RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 CPSF2Q9P2I0 782 aaKnown RBP14.06□□□□□ -0.16
BDNF-208ENST00000418212 SLC12A6Q9UHW9 1150 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 CCL15-CCL14A0A0B4J2E2 113 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 TTI1O43156 1089 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 GARSP41250 739 aaKnown RBP14.06□□□□□ -0.16
BDNF-208ENST00000418212 ACTR2P61160 394 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 ASPHQ12797 758 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 CCL15Q16663 113 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 GLE1Q53GS7 698 aaKnown RBP14.06□□□□□ -0.16
BDNF-208ENST00000418212 FBXW10Q5XX13 1052 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 CBWD2Q8IUF1 395 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 ASNSD1Q9NWL6 643 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 TLK1Q9UKI8 766 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 PITPNM2Q9BZ72 1349 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 HLA-DRAP01903 254 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 ICAM1P05362 532 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 KRT3P12035 628 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 TKFCQ3LXA3 575 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 APOBEC3HQ6NTF7 200 aaKnown RBP14.06□□□□□ -0.16
BDNF-208ENST00000418212 TTI2Q6NXR4 508 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 DDX42Q86XP3 938 aaKnown RBP eCLIP14.06□□□□□ -0.16
BDNF-208ENST00000418212 LACRTQ9GZZ8 138 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 FBXL5Q9UKA1 691 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 STRIP2Q9ULQ0 834 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 TMX2Q9Y320 296 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 PMS1P54277 932 aaKnown RBP14.05□□□□□ -0.16
BDNF-208ENST00000418212 BIRC2Q13490 618 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 LRRC14Q15048 493 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 ARL13BQ3SXY8 428 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 TRIM68Q6AZZ1 485 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 ZNF449Q6P9G9 518 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 TRIM51Q9BSJ1 452 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 FAM49BQ9NUQ9 324 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 DCCP43146 1447 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 DDNO94850 711 aaPredicted RBP14.05□□□□□ -0.16
BDNF-208ENST00000418212 ZNF157P51786 506 aaPredicted RBP14.05□□□□□ -0.16
BDNF-208ENST00000418212 SOX10P56693 466 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 E2F5Q15329 346 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 SPOPLQ6IQ16 392 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 C1orf228Q6PIY5 440 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 ANKRD13AQ8IZ07 590 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 SH2D3CQ8N5H7 860 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 PPM1NQ8N819 430 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 DAGLBQ8NCG7 672 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 TMEM117Q9H0C3 514 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 SMARCAD1Q9H4L7 1026 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 TAF1DQ9H5J8 278 aaPredicted RBP14.05□□□□□ -0.16
BDNF-208ENST00000418212 PLAGL2Q9UPG8 496 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 USP20Q9Y2K6 914 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 EIF3BP55884 814 aaKnown RBP14.05□□□□□ -0.16
BDNF-208ENST00000418212 NCAPHQ15003 741 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 C6orf118Q5T5N4 469 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 RBBP8NLQ8NC74 664 aaPredicted RBP14.05□□□□□ -0.16
BDNF-208ENST00000418212 SCFD2Q8WU76 684 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 PDCD6IPQ8WUM4 868 aaKnown RBP14.05□□□□□ -0.16
BDNF-208ENST00000418212 C18orf8Q96DM3 657 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 RBM12Q9NTZ6 932 aaKnown RBP14.05□□□□□ -0.16
BDNF-208ENST00000418212 A0A087X0B3 334 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 TYW5A2RUC4 315 aaKnown RBP14.05□□□□□ -0.16
BDNF-208ENST00000418212 TMEM150BA6NC51 233 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 LCP1P13796 627 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 VCAM1P19320 739 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 ANXA13P27216 316 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 EPHB1P54762 984 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 BACE1P56817 501 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 ERVK-24P63145 666 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 HIBCHQ6NVY1 386 aaPredicted RBP14.05□□□□□ -0.16
BDNF-208ENST00000418212 ENOSF1Q7L5Y1 443 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 COG1Q8WTW3 980 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 SEMA6BQ9H3T3 888 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 L2HGDHQ9H9P8 463 aa14.05□□□□□ -0.16
BDNF-208ENST00000418212 ITIH6Q6UXX5 1313 aa14.04□□□□□ -0.16
BDNF-208ENST00000418212 WNT10BO00744 389 aa14.04□□□□□ -0.16
BDNF-208ENST00000418212 NOP14P78316 857 aaKnown RBP14.04□□□□□ -0.16
BDNF-208ENST00000418212 SNAPC2Q13487 334 aa14.04□□□□□ -0.16
BDNF-208ENST00000418212 KLHDC7AQ5VTJ3 777 aa14.04□□□□□ -0.16
BDNF-208ENST00000418212 EFCAB12Q6NXP0 572 aa14.04□□□□□ -0.16
BDNF-208ENST00000418212 CCHCR1Q8TD31 782 aa14.04□□□□□ -0.16
BDNF-208ENST00000418212 ERGIC2Q96RQ1 377 aa14.04□□□□□ -0.16
BDNF-208ENST00000418212 HMGB1P1B2RPK0 211 aaPredicted RBP14.04□□□□□ -0.16
BDNF-208ENST00000418212 MMEP08473 750 aa14.04□□□□□ -0.16
BDNF-208ENST00000418212 RPSAP08865 295 aaKnown RBP14.04□□□□□ -0.16
BDNF-208ENST00000418212 NLRP11P59045 1033 aaKnown RBP14.04□□□□□ -0.16
BDNF-208ENST00000418212 SLC12A1Q13621 1099 aa14.04□□□□□ -0.16
BDNF-208ENST00000418212 THOC5Q13769 683 aaKnown RBP14.04□□□□□ -0.16
BDNF-208ENST00000418212 FOXR1Q6PIV2 292 aa14.04□□□□□ -0.16
BDNF-208ENST00000418212 ATP6V1E2Q96A05 226 aa14.04□□□□□ -0.16
BDNF-208ENST00000418212 C9orf72Q96LT7 481 aa14.04□□□□□ -0.16
BDNF-208ENST00000418212 KLC2Q9H0B6 622 aa14.04□□□□□ -0.16
BDNF-208ENST00000418212 KIF9Q9HAQ2 790 aa14.04□□□□□ -0.16
BDNF-208ENST00000418212 FOXN3O00409 490 aaPredicted RBP14.04□□□□□ -0.16
BDNF-208ENST00000418212 ZBTB39O15060 712 aa14.04□□□□□ -0.16
BDNF-208ENST00000418212 RTN2O75298 545 aa14.04□□□□□ -0.16
BDNF-208ENST00000418212 XPAP23025 273 aaPredicted RBP14.04□□□□□ -0.16
BDNF-208ENST00000418212 SREBF1P36956 1147 aa14.04□□□□□ -0.16
BDNF-208ENST00000418212 CLCN3P51790 818 aa14.04□□□□□ -0.16
BDNF-208ENST00000418212 ARL4CP56559 192 aa14.04□□□□□ -0.16
BDNF-208ENST00000418212 PLCB4Q15147 1175 aa14.04□□□□□ -0.16
BDNF-208ENST00000418212 ZBED8Q8IZ13 594 aa14.04□□□□□ -0.16
BDNF-208ENST00000418212 ELMO3Q96BJ8 720 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms