RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 Q6ZUG5 572 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 FERMT3Q86UX7 667 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 ATRIPQ8WXE1 791 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 RABGGTAQ92696 567 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 SECISBP2LQ93073 1101 aaKnown RBP10.65□□□□□ -0.7
RFFL-203ENST00000413582 CLDN23Q96B33 292 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 CPB2Q96IY4 423 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 CEP170P1Q96L14 293 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 KXD1Q9BQD3 176 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 APOL6Q9BWW8 343 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 SLC26A6Q9BXS9 759 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 C22orf23Q9BZE7 217 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 CSRNP2Q9H175 543 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 PARD6AQ9NPB6 346 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 SH3GLB2Q9NR46 395 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 CACNG4Q9UBN1 327 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 GIT1Q9Y2X7 761 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 COL4A2P08572 1712 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 SF3B1O75533 1304 aaKnown RBP eCLIP10.64□□□□□ -0.718e-6■■■■■ 107
RFFL-203ENST00000413582 DCDC2BA2VCK2 349 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 M0R2N6 131 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 SLC37A4O43826 429 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 CDC45O75419 566 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 C8AP07357 584 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 IFNAR1P17181 557 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 CD72P21854 359 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 TARSP26639 723 aaKnown RBP10.64□□□□□ -0.71
RFFL-203ENST00000413582 HOXA9P31269 272 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 NLRP5P59047 1200 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 PTENP60484 403 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 PFKPQ01813 784 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 GRIK3Q13003 919 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 NPY5RQ15761 445 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 AMHR2Q16671 573 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 LIN9Q5TKA1 542 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 NPAS3Q8IXF0 933 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 EXOC8Q8IYI6 725 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 ITFG1Q8TB96 612 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 TCP11Q8WWU5 503 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 CLSTN3Q9BQT9 956 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 RTKNQ9BST9 563 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 XPNPEP1Q9NQW7 623 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 DDX25Q9UHL0 483 aaKnown RBP10.64□□□□□ -0.71
RFFL-203ENST00000413582 PCDHA4Q9UN74 947 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 FAM208BQ5VWN6 2430 aa10.64□□□□□ -0.71
RFFL-203ENST00000413582 SHISA7A6NL88 538 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 CCL16O15467 120 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 ASAP2O43150 1006 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 DKC1O60832 514 aaKnown RBP eCLIP10.63□□□□□ -0.71
RFFL-203ENST00000413582 P4HBP07237 508 aaKnown RBP10.63□□□□□ -0.71
RFFL-203ENST00000413582 ADRB1P08588 477 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 POU2F2P09086 479 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 ARF4P18085 180 aaPredicted RBP10.63□□□□□ -0.71
RFFL-203ENST00000413582 AKAP5P24588 427 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 YWHABP31946 246 aaKnown RBP10.63□□□□□ -0.71
RFFL-203ENST00000413582 RPS9P46781 194 aaKnown RBP10.63□□□□□ -0.71
RFFL-203ENST00000413582 MBTD1Q05BQ5 628 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 HSP90AA2PQ14568 343 aaPredicted RBP10.63□□□□□ -0.71
RFFL-203ENST00000413582 ST3GAL2Q16842 350 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 PPM1LQ5SGD2 360 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 ZBTB41Q5SVQ8 909 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 TSSK4Q6SA08 328 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 TPRG1Q6ZUI0 275 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 C4orf19Q8IY42 314 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 FBXL16Q8N461 479 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 DAGLBQ8NCG7 672 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 PIK3R5Q8WYR1 880 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 MTRQ99707 1265 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 PAAF1Q9BRP4 392 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 LXNQ9BS40 222 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 TTPALQ9BTX7 342 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 PHF20Q9BVI0 1012 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 AGXT2Q9BYV1 514 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 TRIM6Q9C030 488 aaPredicted RBP10.63□□□□□ -0.71
RFFL-203ENST00000413582 NCOA5Q9HCD5 579 aaKnown RBP10.63□□□□□ -0.71
RFFL-203ENST00000413582 KCNMB3Q9NPA1 279 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 USP18Q9UMW8 372 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 RALGAPA1Q6GYQ0 2036 aa10.63□□□□□ -0.71
RFFL-203ENST00000413582 INO80B-WBP1J3KQ70 363 aa10.62□□□□□ -0.71
RFFL-203ENST00000413582 ADAM12O43184 909 aa10.62□□□□□ -0.71
RFFL-203ENST00000413582 B4GALT5O43286 388 aa10.62□□□□□ -0.71
RFFL-203ENST00000413582 TBC1D4O60343 1298 aa10.62□□□□□ -0.71
RFFL-203ENST00000413582 XYLBO75191 536 aa10.62□□□□□ -0.71
RFFL-203ENST00000413582 KIF4AO95239 1232 aa10.62□□□□□ -0.71
RFFL-203ENST00000413582 TDGF1P13385 188 aa10.62□□□□□ -0.71
RFFL-203ENST00000413582 FZD5Q13467 585 aa10.62□□□□□ -0.71
RFFL-203ENST00000413582 CAPSQ13938 189 aa10.62□□□□□ -0.71
RFFL-203ENST00000413582 MXD4Q14582 209 aaPredicted RBP10.62□□□□□ -0.71
RFFL-203ENST00000413582 PSMD5Q16401 504 aa10.62□□□□□ -0.71
RFFL-203ENST00000413582 HACE1Q8IYU2 909 aa10.62□□□□□ -0.71
RFFL-203ENST00000413582 BLIDQ8IZY5 108 aa10.62□□□□□ -0.71
RFFL-203ENST00000413582 LNX1Q8TBB1 728 aaPredicted RBP10.62□□□□□ -0.71
RFFL-203ENST00000413582 SLC7A14Q8TBB6 771 aa10.62□□□□□ -0.71
RFFL-203ENST00000413582 ASAP3Q8TDY4 903 aa10.62□□□□□ -0.71
RFFL-203ENST00000413582 HASPINQ8TF76 798 aa10.62□□□□□ -0.71
RFFL-203ENST00000413582 KCNB2Q92953 911 aa10.62□□□□□ -0.71
RFFL-203ENST00000413582 JAKMIP1Q96N16 626 aaKnown RBP10.62□□□□□ -0.71
RFFL-203ENST00000413582 BACH2Q9BYV9 841 aa10.62□□□□□ -0.71
RFFL-203ENST00000413582 HCFC1R1Q9NWW0 138 aa10.62□□□□□ -0.71
RFFL-203ENST00000413582 KLK14Q9P0G3 267 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms