RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 NOTOA8MTQ0 251 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 SNAI1O95863 264 aaPredicted RBP6.11□□□□□ -1.43
LINC00342-201ENST00000412393 RARBP10826 455 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 ALAS1P13196 640 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 NCLP19338 710 aaKnown RBP6.11□□□□□ -1.43
LINC00342-201ENST00000412393 YARSP54577 528 aaKnown RBP6.11□□□□□ -1.43
LINC00342-201ENST00000412393 SNAP25P60880 206 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 PUM1Q14671 1186 aaKnown RBP eCLIP6.11□□□□□ -1.43
LINC00342-201ENST00000412393 LRRC41Q15345 812 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 SLC14A2Q15849 920 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 TKFCQ3LXA3 575 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 TTC22Q5TAA0 569 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 CCDC174Q6PII3 467 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 MAMDC4Q6UXC1 1216 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 GAS2L3Q86XJ1 694 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 MSL3Q8N5Y2 521 aaKnown RBP6.11□□□□□ -1.43
LINC00342-201ENST00000412393 ESR2Q92731 530 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 TTC14Q96N46 770 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 KIF2CQ99661 725 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 GDF15Q99988 308 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 TMEM47Q9BQJ4 181 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 DSCC1Q9BVC3 393 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 C12orf49Q9H741 205 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 ACAD9Q9H845 621 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 HOMER2Q9NSB8 354 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 EBF1Q9UH73 591 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 CNPY2Q9Y2B0 182 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 BAZ2BQ9UIF8 2168 aaKnown RBP6.11□□□□□ -1.43
LINC00342-201ENST00000412393 LTBP2Q14767 1821 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 NEDD4P46934 1319 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 FRMPD2Q68DX3 1309 aaPredicted RBP6.1□□□□□ -1.43
LINC00342-201ENST00000412393 MYH7BA7E2Y1 1941 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 A0A1W2PPC1 479 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 B4E1Z4 1266 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 GOLGA6L22H0YM25 854 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 SUV39H1O43463 412 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 PGK1P00558 417 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 PDHBP11177 359 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 AKR1A1P14550 325 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 GSPT1P15170 499 aaKnown RBP6.1□□□□□ -1.43
LINC00342-201ENST00000412393 SLC16A2P36021 539 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 ADCYAP1R1P41586 468 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 MAGEA10P43363 369 aaPredicted RBP6.1□□□□□ -1.43
LINC00342-201ENST00000412393 NT5C2P49902 561 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 RTP1P59025 263 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 ERVFRD-1P60508 538 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 NUCB2P80303 420 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 CNTN2Q02246 1040 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 ACVR2BQ13705 512 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 IMMTQ16891 758 aaKnown RBP6.1□□□□□ -1.43
LINC00342-201ENST00000412393 CCDC178Q5BJE1 867 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 MUM1L1Q5H9M0 696 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 SYDE2Q5VT97 1194 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 BTNL9Q6UXG8 535 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 SLC39A5Q6ZMH5 540 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 RNF180Q86T96 592 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 IQCA1Q86XH1 822 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 ANP32BQ92688 251 aaKnown RBP6.1□□□□□ -1.43
LINC00342-201ENST00000412393 FERMT2Q96AC1 680 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 FGD4Q96M96 766 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 FRMD6Q96NE9 622 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 ABHD16BQ9H3Z7 469 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 A1CFQ9NQ94 594 aaKnown RBP6.1□□□□□ -1.43
LINC00342-201ENST00000412393 XPNPEP3Q9NQH7 507 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 CTNNA3Q9UI47 895 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 ZHX1Q9UKY1 873 aaPredicted RBP6.1□□□□□ -1.43
LINC00342-201ENST00000412393 FAM184BQ9ULE4 1060 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 CCPG1Q9ULG6 757 aa6.1□□□□□ -1.43
LINC00342-201ENST00000412393 KIAA1217Q5T5P2 1943 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 RAD50Q92878 1312 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 K7ESM1 405 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 DUSP11O75319 330 aaKnown RBP6.09□□□□□ -1.43
LINC00342-201ENST00000412393 ICAM1P05362 532 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 SNHG28P0DPA3 235 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 BMP8BP34820 402 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 GTF2F1P35269 517 aaKnown RBP eCLIP6.09□□□□□ -1.43
LINC00342-201ENST00000412393 ZNF543Q08ER8 600 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 CLEC16AQ2KHT3 1053 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 TSNAXIP1Q2TAA8 658 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 NSMFQ6X4W1 530 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 ARMCX2Q7L311 632 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 DGKHQ86XP1 1220 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 CCDC144CPQ8IYA2 1237 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 TMEFF1Q8IYR6 380 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 FAM133AQ8N9E0 248 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 SYT8Q8NBV8 401 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 RUFY2Q8WXA3 655 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 ACSF2Q96CM8 615 aaPredicted RBP6.09□□□□□ -1.43
LINC00342-201ENST00000412393 IL17RAQ96F46 866 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 MAP6Q96JE9 813 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 LBHD1Q9BQE6 289 aaPredicted RBP6.09□□□□□ -1.43
LINC00342-201ENST00000412393 KRT23Q9C075 422 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 IL25Q9H293 177 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 RANBP17Q9H2T7 1088 aaKnown RBP6.09□□□□□ -1.43
LINC00342-201ENST00000412393 ADAM7Q9H2U9 754 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 KAT14Q9H8E8 782 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 CNNM2Q9H8M5 875 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 ATP11BQ9Y2G3 1177 aa6.09□□□□□ -1.43
LINC00342-201ENST00000412393 SYNRGQ9UMZ2 1314 aa6.08□□□□□ -1.44
LINC00342-201ENST00000412393 ASB14A6NK59 587 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms