RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 DNAJC8O75937 253 aaPredicted RBP20.37■□□□□ 0.85
TNFRSF8-202ENST00000413146 HSD17B4P51659 736 aa20.37■□□□□ 0.85
TNFRSF8-202ENST00000413146 XRCC4Q13426 336 aa20.37■□□□□ 0.85
TNFRSF8-202ENST00000413146 NCAPGQ9BPX3 1015 aa20.37■□□□□ 0.85
TNFRSF8-202ENST00000413146 ST6GALNAC4Q9H4F1 302 aa20.37■□□□□ 0.85
TNFRSF8-202ENST00000413146 CCDC134Q9H6E4 229 aa20.37■□□□□ 0.85
TNFRSF8-202ENST00000413146 CCPG1Q9ULG6 757 aa20.37■□□□□ 0.85
TNFRSF8-202ENST00000413146 VIMP08670 466 aaKnown RBP20.37■□□□□ 0.85
TNFRSF8-202ENST00000413146 DLATP10515 647 aaKnown RBP20.37■□□□□ 0.85
TNFRSF8-202ENST00000413146 CYP11B1P15538 503 aa20.37■□□□□ 0.85
TNFRSF8-202ENST00000413146 PEX3P56589 373 aa20.37■□□□□ 0.85
TNFRSF8-202ENST00000413146 CDR2Q01850 454 aa20.37■□□□□ 0.85
TNFRSF8-202ENST00000413146 AUHQ13825 339 aaKnown RBP20.37■□□□□ 0.85
TNFRSF8-202ENST00000413146 SNRNP35Q16560 246 aaKnown RBP20.37■□□□□ 0.85
TNFRSF8-202ENST00000413146 TBC1D10BQ4KMP7 808 aaPredicted RBP20.37■□□□□ 0.85
TNFRSF8-202ENST00000413146 NSMFQ6X4W1 530 aa20.37■□□□□ 0.85
TNFRSF8-202ENST00000413146 TRMT10CQ7L0Y3 403 aaKnown RBP20.37■□□□□ 0.85
TNFRSF8-202ENST00000413146 MIGA2Q7L4E1 593 aa20.37■□□□□ 0.85
TNFRSF8-202ENST00000413146 ZKSCAN4Q969J2 545 aaPredicted RBP20.37■□□□□ 0.85
TNFRSF8-202ENST00000413146 SH2D3AQ9BRG2 576 aa20.37■□□□□ 0.85
TNFRSF8-202ENST00000413146 CLRN2A0PK11 232 aa20.36■□□□□ 0.85
TNFRSF8-202ENST00000413146 DHX15O43143 795 aaKnown RBP20.36■□□□□ 0.85
TNFRSF8-202ENST00000413146 YWHABP31946 246 aaKnown RBP20.36■□□□□ 0.85
TNFRSF8-202ENST00000413146 KRT39Q6A163 491 aa20.36■□□□□ 0.85
TNFRSF8-202ENST00000413146 MFSD5Q6N075 450 aa20.36■□□□□ 0.85
TNFRSF8-202ENST00000413146 PIGWQ7Z7B1 504 aa20.36■□□□□ 0.85
TNFRSF8-202ENST00000413146 CBWD2Q8IUF1 395 aa20.36■□□□□ 0.85
TNFRSF8-202ENST00000413146 SEMA4DQ92854 862 aa20.36■□□□□ 0.85
TNFRSF8-202ENST00000413146 CCDC127Q96BQ5 260 aa20.36■□□□□ 0.85
TNFRSF8-202ENST00000413146 ROPN1BQ9BZX4 212 aaPredicted RBP20.36■□□□□ 0.85
TNFRSF8-202ENST00000413146 LRRC19Q9H756 370 aa20.36■□□□□ 0.85
TNFRSF8-202ENST00000413146 ROPN1Q9HAT0 212 aaPredicted RBP20.36■□□□□ 0.85
TNFRSF8-202ENST00000413146 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.36■□□□□ 0.85
TNFRSF8-202ENST00000413146 IFNAR2P48551 515 aa20.36■□□□□ 0.85
TNFRSF8-202ENST00000413146 SGO2Q562F6 1265 aa20.36■□□□□ 0.85
TNFRSF8-202ENST00000413146 TNFAIP8L3Q5GJ75 292 aa20.36■□□□□ 0.85
TNFRSF8-202ENST00000413146 NIPA1Q7RTP0 329 aa20.36■□□□□ 0.85
TNFRSF8-202ENST00000413146 IL31RAQ8NI17 732 aa20.36■□□□□ 0.85
TNFRSF8-202ENST00000413146 KIFAP3Q92845 792 aa20.36■□□□□ 0.85
TNFRSF8-202ENST00000413146 TIPINQ9BVW5 301 aa20.36■□□□□ 0.85
TNFRSF8-202ENST00000413146 RGS17Q9UGC6 210 aaPredicted RBP20.36■□□□□ 0.85
TNFRSF8-202ENST00000413146 EXOC7Q9UPT5 735 aa20.36■□□□□ 0.85
TNFRSF8-202ENST00000413146 CLDN3O15551 220 aa20.35■□□□□ 0.85
TNFRSF8-202ENST00000413146 NCKAP1LP55160 1127 aa20.35■□□□□ 0.85
TNFRSF8-202ENST00000413146 KRT17Q04695 432 aa20.35■□□□□ 0.85
TNFRSF8-202ENST00000413146 CCDC38Q502W7 563 aa20.35■□□□□ 0.85
TNFRSF8-202ENST00000413146 MSL1Q68DK7 614 aa20.35■□□□□ 0.85
TNFRSF8-202ENST00000413146 CHADLQ6NUI6 762 aa20.35■□□□□ 0.85
TNFRSF8-202ENST00000413146 AGBL1Q96MI9 1066 aa20.35■□□□□ 0.85
TNFRSF8-202ENST00000413146 NT5C1BQ96P26 610 aa20.35■□□□□ 0.85
TNFRSF8-202ENST00000413146 ELAC2Q9BQ52 826 aaKnown RBP20.35■□□□□ 0.85
TNFRSF8-202ENST00000413146 DEFB129Q9H1M3 183 aa20.35■□□□□ 0.85
TNFRSF8-202ENST00000413146 AGO4Q9HCK5 861 aaKnown RBP20.35■□□□□ 0.85
TNFRSF8-202ENST00000413146 GPRC5CQ9NQ84 441 aa20.35■□□□□ 0.85
TNFRSF8-202ENST00000413146 COL20A1Q9P218 1284 aa20.35■□□□□ 0.85
TNFRSF8-202ENST00000413146 H0YIN7 160 aa20.35■□□□□ 0.85
TNFRSF8-202ENST00000413146 IRX3P78415 501 aaPredicted RBP20.35■□□□□ 0.85
TNFRSF8-202ENST00000413146 TKFCQ3LXA3 575 aa20.35■□□□□ 0.85
TNFRSF8-202ENST00000413146 SLC17A8Q8NDX2 589 aa20.35■□□□□ 0.85
TNFRSF8-202ENST00000413146 SAAL1Q96ER3 474 aa20.35■□□□□ 0.85
TNFRSF8-202ENST00000413146 CDC42EP4Q9H3Q1 356 aaKnown RBP20.35■□□□□ 0.85
TNFRSF8-202ENST00000413146 HOMER3Q9NSC5 361 aa20.35■□□□□ 0.85
TNFRSF8-202ENST00000413146 WHRNQ9P202 907 aa20.35■□□□□ 0.85
TNFRSF8-202ENST00000413146 LYPLA2O95372 231 aa20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 MAP2K2P36507 400 aa20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 SF3A3Q12874 501 aaKnown RBP eCLIP20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 CNGA2Q16280 664 aa20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 STYK1Q6J9G0 422 aa20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 TRMT1LQ7Z2T5 733 aaKnown RBP20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 HELQQ8TDG4 1101 aa20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 FAM151AQ8WW52 585 aa20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 C1orf54Q8WWF1 131 aa20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 PSPC1Q8WXF1 523 aaKnown RBP20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 SLCO2A1Q92959 643 aa20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 TMEM8AQ9HCN3 771 aa20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 ASIC3Q9UHC3 531 aa20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 TMEM150BA6NC51 233 aa20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 FSCN2O14926 492 aa20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 PPIP5K2O43314 1243 aa20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 ICAM1P05362 532 aa20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 GSTA1P08263 222 aa20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 GPC3P51654 580 aa20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 MTMR1Q13613 665 aa20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 LLGL1Q15334 1064 aa20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 LONRF1Q17RB8 773 aa20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 FAM102BQ5T8I3 360 aa20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 ACAD10Q6JQN1 1059 aa20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 DYDC1Q8WWB3 177 aa20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 MYCBPQ99417 103 aaPredicted RBP20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 POP1Q99575 1024 aaKnown RBP20.34■□□□□ 0.85
TNFRSF8-202ENST00000413146 TNS1Q9HBL0 1735 aaKnown RBP20.33■□□□□ 0.85
TNFRSF8-202ENST00000413146 SPDYE2BA6NHP3 402 aa20.33■□□□□ 0.85
TNFRSF8-202ENST00000413146 NFIBO00712 420 aa20.33■□□□□ 0.85
TNFRSF8-202ENST00000413146 ACSL3O95573 720 aa20.33■□□□□ 0.85
TNFRSF8-202ENST00000413146 SPDYE6P0CI01 402 aa20.33■□□□□ 0.85
TNFRSF8-202ENST00000413146 SNX1Q13596 522 aa20.33■□□□□ 0.85
TNFRSF8-202ENST00000413146 EXOC3L1Q86VI1 746 aa20.33■□□□□ 0.85
TNFRSF8-202ENST00000413146 FBXL13Q8NEE6 735 aa20.33■□□□□ 0.85
TNFRSF8-202ENST00000413146 PARD3BQ8TEW8 1205 aa20.33■□□□□ 0.85
TNFRSF8-202ENST00000413146 DDX23Q9BUQ8 820 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms