RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 C21orf2O43822 256 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 RARGP13631 454 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 EIF2AK2P19525 551 aaKnown RBP16.06■□□□□ 0.16
TTC39A-208ENST00000413473 CNGA1P29973 690 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 NCKAP1LP55160 1127 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 RWDD2BP57060 319 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 SNRPFP62306 86 aaKnown RBP16.06■□□□□ 0.16
TTC39A-208ENST00000413473 PLCB4Q15147 1175 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 SPDYE2Q495Y8 402 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 PCNX4Q63HM2 1172 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 OGFOD1Q8N543 542 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 TAS1R2Q8TE23 839 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 ART4Q93070 314 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 CEP89Q96ST8 783 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 TOPORSQ9NS56 1045 aaPredicted RBP16.06■□□□□ 0.16
TTC39A-208ENST00000413473 TBX20Q9UMR3 447 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 PLSCR1O15162 318 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 RIPK2O43353 540 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 ATP9AO75110 1047 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 ATP2C2O75185 946 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 CDR2Q01850 454 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 ADCY2Q08462 1091 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 SLMAPQ14BN4 828 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 ANKRD20A8PQ5CZ79 823 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 CCDC25Q86WR0 208 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 DHX38Q92620 1227 aaKnown RBP16.06■□□□□ 0.16
TTC39A-208ENST00000413473 ZNF317Q96PQ6 595 aaPredicted RBP16.06■□□□□ 0.16
TTC39A-208ENST00000413473 TAAR1Q96RJ0 339 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 TAOK3Q9H2K8 898 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 ACTR5Q9H9F9 607 aaPredicted RBP16.06■□□□□ 0.16
TTC39A-208ENST00000413473 TBC1D22BQ9NU19 505 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 PASKQ96RG2 1323 aa16.06■□□□□ 0.16
TTC39A-208ENST00000413473 CLDN3O15551 220 aa16.05■□□□□ 0.16
TTC39A-208ENST00000413473 TBC1D12O60347 775 aa16.05■□□□□ 0.16
TTC39A-208ENST00000413473 PDE6CP51160 858 aa16.05■□□□□ 0.16
TTC39A-208ENST00000413473 MCF2L2Q86YR7 1114 aa16.05■□□□□ 0.16
TTC39A-208ENST00000413473 C4orf19Q8IY42 314 aa16.05■□□□□ 0.16
TTC39A-208ENST00000413473 SUPT20HQ8NEM7 779 aa16.05■□□□□ 0.16
TTC39A-208ENST00000413473 SYTL5Q8TDW5 730 aaPredicted RBP16.05■□□□□ 0.16
TTC39A-208ENST00000413473 ATXN2LQ8WWM7 1075 aaKnown RBP16.05■□□□□ 0.16
TTC39A-208ENST00000413473 ZNF341Q9BYN7 854 aa16.05■□□□□ 0.16
TTC39A-208ENST00000413473 RAVER2Q9HCJ3 691 aaKnown RBP16.05■□□□□ 0.16
TTC39A-208ENST00000413473 UVRAGQ9P2Y5 699 aa16.05■□□□□ 0.16
TTC39A-208ENST00000413473 RASSF9O75901 435 aa16.05■□□□□ 0.16
TTC39A-208ENST00000413473 AGTP01019 485 aa16.05■□□□□ 0.16
TTC39A-208ENST00000413473 CALCAP01258 141 aa16.05■□□□□ 0.16
TTC39A-208ENST00000413473 MYCLP12524 364 aaPredicted RBP16.05■□□□□ 0.16
TTC39A-208ENST00000413473 SF3A3Q12874 501 aaKnown RBP eCLIP16.05■□□□□ 0.16
TTC39A-208ENST00000413473 PPP1R7Q15435 360 aa16.05■□□□□ 0.16
TTC39A-208ENST00000413473 RNF207Q6ZRF8 634 aa16.05■□□□□ 0.16
TTC39A-208ENST00000413473 TMEM161BQ8NDZ6 487 aa16.05■□□□□ 0.16
TTC39A-208ENST00000413473 C1orf54Q8WWF1 131 aa16.05■□□□□ 0.16
TTC39A-208ENST00000413473 NT5C1BQ96P26 610 aa16.05■□□□□ 0.16
TTC39A-208ENST00000413473 SLC40A1Q9NP59 571 aa16.05■□□□□ 0.16
TTC39A-208ENST00000413473 KLC4Q9NSK0 619 aa16.05■□□□□ 0.16
TTC39A-208ENST00000413473 EXOC7Q9UPT5 735 aa16.05■□□□□ 0.16
TTC39A-208ENST00000413473 COQ4Q9Y3A0 265 aa16.05■□□□□ 0.16
TTC39A-208ENST00000413473 RASGRF2O14827 1237 aa16.04■□□□□ 0.16
TTC39A-208ENST00000413473 DLATP10515 647 aaKnown RBP16.04■□□□□ 0.16
TTC39A-208ENST00000413473 NPTX2P47972 431 aa16.04■□□□□ 0.16
TTC39A-208ENST00000413473 GPC3P51654 580 aa16.04■□□□□ 0.16
TTC39A-208ENST00000413473 PSMC5P62195 406 aa16.04■□□□□ 0.16
TTC39A-208ENST00000413473 SWT1Q5T5J6 900 aaKnown RBP16.04■□□□□ 0.16
TTC39A-208ENST00000413473 CYFIP1Q7L576 1253 aa16.04■□□□□ 0.16
TTC39A-208ENST00000413473 FBXL13Q8NEE6 735 aa16.04■□□□□ 0.16
TTC39A-208ENST00000413473 DDX1Q92499 740 aaKnown RBP16.04■□□□□ 0.16
TTC39A-208ENST00000413473 GMLQ99445 158 aa16.04■□□□□ 0.16
TTC39A-208ENST00000413473 TMEM8AQ9HCN3 771 aa16.04■□□□□ 0.16
TTC39A-208ENST00000413473 INTS9Q9NV88 658 aaKnown RBP16.04■□□□□ 0.16
TTC39A-208ENST00000413473 RAB20Q9NX57 234 aa16.04■□□□□ 0.16
TTC39A-208ENST00000413473 DENND3A2RUS2 1198 aa16.04■□□□□ 0.16
TTC39A-208ENST00000413473 GRIN3BO60391 1043 aa16.04■□□□□ 0.16
TTC39A-208ENST00000413473 ECEL1O95672 775 aa16.04■□□□□ 0.16
TTC39A-208ENST00000413473 CCNE2O96020 404 aa16.04■□□□□ 0.16
TTC39A-208ENST00000413473 ASNSP08243 561 aa16.04■□□□□ 0.16
TTC39A-208ENST00000413473 HSPA1LP34931 641 aa16.04■□□□□ 0.16
TTC39A-208ENST00000413473 CALCOCO2Q13137 446 aa16.04■□□□□ 0.16
TTC39A-208ENST00000413473 AUHQ13825 339 aaKnown RBP16.04■□□□□ 0.16
TTC39A-208ENST00000413473 ACAD10Q6JQN1 1059 aa16.04■□□□□ 0.16
TTC39A-208ENST00000413473 PSPC1Q8WXF1 523 aaKnown RBP16.04■□□□□ 0.16
TTC39A-208ENST00000413473 RUNDC3BQ96NL0 473 aa16.04■□□□□ 0.16
TTC39A-208ENST00000413473 TMEM109Q9BVC6 243 aa16.04■□□□□ 0.16
TTC39A-208ENST00000413473 TIPINQ9BVW5 301 aa16.04■□□□□ 0.16
TTC39A-208ENST00000413473 CCDC113Q9H0I3 377 aa16.04■□□□□ 0.16
TTC39A-208ENST00000413473 LRRC19Q9H756 370 aa16.04■□□□□ 0.16
TTC39A-208ENST00000413473 SCTRP47872 440 aa16.03■□□□□ 0.16
TTC39A-208ENST00000413473 RPS6P62753 249 aaKnown RBP16.03■□□□□ 0.16
TTC39A-208ENST00000413473 SNX1Q13596 522 aa16.03■□□□□ 0.16
TTC39A-208ENST00000413473 CCDC38Q502W7 563 aa16.03■□□□□ 0.16
TTC39A-208ENST00000413473 CROCCP2Q86T23 111 aa16.03■□□□□ 0.16
TTC39A-208ENST00000413473 CCT6BQ92526 530 aa16.03■□□□□ 0.16
TTC39A-208ENST00000413473 PRMT1Q99873 361 aaKnown RBP16.03■□□□□ 0.16
TTC39A-208ENST00000413473 TCEAL9Q9UHQ7 104 aa16.03■□□□□ 0.16
TTC39A-208ENST00000413473 SCAF8Q9UPN6 1271 aaKnown RBP16.03■□□□□ 0.16
TTC39A-208ENST00000413473 KRT5P13647 590 aa16.03■□□□□ 0.16
TTC39A-208ENST00000413473 SOX10P56693 466 aa16.03■□□□□ 0.16
TTC39A-208ENST00000413473 MCCD1P59942 119 aaPredicted RBP16.03■□□□□ 0.16
TTC39A-208ENST00000413473 DGKZQ13574 1117 aa16.03■□□□□ 0.16
TTC39A-208ENST00000413473 SGO2Q562F6 1265 aa16.03■□□□□ 0.16
TTC39A-208ENST00000413473 SV2AQ7L0J3 742 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms