RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 ADAMTS10Q9H324 1103 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 SRRDQ9UH36 339 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 A0A087WZ62 844 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 MYADML2A6NDP7 307 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 OGTO15294 1046 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 CLDN3O15551 220 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 ZEB2O60315 1214 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 PLEKP08567 350 aaPredicted RBP5.98□□□□□ -1.45
EPHA4-202ENST00000409854 ANXA13P27216 316 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 CST5P28325 142 aaPredicted RBP5.98□□□□□ -1.45
EPHA4-202ENST00000409854 GCLMP48507 274 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 CDC42EP1Q00587 391 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 BEX3Q00994 111 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 CETN1Q12798 172 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 PRPF4BQ13523 1007 aaKnown RBP5.98□□□□□ -1.45
EPHA4-202ENST00000409854 ZBTB41Q5SVQ8 909 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 ATF7IP2Q5U623 682 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 SRGAP1Q7Z6B7 1085 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 ZNF516Q92618 1163 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 CGRRF1Q99675 332 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 FDXACB1Q9BRP7 624 aaPredicted RBP5.98□□□□□ -1.45
EPHA4-202ENST00000409854 STK33Q9BYT3 514 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 SETD4Q9NVD3 440 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 SAGE1Q9NXZ1 904 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 ANKFY1Q9P2R3 1169 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 CPSF3Q9UKF6 684 aaKnown RBP5.98□□□□□ -1.45
EPHA4-202ENST00000409854 F8VZ95 297 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 ZNF263O14978 683 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 ZC3H11AO75152 810 aaKnown RBP eCLIP5.98□□□□□ -1.45
EPHA4-202ENST00000409854 GPR32O75388 356 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 C4BPAP04003 597 aaKnown RBP5.98□□□□□ -1.45
EPHA4-202ENST00000409854 VTNP04004 478 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 MYL3P08590 195 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 TNNT1P13805 278 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 ARHGAP25P42331 645 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 TRIM32Q13049 653 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 PCBP1Q15365 356 aaKnown RBP eCLIP5.98□□□□□ -1.45
EPHA4-202ENST00000409854 ZACNQ401N2 412 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 SLC9C1Q4G0N8 1177 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 PHLDB3Q6NSJ2 640 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 GJB7Q6PEY0 223 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 FMNL3Q8IVF7 1028 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 KLHDC9Q8NEP7 349 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 OLIG1Q8TAK6 271 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 PXYLP1Q8TE99 480 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 TOPORSQ9NS56 1045 aaPredicted RBP5.98□□□□□ -1.45
EPHA4-202ENST00000409854 RBAKQ9NYW8 714 aaPredicted RBP5.98□□□□□ -1.45
EPHA4-202ENST00000409854 NENFQ9UMX5 172 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 AKT3Q9Y243 479 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 BZW2Q9Y6E2 419 aaKnown RBP5.98□□□□□ -1.45
EPHA4-202ENST00000409854 PTPRJQ12913 1337 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 INO80B-WBP1J3KQ70 363 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 B4GALT5O43286 388 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 EIF4A3P38919 411 aaKnown RBP5.97□□□□□ -1.45
EPHA4-202ENST00000409854 ACOT2P49753 483 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 KIF11P52732 1056 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 KRT83P78385 493 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 RAPGEF1Q13905 1077 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 ASIC2Q16515 512 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 SMYD5Q6GMV2 418 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 CCSAPQ6IQ19 270 aaPredicted RBP5.97□□□□□ -1.45
EPHA4-202ENST00000409854 SV2AQ7L0J3 742 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 SESTD1Q86VW0 696 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 ZNF710Q8N1W2 664 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 FBXL13Q8NEE6 735 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 CD99L2Q8TCZ2 262 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 SEMA4DQ92854 862 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 POP1Q99575 1024 aaKnown RBP5.97□□□□□ -1.45
EPHA4-202ENST00000409854 MTG1Q9BT17 334 aaPredicted RBP5.97□□□□□ -1.45
EPHA4-202ENST00000409854 SYT11Q9BT88 431 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 INO80BQ9C086 356 aaPredicted RBP5.97□□□□□ -1.45
EPHA4-202ENST00000409854 CDT1Q9H211 546 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 PDZD7Q9H5P4 517 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 DNAJC12Q9UKB3 198 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 A0A0U1RQJ8 604 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 GPR25O00155 361 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 TSPAN1O60635 241 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 TRPA1O75762 1119 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 HMGCRP04035 888 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 RARBP10826 455 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 MCF2P10911 925 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 FERP16591 822 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 YY1P25490 414 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 HOXD10P28358 340 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 SOX5P35711 763 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 TNFSF9P41273 254 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 AP3M2P53677 418 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 ETF1P62495 437 aaKnown RBP5.97□□□□□ -1.45
EPHA4-202ENST00000409854 MAP2K1Q02750 393 aaPredicted RBP5.97□□□□□ -1.45
EPHA4-202ENST00000409854 SURF1Q15526 300 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 EEF1DP3Q658K8 133 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 RUFY4Q6ZNE9 571 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 WDR49Q8IV35 697 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 ARHGEF19Q8IW93 802 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 ATRIPQ8WXE1 791 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 CCDC127Q96BQ5 260 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 CCDC42Q96M95 316 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 SPAG5Q96R06 1193 aa5.97□□□□□ -1.45
EPHA4-202ENST00000409854 GEMIN8Q9NWZ8 242 aaKnown RBP5.97□□□□□ -1.45
EPHA4-202ENST00000409854 MYH10P35580 1976 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms