RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 AIFM3Q96NN9 605 aa11.14□□□□□ -0.63
MDC1-202ENST00000416571 BCO2Q9BYV7 579 aa11.14□□□□□ -0.63
MDC1-202ENST00000416571 GPR62Q9BZJ7 368 aa11.14□□□□□ -0.63
MDC1-202ENST00000416571 FOXQ1Q9C009 403 aa11.14□□□□□ -0.63
MDC1-202ENST00000416571 POLIQ9UNA4 740 aa11.14□□□□□ -0.63
MDC1-202ENST00000416571 CYP46A1Q9Y6A2 500 aa11.14□□□□□ -0.63
MDC1-202ENST00000416571 FANCMQ8IYD8 2048 aa11.14□□□□□ -0.63
MDC1-202ENST00000416571 ZNF292O60281 2723 aa11.14□□□□□ -0.63
MDC1-202ENST00000416571 ZBTB39O15060 712 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 DGAT1O75907 488 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 CDKL5O76039 1030 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 PAPLNO95428 1278 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 NPTXRO95502 500 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 HNRNPA1P09651 372 aaKnown RBP eCLIP11.13□□□□□ -0.63
MDC1-202ENST00000416571 ARF4P18085 180 aaPredicted RBP11.13□□□□□ -0.63
MDC1-202ENST00000416571 MBTD1Q05BQ5 628 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 POU5F1BQ06416 359 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 HSP90AA2PQ14568 343 aaPredicted RBP11.13□□□□□ -0.63
MDC1-202ENST00000416571 UBXN2BQ14CS0 331 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 NPY5RQ15761 445 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 PPM1LQ5SGD2 360 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 LILRA6Q6PI73 481 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 PRSS55Q6UWB4 352 aaPredicted RBP11.13□□□□□ -0.63
MDC1-202ENST00000416571 PIK3AP1Q6ZUJ8 805 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 GRASPQ7Z6J2 395 aaPredicted RBP11.13□□□□□ -0.63
MDC1-202ENST00000416571 CDR2LQ86X02 465 aaPredicted RBP11.13□□□□□ -0.63
MDC1-202ENST00000416571 CEP57Q86XR8 500 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 POTEDQ86YR6 584 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 SLFN12Q8IYM2 578 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 RABGGTAQ92696 567 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 HAS1Q92839 578 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 FGF14Q92915 247 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 XPNPEP1Q9NQW7 623 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 SPATA6Q9NWH7 488 aaPredicted RBP11.13□□□□□ -0.63
MDC1-202ENST00000416571 KLK14Q9P0G3 267 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 DLGAP2Q9P1A6 1054 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 NCDNQ9UBB6 729 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 CDH7Q9ULB5 785 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 ZMYM2Q9UBW7 1377 aa11.13□□□□□ -0.63
MDC1-202ENST00000416571 UNC79Q9P2D8 2635 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 MAP1BP46821 2468 aaKnown RBP11.12□□□□□ -0.63
MDC1-202ENST00000416571 KANSL1LA0AUZ9 987 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 LAMTOR5O43504 91 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 XYLBO75191 536 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 C8AP07357 584 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 STARD6P59095 220 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 GPC5P78333 572 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 PFKPQ01813 784 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 PRKCQQ04759 706 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 TUSC3Q13454 348 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 SNW1Q13573 536 aaKnown RBP11.12□□□□□ -0.63
MDC1-202ENST00000416571 CAPSQ13938 189 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 ACAP1Q15027 740 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 PSMD5Q16401 504 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 TMEM132AQ24JP5 1023 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 FAM171A1Q5VUB5 890 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 PDXDC1Q6P996 788 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 PARM1Q6UWI2 310 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 IFNLR1Q8IU57 520 aaPredicted RBP11.12□□□□□ -0.63
MDC1-202ENST00000416571 DCLK2Q8N568 766 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 ASAP3Q8TDY4 903 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 HASPINQ8TF76 798 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 BORCS6Q96GS4 357 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 LARP6Q9BRS8 491 aaKnown RBP11.12□□□□□ -0.63
MDC1-202ENST00000416571 TTPALQ9BTX7 342 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 PHF20Q9BVI0 1012 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 ZSWIM6Q9HCJ5 1215 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 FBXW11Q9UKB1 542 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 PATJQ8NI35 1801 aa11.12□□□□□ -0.63
MDC1-202ENST00000416571 DMXL1Q9Y485 3027 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 CASTOR2A6NHX0 329 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 POTEMA6NI47 508 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 LRRIQ4A6NIV6 560 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 SPTLC1O15269 473 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 CCL16O15467 120 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 B4GALT5O43286 388 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 LRRN2O75325 713 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 SLITRK3O94933 977 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 GLULP15104 373 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 GLRA2P23416 452 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 NTHL1P78549 312 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 ELAVL2Q12926 359 aaKnown RBP11.11□□□□□ -0.63
MDC1-202ENST00000416571 MLF2Q15773 248 aaPredicted RBP11.11□□□□□ -0.63
MDC1-202ENST00000416571 AMHR2Q16671 573 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 RTP2Q5QGT7 225 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 POTEGQ6S5H5 508 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 GSTCDQ8NEC7 633 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 ATRIPQ8WXE1 791 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 PIK3R5Q8WYR1 880 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 FGF13Q92913 245 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 SECISBP2LQ93073 1101 aaKnown RBP11.11□□□□□ -0.63
MDC1-202ENST00000416571 EIF2AK1Q9BQI3 630 aaKnown RBP11.11□□□□□ -0.63
MDC1-202ENST00000416571 RPP25Q9BUL9 199 aaKnown RBP11.11□□□□□ -0.63
MDC1-202ENST00000416571 NFKBIZQ9BYH8 718 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 POLR3FQ9H1D9 316 aaPredicted RBP11.11□□□□□ -0.63
MDC1-202ENST00000416571 BRMS1Q9HCU9 246 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 ANKEF1Q9NU02 776 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 PRMT7Q9NVM4 692 aaPredicted RBP11.11□□□□□ -0.63
MDC1-202ENST00000416571 PCDHA12Q9UN75 941 aa11.11□□□□□ -0.63
MDC1-202ENST00000416571 A0A1B0GUA9 196 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms