RNA–Protein interactions for RNA: ENST00000413440.5

PRDM2-206, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-206ENST00000413440 TOPORSQ9NS56 1045 aaPredicted RBP6.22□□□□□ -1.41
PRDM2-206ENST00000413440 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.22□□□□□ -1.41
PRDM2-206ENST00000413440 GOLGA8IPA6NC78 632 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 GOLGA8JA6NMD2 632 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 HNRNPCL2B2RXH8 293 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 E7EVH7 732 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 MAFGO15525 162 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 HNRNPCL1O60812 293 aaKnown RBP6.21□□□□□ -1.41
PRDM2-206ENST00000413440 MMP1P03956 469 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 AKT1P31749 480 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 ST8SIA6P61647 398 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 XKR3Q5GH77 459 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 CDR2LQ86X02 465 aaPredicted RBP6.21□□□□□ -1.41
PRDM2-206ENST00000413440 REPS2Q8NFH8 660 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 GDAP1Q8TB36 358 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 CACTINQ8WUQ7 758 aaKnown RBP6.21□□□□□ -1.41
PRDM2-206ENST00000413440 KIF12Q96FN5 646 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 UBN1Q9NPG3 1134 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 COLQQ9Y215 455 aaPredicted RBP6.21□□□□□ -1.41
PRDM2-206ENST00000413440 PCDHB6Q9Y5E3 794 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 CACNA1FO60840 1977 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 TREHO43280 583 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 ALDH2P05091 517 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 XRCC5P13010 732 aaKnown RBP6.21□□□□□ -1.41
PRDM2-206ENST00000413440 EVCP57679 992 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 NOTUMQ6P988 496 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 POTEGQ6S5H5 508 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 POTEEQ6S8J3 1075 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 FBXO18Q8NFZ0 1043 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 HELQQ8TDG4 1101 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 TEKT4Q8WW24 435 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 MYLIPQ8WY64 445 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 NRCAMQ92823 1304 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 ZNF558Q96NG5 402 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 FAM204AQ9H8W3 233 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 ALG6Q9Y672 507 aa6.21□□□□□ -1.41
PRDM2-206ENST00000413440 CASTOR2A6NHX0 329 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 NOL3O60936 208 aaKnown RBP6.21□□□□□ -1.42
PRDM2-206ENST00000413440 DDIT3P35638 169 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 SRSF11Q05519 484 aaKnown RBP6.21□□□□□ -1.42
PRDM2-206ENST00000413440 PALB2Q86YC2 1186 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 WHAMMQ8TF30 809 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 APBB2Q92870 758 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 ACAP3Q96P50 834 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 XPO4Q9C0E2 1151 aaKnown RBP6.21□□□□□ -1.42
PRDM2-206ENST00000413440 FAM207AQ9NSI2 230 aaPredicted RBP6.21□□□□□ -1.42
PRDM2-206ENST00000413440 PAXBP1Q9Y5B6 917 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 ADGRA2Q96PE1 1338 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 TACC1O75410 805 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 TGFB3P10600 412 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 USP11P51784 963 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 KPNA1P52294 538 aaPredicted RBP6.21□□□□□ -1.42
PRDM2-206ENST00000413440 ZNF445P59923 1031 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 VEPH1Q14D04 833 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 CCDC122Q5T0U0 273 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 TMTC4Q5T4D3 741 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 CNKSR3Q6P9H4 555 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 SCARA5Q6ZMJ2 495 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 KRBA2Q6ZNG9 492 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 TMCO2Q7Z6W1 182 aaPredicted RBP6.21□□□□□ -1.42
PRDM2-206ENST00000413440 EHBP1Q8NDI1 1231 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 KIAA1468Q9P260 1216 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 GRXCR1A8MXD5 290 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 CES2O00748 559 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 CAPN9O14815 690 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 SUN1O94901 812 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 CYBAP13498 195 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 MORC3Q14149 939 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 ASIC2Q16515 512 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 IFI16Q16666 785 aaKnown RBP6.21□□□□□ -1.42
PRDM2-206ENST00000413440 ARHGAP44Q17R89 818 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 TBC1D25Q3MII6 688 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 MAP9Q49MG5 647 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 MICALCLQ6ZW33 695 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 BEST2Q8NFU1 509 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 CCDC127Q96BQ5 260 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 PSMB7Q99436 277 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 MRPL4Q9BYD3 311 aaKnown RBP6.21□□□□□ -1.42
PRDM2-206ENST00000413440 BHMT2Q9H2M3 363 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 PLEKHA4Q9H4M7 779 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.21□□□□□ -1.42
PRDM2-206ENST00000413440 COL4A3BPQ9Y5P4 624 aa6.21□□□□□ -1.42
PRDM2-206ENST00000413440 CTAGE15A4D2H0 777 aa6.2□□□□□ -1.42
PRDM2-206ENST00000413440 NCAM2O15394 837 aa6.2□□□□□ -1.42
PRDM2-206ENST00000413440 CXCL14O95715 111 aa6.2□□□□□ -1.42
PRDM2-206ENST00000413440 CTAGE8P0CG41 777 aa6.2□□□□□ -1.42
PRDM2-206ENST00000413440 PPARGP37231 505 aaPredicted RBP6.2□□□□□ -1.42
PRDM2-206ENST00000413440 CASP6P55212 293 aa6.2□□□□□ -1.42
PRDM2-206ENST00000413440 ITKQ08881 620 aa6.2□□□□□ -1.42
PRDM2-206ENST00000413440 MXD4Q14582 209 aaPredicted RBP6.2□□□□□ -1.42
PRDM2-206ENST00000413440 SGO2Q562F6 1265 aa6.2□□□□□ -1.42
PRDM2-206ENST00000413440 ZNF618Q5T7W0 954 aa6.2□□□□□ -1.42
PRDM2-206ENST00000413440 TAF2Q6P1X5 1199 aa6.2□□□□□ -1.42
PRDM2-206ENST00000413440 MTHFD1LQ6UB35 978 aa6.2□□□□□ -1.42
PRDM2-206ENST00000413440 GBP6Q6ZN66 633 aa6.2□□□□□ -1.42
PRDM2-206ENST00000413440 GSTA5Q7RTV2 222 aa6.2□□□□□ -1.42
PRDM2-206ENST00000413440 CTAGE6Q86UF2 777 aa6.2□□□□□ -1.42
PRDM2-206ENST00000413440 CTAGE4Q8IX94 777 aa6.2□□□□□ -1.42
PRDM2-206ENST00000413440 EFCAB13Q8IY85 973 aa6.2□□□□□ -1.42
PRDM2-206ENST00000413440 MLKLQ8NB16 471 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms