ -0.97
UBR4-206ENST00000419533 FMR1NBQ8N0W7 255 aaPredicted RBP8.97□□□□□ -0.97
UBR4-206ENST00000419533 RDM1Q8NG50 284 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 ASIC4Q96FT7 647 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 NUP85Q9BW27 656 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 POLD4Q9HCU8 107 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 TJP2Q9UDY2 1190 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 IL18RAPO95256 599 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 MOCS2O96007 188 aaPredicted RBP8.97□□□□□ -0.97
UBR4-206ENST00000419533 TFRCP02786 760 aaKnown RBP8.97□□□□□ -0.97
UBR4-206ENST00000419533 TTC23LQ6PF05 361 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 GLB1LQ6UWU2 654 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 TXNRD3Q86VQ6 643 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 FMO2Q99518 471 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 CCSER1Q9C0I3 900 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 RGL1Q9NZL6 768 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 STK38LQ9Y2H1 464 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 KRT37O76014 449 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 CYP2C9P11712 490 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 ATP1A3P13637 1013 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 SLC12A1Q13621 1099 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 FAM102AQ5T9C2 384 aaPredicted RBP8.97□□□□□ -0.97
UBR4-206ENST00000419533 TRIM67Q6ZTA4 783 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 ZKSCAN4Q969J2 545 aaPredicted RBP8.97□□□□□ -0.97
UBR4-206ENST00000419533 TMEM143Q96AN5 459 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 GLT1D1Q96MS3 346 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 AP1M1Q9BXS5 423 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 AGAP1Q9UPQ3 857 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 HEY1Q9Y5J3 304 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 FZD9O00144 591 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 TOM1L1O75674 476 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 TRPA1O75762 1119 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 CASP1P29466 404 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 CAV1Q03135 178 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 CCDC38Q502W7 563 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 HEATR6Q6AI08 1181 aaKnown RBP8.97□□□□□ -0.97
UBR4-206ENST00000419533 SARM1Q6SZW1 724 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 DCP1BQ8IZD4 617 aaKnown RBP8.97□□□□□ -0.97
UBR4-206ENST00000419533 TRPM4Q8TD43 1214 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 IGDCC4Q8TDY8 1250 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 GPRASP2Q96D09 838 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 CAPNS2Q96L46 248 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 IDI2Q9BXS1 227 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 Q9H521 79 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 CNOT10Q9H9A5 744 aaKnown RBP8.97□□□□□ -0.97
UBR4-206ENST00000419533 ABHD10Q9NUJ1 306 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 PARVAQ9NVD7 372 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 RASGRF2O14827 1237 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 PRKCEQ02156 737 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 GNASQ5JWF2 1037 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 CFAP61Q8NHU2 1237 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 ALKBH8Q96BT7 664 aaKnown RBP8.97□□□□□ -0.97
UBR4-206ENST00000419533 ATG4CQ96DT6 458 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 HSPBP1Q9NZL4 362 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 FAN1Q9Y2M0 1017 aa8.97□□□□□ -0.97
UBR4-206ENST00000419533 KLRG2A4D1S0 409 aaPredicted RBP8.96□□□□□ -0.97
UBR4-206ENST00000419533 SNX2O60749 519 aa8.96□□□□□ -0.97
UBR4-206ENST00000419533 PALMO75781 387 aa8.96□□□□□ -0.97
UBR4-206ENST00000419533 PRR29P0C7W0 189 aa8.96□□□□□ -0.97
UBR4-206ENST00000419533 SKIP12755 728 aa8.96□□□□□ -0.97
UBR4-206ENST00000419533 SNRPFP62306 86 aaKnown RBP8.96□□□□□ -0.97
UBR4-206ENST00000419533 ATG16L1Q676U5 607 aa8.96□□□□□ -0.97
UBR4-206ENST00000419533 PLEKHH3Q7Z736 793 aa8.96□□□□□ -0.97
UBR4-206ENST00000419533 N4BP2L2Q92802 583 aaPredicted RBP8.96□□□□□ -0.97
UBR4-206ENST00000419533 SPON2Q9BUD6 331 aa8.96□□□□□ -0.97
UBR4-206ENST00000419533 PPP1R12CQ9BZL4 782 aa8.96□□□□□ -0.97
UBR4-206ENST00000419533 ZMYND12Q9H0C1 365 aa8.96□□□□□ -0.97
UBR4-206ENST00000419533 GOLPH3LQ9H4A5 285 aa8.96□□□□□ -0.97
UBR4-206ENST00000419533 AAASQ9NRG9 546 aa8.96□□□□□ -0.97
UBR4-206ENST00000419533 PRMT7Q9NVM4 692 aaPredicted RBP8.96□□□□□ -0.97
UBR4-206ENST00000419533 GSTA4O15217 222 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 FAM163AQ96GL9 167 aaPredicted RBP8.96□□□□□ -0.98
UBR4-206ENST00000419533 HINFPQ9BQA5 517 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 EPS15L1Q9UBC2 864 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 PCDHB8Q9UN66 801 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 NHSQ6T4R5 1651 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 C17orf102A2RUQ5 167 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 NMT1P30419 496 aaKnown RBP8.96□□□□□ -0.98
UBR4-206ENST00000419533 SERPINB6P35237 376 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 BACE1P56817 501 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 YWHAHQ04917 246 aaPredicted RBP8.96□□□□□ -0.98
UBR4-206ENST00000419533 WDR72Q3MJ13 1102 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 SV2CQ496J9 727 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 GLE1Q53GS7 698 aaKnown RBP8.96□□□□□ -0.98
UBR4-206ENST00000419533 STOX1Q6ZVD7 989 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 SAMD3Q8N6K7 520 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 EPAS1Q99814 870 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 JMJD4Q9H9V9 463 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 OLA1Q9NTK5 396 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms