RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 NAB2Q15742 525 aa21.23■□□□□ 0.99
CPSF7-204ENST00000413232 LILRA6Q6PI73 481 aa21.23■□□□□ 0.99
CPSF7-204ENST00000413232 PRSS55Q6UWB4 352 aaPredicted RBP21.23■□□□□ 0.99
CPSF7-204ENST00000413232 OTOP3Q7RTS5 596 aa21.23■□□□□ 0.99
CPSF7-204ENST00000413232 ZBTB8OSQ8IWT0 167 aa21.23■□□□□ 0.99
CPSF7-204ENST00000413232 HASPINQ8TF76 798 aa21.23■□□□□ 0.99
CPSF7-204ENST00000413232 RIN2Q8WYP3 895 aaPredicted RBP21.23■□□□□ 0.99
CPSF7-204ENST00000413232 VPS13AQ96RL7 3174 aa21.23■□□□□ 0.99
CPSF7-204ENST00000413232 ZMYM2Q9UBW7 1377 aa21.23■□□□□ 0.99
CPSF7-204ENST00000413232 ACKR2O00590 384 aa21.22■□□□□ 0.99
CPSF7-204ENST00000413232 EIF5BO60841 1220 aaKnown RBP21.22■□□□□ 0.99
CPSF7-204ENST00000413232 RECQL4O94761 1208 aa21.22■□□□□ 0.99
CPSF7-204ENST00000413232 CCT6AP40227 531 aaKnown RBP21.22■□□□□ 0.99
CPSF7-204ENST00000413232 NAMPTP43490 491 aa21.22■□□□□ 0.99
CPSF7-204ENST00000413232 FXR2P51116 673 aaKnown RBP eCLIP21.22■□□□□ 0.99
CPSF7-204ENST00000413232 PRPF4BQ13523 1007 aaKnown RBP21.22■□□□□ 0.99
CPSF7-204ENST00000413232 MAPK6Q16659 721 aa21.22■□□□□ 0.99
CPSF7-204ENST00000413232 USP41Q3LFD5 358 aa21.22■□□□□ 0.99
CPSF7-204ENST00000413232 C8orf34Q49A92 452 aa21.22■□□□□ 0.99
CPSF7-204ENST00000413232 RTP2Q5QGT7 225 aa21.22■□□□□ 0.99
CPSF7-204ENST00000413232 ERMNQ8TAM6 284 aa21.22■□□□□ 0.99
CPSF7-204ENST00000413232 ACSF2Q96CM8 615 aaPredicted RBP21.22■□□□□ 0.99
CPSF7-204ENST00000413232 PRRX2Q99811 253 aa21.22■□□□□ 0.99
CPSF7-204ENST00000413232 BHMT2Q9H2M3 363 aa21.22■□□□□ 0.99
CPSF7-204ENST00000413232 KCNK12Q9HB15 430 aa21.22■□□□□ 0.99
CPSF7-204ENST00000413232 WDR6Q9NNW5 1121 aaKnown RBP21.22■□□□□ 0.99
CPSF7-204ENST00000413232 PCDHB6Q9Y5E3 794 aa21.22■□□□□ 0.99
CPSF7-204ENST00000413232 MYH11P35749 1972 aa21.22■□□□□ 0.99
CPSF7-204ENST00000413232 NOTCH4Q99466 2003 aa21.21■□□□□ 0.99
CPSF7-204ENST00000413232 N4BP3O15049 544 aa21.21■□□□□ 0.99
CPSF7-204ENST00000413232 TADA2AO75478 443 aa21.21■□□□□ 0.99
CPSF7-204ENST00000413232 KIF4AO95239 1232 aa21.21■□□□□ 0.99
CPSF7-204ENST00000413232 PAPLNO95428 1278 aa21.21■□□□□ 0.99
CPSF7-204ENST00000413232 U2AF2P26368 475 aaKnown RBP eCLIP21.21■□□□□ 0.999e-9■■■□□ 15
CPSF7-204ENST00000413232 HMGN5P82970 282 aaKnown RBP21.21■□□□□ 0.99
CPSF7-204ENST00000413232 TUSC3Q13454 348 aa21.21■□□□□ 0.99
CPSF7-204ENST00000413232 HSP90AA2PQ14568 343 aaPredicted RBP21.21■□□□□ 0.99
CPSF7-204ENST00000413232 IL17AQ16552 155 aa21.21■□□□□ 0.99
CPSF7-204ENST00000413232 NT5DC1Q5TFE4 455 aa21.21■□□□□ 0.99
CPSF7-204ENST00000413232 RSAD2Q8WXG1 361 aa21.21■□□□□ 0.99
CPSF7-204ENST00000413232 ZSCAN31Q96LW9 406 aaPredicted RBP21.21■□□□□ 0.99
CPSF7-204ENST00000413232 MYADMQ96S97 322 aa21.21■□□□□ 0.99
CPSF7-204ENST00000413232 C2orf40Q9H1Z8 148 aa21.21■□□□□ 0.99
CPSF7-204ENST00000413232 FNIP2Q9P278 1114 aa21.21■□□□□ 0.99
CPSF7-204ENST00000413232 KIAA1024Q9UPX6 916 aa21.21■□□□□ 0.99
CPSF7-204ENST00000413232 CITO14578 2027 aa21.21■□□□□ 0.99
CPSF7-204ENST00000413232 ZFHX2Q9C0A1 2572 aaPredicted RBP21.2■□□□□ 0.98
CPSF7-204ENST00000413232 PP2D1A8MPX8 630 aa21.2■□□□□ 0.98
CPSF7-204ENST00000413232 H0Y858 1186 aa21.2■□□□□ 0.98
CPSF7-204ENST00000413232 TRAPPC10P48553 1259 aa21.2■□□□□ 0.98
CPSF7-204ENST00000413232 PTGDRQ13258 359 aa21.2■□□□□ 0.98
CPSF7-204ENST00000413232 FAM184AQ8NB25 1140 aa21.2■□□□□ 0.98
CPSF7-204ENST00000413232 DEPTORQ8TB45 409 aa21.2■□□□□ 0.98
CPSF7-204ENST00000413232 SMG7Q92540 1137 aaKnown RBP21.2■□□□□ 0.98
CPSF7-204ENST00000413232 NT5C3AQ9H0P0 336 aa21.2■□□□□ 0.98
CPSF7-204ENST00000413232 SH2B1Q9NRF2 756 aaPredicted RBP21.2■□□□□ 0.98
CPSF7-204ENST00000413232 DDX19AQ9NUU7 478 aaKnown RBP21.2■□□□□ 0.98
CPSF7-204ENST00000413232 LRWD1Q9UFC0 647 aa21.2■□□□□ 0.98
CPSF7-204ENST00000413232 GDAQ9Y2T3 454 aa21.2■□□□□ 0.98
CPSF7-204ENST00000413232 CFAP54Q96N23 3096 aa21.19■□□□□ 0.98
CPSF7-204ENST00000413232 NARSO43776 548 aaKnown RBP21.19■□□□□ 0.98
CPSF7-204ENST00000413232 THP07101 528 aa21.19■□□□□ 0.98
CPSF7-204ENST00000413232 MUTP22033 750 aa21.19■□□□□ 0.98
CPSF7-204ENST00000413232 CDC25AP30304 524 aa21.19■□□□□ 0.98
CPSF7-204ENST00000413232 TDGQ13569 410 aa21.19■□□□□ 0.98
CPSF7-204ENST00000413232 GPR65Q8IYL9 337 aa21.19■□□□□ 0.98
CPSF7-204ENST00000413232 IGSF22Q8N9C0 903 aa21.19■□□□□ 0.98
CPSF7-204ENST00000413232 CLSTN3Q9BQT9 956 aa21.19■□□□□ 0.98
CPSF7-204ENST00000413232 RHOBTB2Q9BYZ6 727 aa21.19■□□□□ 0.98
CPSF7-204ENST00000413232 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.19■□□□□ 0.98
CPSF7-204ENST00000413232 CLUHO75153 1309 aa21.19■□□□□ 0.98
CPSF7-204ENST00000413232 DMDP11532 3685 aa21.18■□□□□ 0.98
CPSF7-204ENST00000413232 E9PMD0 336 aa21.18■□□□□ 0.98
CPSF7-204ENST00000413232 ADAM12O43184 909 aa21.18■□□□□ 0.98
CPSF7-204ENST00000413232 NPR3P17342 541 aa21.18■□□□□ 0.98
CPSF7-204ENST00000413232 GNL2Q13823 731 aaKnown RBP21.18■□□□□ 0.98
CPSF7-204ENST00000413232 PDIA5Q14554 519 aa21.18■□□□□ 0.98
CPSF7-204ENST00000413232 TMEM132AQ24JP5 1023 aa21.18■□□□□ 0.98
CPSF7-204ENST00000413232 FAM171A1Q5VUB5 890 aa21.18■□□□□ 0.98
CPSF7-204ENST00000413232 HAUS3Q68CZ6 603 aa21.18■□□□□ 0.98
CPSF7-204ENST00000413232 CWF19L1Q69YN2 538 aaKnown RBP21.18■□□□□ 0.98
CPSF7-204ENST00000413232 DAW1Q8N136 415 aa21.18■□□□□ 0.98
CPSF7-204ENST00000413232 LNX1Q8TBB1 728 aaPredicted RBP21.18■□□□□ 0.98
CPSF7-204ENST00000413232 HDAC7Q8WUI4 952 aa21.18■□□□□ 0.98
CPSF7-204ENST00000413232 PLEKHA4Q9H4M7 779 aa21.18■□□□□ 0.98
CPSF7-204ENST00000413232 DUSP12Q9UNI6 340 aa21.18■□□□□ 0.98
CPSF7-204ENST00000413232 GALR2O43603 387 aaPredicted RBP21.17■□□□□ 0.98
CPSF7-204ENST00000413232 PI15O43692 258 aa21.17■□□□□ 0.98
CPSF7-204ENST00000413232 GBP2P32456 591 aaPredicted RBP21.17■□□□□ 0.98
CPSF7-204ENST00000413232 PPP2R5AQ15172 486 aa21.17■□□□□ 0.98
CPSF7-204ENST00000413232 GLRA4Q5JXX5 417 aa21.17■□□□□ 0.98
CPSF7-204ENST00000413232 ASTLQ6HA08 431 aaPredicted RBP21.17■□□□□ 0.98
CPSF7-204ENST00000413232 CD300LGQ6UXG3 332 aa21.17■□□□□ 0.98
CPSF7-204ENST00000413232 CYP26C1Q6V0L0 522 aa21.17■□□□□ 0.98
CPSF7-204ENST00000413232 KCNK18Q7Z418 384 aa21.17■□□□□ 0.98
CPSF7-204ENST00000413232 CEP57Q86XR8 500 aa21.17■□□□□ 0.98
CPSF7-204ENST00000413232 CEP120Q8N960 986 aa21.17■□□□□ 0.98
CPSF7-204ENST00000413232 ST13P5Q8NFI4 369 aaPredicted RBP21.17■□□□□ 0.98
CPSF7-204ENST00000413232 SNX29Q8TEQ0 813 aa21.17■□□□□ 0.98
CPSF7-204ENST00000413232 ADPGKQ9BRR6 497 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms