RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 PIP5K1AQ99755 562 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 ZFYVE28Q9HCC9 887 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 ASNSD1Q9NWL6 643 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 NMRK1Q9NWW6 199 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 EVLQ9UI08 416 aaPredicted RBP5.56□□□□□ -1.52
HERC4-205ENST00000412272 PPP2R3BQ9Y5P8 575 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 ZNF335Q9H4Z2 1342 aaPredicted RBP5.56□□□□□ -1.52
HERC4-205ENST00000412272 ZNF233A6NK53 670 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 hCG_1984214I3L0E3 225 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 SLC4A1P02730 911 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 LYNP07948 512 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 CPA1P15085 419 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 RAB15P59190 212 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 KCNC4Q03721 635 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 CD300CQ08708 224 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 GOLGA8FQ08AF8 430 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 GOLGA8DPQ0D2H9 430 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 UBE4AQ14139 1066 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 KRT32Q14532 448 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 MAPRE2Q15555 327 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 CLVS2Q5SYC1 327 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 FCRLBQ6BAA4 426 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 MARK2Q7KZI7 788 aaKnown RBP5.56□□□□□ -1.52
HERC4-205ENST00000412272 PPP1R42Q7Z4L9 355 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 PIGWQ7Z7B1 504 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 FERMT3Q86UX7 667 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 SYTL1Q8IYJ3 562 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 PHOSPHO2Q8TCD6 241 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 NELFBQ8WX92 580 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 RILPL2Q969X0 211 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 IQCDQ96DY2 449 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 OLFM3Q96PB7 478 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 USP28Q96RU2 1077 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 HAUS4Q9H6D7 363 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 PHAXQ9H814 394 aaKnown RBP5.56□□□□□ -1.52
HERC4-205ENST00000412272 TMBIM4Q9HC24 238 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 METTL5Q9NRN9 209 aaKnown RBP5.56□□□□□ -1.52
HERC4-205ENST00000412272 CD2APQ9Y5K6 639 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 NALCNQ8IZF0 1738 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 LINC01387J3KSC0 135 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 ADCY3O60266 1144 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 CNOT3O75175 753 aaKnown RBP5.56□□□□□ -1.52
HERC4-205ENST00000412272 ZMYND10O75800 440 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 ALDH1L1O75891 902 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 EPN2O95208 641 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 PLCB3Q01970 1234 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 SKIV2LQ15477 1246 aaKnown RBP5.56□□□□□ -1.52
HERC4-205ENST00000412272 GSTA3Q16772 222 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 GTF3C2Q8WUA4 911 aaPredicted RBP5.56□□□□□ -1.52
HERC4-205ENST00000412272 NRBF2Q96F24 287 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 ZIM3Q96PE6 472 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 VPS35Q96QK1 796 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 XPO6Q96QU8 1125 aaKnown RBP5.56□□□□□ -1.52
HERC4-205ENST00000412272 MMS19Q96T76 1030 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 GMLQ99445 158 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 ARMC1Q9NVT9 282 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 CYP39A1Q9NYL5 469 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 LAMP5Q9UJQ1 280 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 COQ6Q9Y2Z9 468 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 SAR1BQ9Y6B6 198 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 TMEM131LA2VDJ0 1609 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 CRB1P82279 1406 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 SOWAHDA6NJG2 315 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 PFDN6O15212 129 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 NDUFA2O43678 99 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 PPP6R2O75170 966 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 CALM1P0DP23 149 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 CALM2P0DP24 149 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 CALM3P0DP25 149 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 GM2AP17900 193 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 LMOD1P29536 600 aaPredicted RBP5.55□□□□□ -1.52
HERC4-205ENST00000412272 RGS2P41220 211 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 P2RX3P56373 397 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 PPP2R5CQ13362 524 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 CLUL1Q15846 466 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 KCTD21Q4G0X4 260 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 NECAB1Q8N987 351 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 CAGE1Q8TC20 777 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 FBXO41Q8TF61 875 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 FERMT2Q96AC1 680 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 NMD3Q96D46 503 aaKnown RBP5.55□□□□□ -1.52
HERC4-205ENST00000412272 COX4I2Q96KJ9 171 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 KCTD10Q9H3F6 313 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 TAF1DQ9H5J8 278 aaPredicted RBP5.55□□□□□ -1.52
HERC4-205ENST00000412272 SDHAF3Q9NRP4 125 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 DACH1Q9UI36 760 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 A0A0U1RQJ8 604 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 ARHGAP10A1A4S6 786 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 PIK3CDO00329 1044 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 VILLO15195 856 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 RHOBTB3O94955 611 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 HLA-DRAP01903 254 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 PIM1P11309 404 aaPredicted RBP5.55□□□□□ -1.52
HERC4-205ENST00000412272 SELLP14151 372 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 KRT20P35900 424 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 PPP1R2P41236 205 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 SLC1A1P43005 524 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 GSTO1P78417 241 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 LACTBP83111 547 aaPredicted RBP5.55□□□□□ -1.52
HERC4-205ENST00000412272 OCRLQ01968 901 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms