RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 TRIM49P0CI25 452 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 TRIM49CP0CI26 452 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 COMTP21964 271 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 CTNNA2P26232 953 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 TARSP26639 723 aaKnown RBP9.54□□□□□ -0.88
SIK3-202ENST00000413553 COILP38432 576 aaPredicted RBP9.54□□□□□ -0.88
SIK3-202ENST00000413553 FMO5P49326 533 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 USP17L24Q0WX57 530 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 SETDB1Q15047 1291 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 RBM26Q5T8P6 1007 aaKnown RBP9.54□□□□□ -0.88
SIK3-202ENST00000413553 CIAPIN1Q6FI81 312 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 ZNF746Q6NUN9 644 aaPredicted RBP9.54□□□□□ -0.88
SIK3-202ENST00000413553 USP17L6PQ6QN14 398 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 TRMT10CQ7L0Y3 403 aaKnown RBP9.54□□□□□ -0.88
SIK3-202ENST00000413553 CATSPER3Q86XQ3 398 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 ECHDC2Q86YB7 292 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 ZFPM1Q8IX07 1006 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 ADGRF4Q8IZF3 695 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 OLIG1Q8TAK6 271 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 ERP27Q96DN0 273 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 PITPNM3Q9BZ71 974 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 VPS33BQ9H267 617 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 JMJD4Q9H9V9 463 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 SPON1Q9HCB6 807 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 PI4KBQ9UBF8 816 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 PNMA6FA0A0J9YX94 578 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 GTPBP10A4D1E9 387 aaKnown RBP9.54□□□□□ -0.88
SIK3-202ENST00000413553 DPPA5A6NC42 116 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 FAM196BA6NMK8 535 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 THAP12O43422 761 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 SPOPO43791 374 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 PPP1R11O60927 126 aaPredicted RBP9.54□□□□□ -0.88
SIK3-202ENST00000413553 DLATP10515 647 aaKnown RBP9.54□□□□□ -0.88
SIK3-202ENST00000413553 PYGMP11217 842 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 CCNB1P14635 433 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 PSMC2P35998 433 aaKnown RBP9.54□□□□□ -0.88
SIK3-202ENST00000413553 CXCL9Q07325 125 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 SNX1Q13596 522 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 TTBK2Q6IQ55 1244 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 CGB2Q6NT52 195 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 ZNF449Q6P9G9 518 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 SLC30A9Q6PML9 568 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 ARHGEF18Q6ZSZ5 1173 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 KSR1Q8IVT5 923 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 TEX9Q8N6V9 391 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 SLC20A1Q8WUM9 679 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 MYLK2Q9H1R3 596 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 GJA3Q9Y6H8 435 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 A6NHS1 94 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 ATMINO43313 823 aaPredicted RBP9.54□□□□□ -0.88
SIK3-202ENST00000413553 WFS1O76024 890 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 FTLP02792 175 aaPredicted RBP9.54□□□□□ -0.88
SIK3-202ENST00000413553 VIL1P09327 827 aaKnown RBP9.54□□□□□ -0.88
SIK3-202ENST00000413553 CYP2J2P51589 502 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 KRT17Q04695 432 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 MKRN3Q13064 507 aaKnown RBP9.54□□□□□ -0.88
SIK3-202ENST00000413553 MPP2Q14168 576 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 KYNUQ16719 465 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 CYFIP1Q7L576 1253 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 EPM2AIP1Q7L775 607 aaPredicted RBP9.54□□□□□ -0.88
SIK3-202ENST00000413553 NLGN2Q8NFZ4 835 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 ERMNQ8TAM6 284 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 UTP4Q969X6 686 aaKnown RBP9.54□□□□□ -0.88
SIK3-202ENST00000413553 NUDCD1Q96RS6 583 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 RUSC1Q9BVN2 902 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 BHMT2Q9H2M3 363 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 RNPEPL1Q9HAU8 725 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 PRKAG3Q9UGI9 489 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 HAO1Q9UJM8 370 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 PCDHA3Q9Y5H8 950 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 CHKAP35790 457 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 VPS41P49754 854 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 CLK2P49760 499 aaKnown RBP9.53□□□□□ -0.88
SIK3-202ENST00000413553 STRN3Q13033 797 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 MTFR1Q15390 333 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 TRIP13Q15645 432 aaPredicted RBP9.53□□□□□ -0.88
SIK3-202ENST00000413553 CBWD6Q4V339 395 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 PRR16Q569H4 304 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 CBWD3Q5JTY5 395 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 CBWD5Q5RIA9 395 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 RNF43Q68DV7 783 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 PPP1R18Q6NYC8 613 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 RNF207Q6ZRF8 634 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 PIGOQ8TEQ8 1089 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 C1orf54Q8WWF1 131 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 MAGEB18Q96M61 343 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 INTS2Q9H0H0 1204 aaKnown RBP9.53□□□□□ -0.88
SIK3-202ENST00000413553 ETAA1Q9NY74 926 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 APEX2Q9UBZ4 518 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 A0A1W2PRG0 241 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 DDTLA6NHG4 134 aaPredicted RBP9.53□□□□□ -0.88
SIK3-202ENST00000413553 GGPS1O95749 300 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 SLURP2P0DP57 97 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 GNAT1P11488 350 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 AKR1B1P15121 316 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 CALB2P22676 271 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 SKIV2L2P42285 1042 aaKnown RBP9.53□□□□□ -0.88
SIK3-202ENST00000413553 PTGER2P43116 358 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 CCNG1P51959 295 aa9.53□□□□□ -0.88
SIK3-202ENST00000413553 RWDD2BP57060 319 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms