RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 RECQL4O94761 1208 aa19.37■□□□□ 0.69
PDLIM2-208ENST00000416159 GLUD1P00367 558 aa19.37■□□□□ 0.69
PDLIM2-208ENST00000416159 ATP2C1P98194 919 aaPredicted RBP19.37■□□□□ 0.69
PDLIM2-208ENST00000416159 HSP90AA2PQ14568 343 aaPredicted RBP19.37■□□□□ 0.69
PDLIM2-208ENST00000416159 EEF1DP3Q658K8 133 aa19.37■□□□□ 0.69
PDLIM2-208ENST00000416159 C15orf39Q6ZRI6 1047 aa19.37■□□□□ 0.69
PDLIM2-208ENST00000416159 ZDHHC14Q8IZN3 488 aa19.37■□□□□ 0.69
PDLIM2-208ENST00000416159 KCTD17Q8N5Z5 321 aa19.37■□□□□ 0.69
PDLIM2-208ENST00000416159 TDRD5Q8NAT2 981 aaKnown RBP19.37■□□□□ 0.69
PDLIM2-208ENST00000416159 CMASQ8NFW8 434 aaPredicted RBP19.37■□□□□ 0.69
PDLIM2-208ENST00000416159 KIFC3Q9BVG8 833 aa19.37■□□□□ 0.69
PDLIM2-208ENST00000416159 USP20Q9Y2K6 914 aa19.37■□□□□ 0.69
PDLIM2-208ENST00000416159 ZNF318Q5VUA4 2279 aa19.36■□□□□ 0.69
PDLIM2-208ENST00000416159 PHLPP2Q6ZVD8 1323 aa19.36■□□□□ 0.69
PDLIM2-208ENST00000416159 CD2BP2O95400 341 aaKnown RBP19.36■□□□□ 0.69
PDLIM2-208ENST00000416159 EDN1P05305 212 aa19.36■□□□□ 0.69
PDLIM2-208ENST00000416159 CDC25AP30304 524 aa19.36■□□□□ 0.69
PDLIM2-208ENST00000416159 CREMQ03060 361 aa19.36■□□□□ 0.69
PDLIM2-208ENST00000416159 NT5DC1Q5TFE4 455 aa19.36■□□□□ 0.69
PDLIM2-208ENST00000416159 ATF7IP2Q5U623 682 aa19.36■□□□□ 0.69
PDLIM2-208ENST00000416159 RINT1Q6NUQ1 792 aa19.36■□□□□ 0.69
PDLIM2-208ENST00000416159 CYP26C1Q6V0L0 522 aa19.36■□□□□ 0.69
PDLIM2-208ENST00000416159 CCDC149Q6ZUS6 474 aa19.36■□□□□ 0.69
PDLIM2-208ENST00000416159 KREMEN2Q8NCW0 462 aa19.36■□□□□ 0.69
PDLIM2-208ENST00000416159 HDAC7Q8WUI4 952 aa19.36■□□□□ 0.69
PDLIM2-208ENST00000416159 MMTAG2Q9BU76 263 aaKnown RBP19.36■□□□□ 0.69
PDLIM2-208ENST00000416159 TMEM134Q9H6X4 195 aa19.36■□□□□ 0.69
PDLIM2-208ENST00000416159 MAN1C1Q9NR34 630 aa19.36■□□□□ 0.69
PDLIM2-208ENST00000416159 FNIP2Q9P278 1114 aa19.36■□□□□ 0.69
PDLIM2-208ENST00000416159 SORCS3Q9UPU3 1222 aa19.36■□□□□ 0.69
PDLIM2-208ENST00000416159 SMC3Q9UQE7 1217 aa19.36■□□□□ 0.69
PDLIM2-208ENST00000416159 MUC6Q6W4X9 2439 aa19.36■□□□□ 0.69
PDLIM2-208ENST00000416159 SF3B1O75533 1304 aaKnown RBP eCLIP19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 CCDC169A6NNP5 214 aa19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 PTGESO14684 152 aa19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 HIP1RO75146 1068 aa19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 PEX3P56589 373 aa19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 DMP1Q13316 513 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 ARL6IP4Q66PJ3 421 aaKnown RBP19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 C1orf186Q6ZWK4 172 aa19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 SUGP1Q8IWZ8 645 aaKnown RBP19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 UBALD2Q8IYN6 164 aa19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 RIN2Q8WYP3 895 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 RABGGTAQ92696 567 aa19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 ACSF2Q96CM8 615 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 ASIC4Q96FT7 647 aa19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 DRC1Q96MC2 740 aa19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 TIPINQ9BVW5 301 aa19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 RHOBTB2Q9BYZ6 727 aa19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 PLEKHA4Q9H4M7 779 aa19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 C17orf75Q9HAS0 396 aa19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 TNFSF13BQ9Y275 285 aa19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 GDAQ9Y2T3 454 aa19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 RBM19Q9Y4C8 960 aaKnown RBP19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-208ENST00000416159 MTCL1Q9Y4B5 1905 aaKnown RBP19.34■□□□□ 0.69
PDLIM2-208ENST00000416159 CASTOR2A6NHX0 329 aa19.34■□□□□ 0.69
PDLIM2-208ENST00000416159 NPTX2P47972 431 aa19.34■□□□□ 0.69
PDLIM2-208ENST00000416159 ELAVL2Q12926 359 aaKnown RBP19.34■□□□□ 0.69
PDLIM2-208ENST00000416159 MTMR3Q13615 1198 aa19.34■□□□□ 0.69
PDLIM2-208ENST00000416159 HYIQ5T013 277 aa19.34■□□□□ 0.69
PDLIM2-208ENST00000416159 OTOP3Q7RTS5 596 aa19.34■□□□□ 0.69
PDLIM2-208ENST00000416159 KCNK18Q7Z418 384 aa19.34■□□□□ 0.69
PDLIM2-208ENST00000416159 DAW1Q8N136 415 aa19.34■□□□□ 0.69
PDLIM2-208ENST00000416159 FBXL6Q8N531 539 aa19.34■□□□□ 0.69
PDLIM2-208ENST00000416159 B3GALT6Q96L58 329 aa19.34■□□□□ 0.69
PDLIM2-208ENST00000416159 TBC1D32Q96NH3 1257 aa19.34■□□□□ 0.69
PDLIM2-208ENST00000416159 PAAF1Q9BRP4 392 aa19.34■□□□□ 0.69
PDLIM2-208ENST00000416159 RUSC1Q9BVN2 902 aa19.34■□□□□ 0.69
PDLIM2-208ENST00000416159 NT5C3AQ9H0P0 336 aa19.34■□□□□ 0.69
PDLIM2-208ENST00000416159 KMT5AQ9NQR1 393 aa19.34■□□□□ 0.69
PDLIM2-208ENST00000416159 LIMD1Q9UGP4 676 aa19.34■□□□□ 0.69
PDLIM2-208ENST00000416159 KCNG1Q9UIX4 513 aa19.34■□□□□ 0.69
PDLIM2-208ENST00000416159 CCDC195A0A1B0GUA6 201 aa19.33■□□□□ 0.68
PDLIM2-208ENST00000416159 GUCY2CP25092 1073 aa19.33■□□□□ 0.68
PDLIM2-208ENST00000416159 ZRSR1Q15695 479 aaKnown RBP19.33■□□□□ 0.68
PDLIM2-208ENST00000416159 NAB2Q15742 525 aa19.33■□□□□ 0.68
PDLIM2-208ENST00000416159 LARP1BQ659C4 914 aaKnown RBP19.33■□□□□ 0.68
PDLIM2-208ENST00000416159 PALB2Q86YC2 1186 aa19.33■□□□□ 0.68
PDLIM2-208ENST00000416159 FEZF2Q8TBJ5 459 aa19.33■□□□□ 0.68
PDLIM2-208ENST00000416159 ACO2Q99798 780 aaKnown RBP19.33■□□□□ 0.68
PDLIM2-208ENST00000416159 MRPL4Q9BYD3 311 aaKnown RBP19.33■□□□□ 0.68
PDLIM2-208ENST00000416159 ARHGAP28Q9P2N2 729 aa19.33■□□□□ 0.68
PDLIM2-208ENST00000416159 CACNG4Q9UBN1 327 aa19.33■□□□□ 0.68
PDLIM2-208ENST00000416159 PLXNA3P51805 1871 aa19.33■□□□□ 0.68
PDLIM2-208ENST00000416159 VWA3AA6NCI4 1184 aa19.32■□□□□ 0.68
PDLIM2-208ENST00000416159 HOXD11P31277 338 aaPredicted RBP19.32■□□□□ 0.68
PDLIM2-208ENST00000416159 MAPK7Q13164 816 aa19.32■□□□□ 0.68
PDLIM2-208ENST00000416159 FAM171A1Q5VUB5 890 aa19.32■□□□□ 0.68
PDLIM2-208ENST00000416159 LILRA6Q6PI73 481 aa19.32■□□□□ 0.68
PDLIM2-208ENST00000416159 SYT2Q8N9I0 419 aaPredicted RBP19.32■□□□□ 0.68
PDLIM2-208ENST00000416159 CDK5RAP3Q96JB5 506 aa19.32■□□□□ 0.68
PDLIM2-208ENST00000416159 PNMA5Q96PV4 448 aa19.32■□□□□ 0.68
PDLIM2-208ENST00000416159 PRRX2Q99811 253 aa19.32■□□□□ 0.68
PDLIM2-208ENST00000416159 NTPCRQ9BSD7 190 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-208ENST00000416159 TTPALQ9BTX7 342 aa19.32■□□□□ 0.68
PDLIM2-208ENST00000416159 CCDC94Q9BW85 323 aaPredicted RBP19.32■□□□□ 0.68
PDLIM2-208ENST00000416159 CXCL16Q9H2A7 254 aa19.32■□□□□ 0.68
PDLIM2-208ENST00000416159 TRIP11Q15643 1979 aa19.32■□□□□ 0.68
PDLIM2-208ENST00000416159 C2orf16Q68DN1 1984 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms