RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 GTF2H1P32780 548 aa8.13□□□□□ -1.11
CXCR4-202ENST00000409817 SOX5P35711 763 aa8.13□□□□□ -1.11
CXCR4-202ENST00000409817 EPHA4P54764 986 aa8.13□□□□□ -1.11
CXCR4-202ENST00000409817 ZNF211Q13398 564 aaPredicted RBP8.13□□□□□ -1.11
CXCR4-202ENST00000409817 FAM160B1Q5W0V3 765 aa8.13□□□□□ -1.11
CXCR4-202ENST00000409817 PLA2G4FQ68DD2 849 aa8.13□□□□□ -1.11
CXCR4-202ENST00000409817 TMCO3Q6UWJ1 677 aa8.13□□□□□ -1.11
CXCR4-202ENST00000409817 KSR1Q8IVT5 923 aa8.13□□□□□ -1.11
CXCR4-202ENST00000409817 CCDC60Q8IWA6 550 aaPredicted RBP8.13□□□□□ -1.11
CXCR4-202ENST00000409817 SHCBP1Q8NEM2 672 aa8.13□□□□□ -1.11
CXCR4-202ENST00000409817 UBE2Q2Q8WVN8 375 aa8.13□□□□□ -1.11
CXCR4-202ENST00000409817 FAM81BQ96LP2 452 aa8.13□□□□□ -1.11
CXCR4-202ENST00000409817 FBXL18Q96ME1 805 aa8.13□□□□□ -1.11
CXCR4-202ENST00000409817 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.13□□□□□ -1.11
CXCR4-202ENST00000409817 NIFKQ9BYG3 293 aaKnown RBP8.13□□□□□ -1.11
CXCR4-202ENST00000409817 ASCC2Q9H1I8 757 aaPredicted RBP8.13□□□□□ -1.11
CXCR4-202ENST00000409817 MROH8Q9H579 483 aa8.13□□□□□ -1.11
CXCR4-202ENST00000409817 ELP3Q9H9T3 547 aa8.13□□□□□ -1.11
CXCR4-202ENST00000409817 KIAA1586Q9HCI6 787 aa8.13□□□□□ -1.11
CXCR4-202ENST00000409817 CYLDQ9NQC7 956 aa8.13□□□□□ -1.11
CXCR4-202ENST00000409817 ZNF302Q9NR11 478 aa8.13□□□□□ -1.11
CXCR4-202ENST00000409817 ADAMTS1Q9UHI8 967 aa8.13□□□□□ -1.11
CXCR4-202ENST00000409817 SNX12Q9UMY4 172 aa8.13□□□□□ -1.11
CXCR4-202ENST00000409817 MYH9P35579 1960 aaKnown RBP8.13□□□□□ -1.11
CXCR4-202ENST00000409817 SCN4AP35499 1836 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 SYNGAP1Q96PV0 1343 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 A0A087X0T9 212 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 A0A0A6YYK5 440 aaPredicted RBP8.12□□□□□ -1.11
CXCR4-202ENST00000409817 DENND3A2RUS2 1198 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 F8VZ95 297 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 ERLIN1O75477 346 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 FAM228BP0C875 321 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 CNGA1P29973 690 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 KIAA0753Q2KHM9 967 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 METTL7BQ6UX53 244 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 ZNF572Q7Z3I7 529 aaPredicted RBP8.12□□□□□ -1.11
CXCR4-202ENST00000409817 PNMA8AQ86V59 439 aaPredicted RBP8.12□□□□□ -1.11
CXCR4-202ENST00000409817 NCAPG2Q86XI2 1143 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 AFAP1L1Q8TED9 768 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 HNRNPLLQ8WVV9 542 aaKnown RBP8.12□□□□□ -1.11
CXCR4-202ENST00000409817 RUBCNQ92622 972 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 FAM167AQ96KS9 214 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 CBWD1Q9BRT8 395 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 INTS2Q9H0H0 1204 aaKnown RBP8.12□□□□□ -1.11
CXCR4-202ENST00000409817 GPRC5CQ9NQ84 441 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 NRBP2Q9NSY0 501 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 OGFRQ9NZT2 677 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 ARHGAP28Q9P2N2 729 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 EGFL7Q9UHF1 273 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 DDX41Q9UJV9 622 aaKnown RBP8.12□□□□□ -1.11
CXCR4-202ENST00000409817 NAGPAQ9UK23 515 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 DNAJC12Q9UKB3 198 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 RAB21Q9UL25 225 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 HYOU1Q9Y4L1 999 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 PCDHGC5Q9Y5F6 944 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 DUSP10Q9Y6W6 482 aa8.12□□□□□ -1.11
CXCR4-202ENST00000409817 EMSYQ7Z589 1322 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 GLTPD2A6NH11 291 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 GAS2O43903 313 aaKnown RBP8.11□□□□□ -1.11
CXCR4-202ENST00000409817 YBX3P16989 372 aaKnown RBP eCLIP8.11□□□□□ -1.11
CXCR4-202ENST00000409817 NAMPTP43490 491 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 MXI1P50539 228 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 POLGP54098 1239 aaPredicted RBP8.11□□□□□ -1.11
CXCR4-202ENST00000409817 CNTN2Q02246 1040 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 ARID5AQ03989 594 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 SNRNP35Q16560 246 aaKnown RBP8.11□□□□□ -1.11
CXCR4-202ENST00000409817 CBWD6Q4V339 395 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 CBWD3Q5JTY5 395 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 CBWD5Q5RIA9 395 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 CCDC70Q6NSX1 233 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 ALKBH5Q6P6C2 394 aaKnown RBP8.11□□□□□ -1.11
CXCR4-202ENST00000409817 CYFIP1Q7L576 1253 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 ZNF571Q7Z3V5 609 aaPredicted RBP8.11□□□□□ -1.11
CXCR4-202ENST00000409817 SPNS2Q8IVW8 549 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 LMO3Q8TAP4 145 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 LMBR1Q8WVP7 490 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 SLC7A3Q8WY07 619 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 PARD6BQ9BYG5 372 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 DHX33Q9H6R0 707 aaKnown RBP8.11□□□□□ -1.11
CXCR4-202ENST00000409817 ETNK1Q9HBU6 452 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 ARFGAP3Q9NP61 516 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 XPNPEP1Q9NQW7 623 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 PUF60Q9UHX1 559 aaKnown RBP8.11□□□□□ -1.11
CXCR4-202ENST00000409817 NENFQ9UMX5 172 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 SLC45A1Q9Y2W3 748 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 COQ4Q9Y3A0 265 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 CAPN6Q9Y6Q1 641 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 TARSL2A2RTX5 802 aaKnown RBP8.11□□□□□ -1.11
CXCR4-202ENST00000409817 TMEM150BA6NC51 233 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 CES2O00748 559 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 ENC1O14682 589 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 CNMDO75829 334 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 FARP2O94887 1054 aaPredicted RBP8.11□□□□□ -1.11
CXCR4-202ENST00000409817 MOCS3O95396 460 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 PIGRP01833 764 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 H2AFZP0C0S5 128 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 TRIM49P0CI25 452 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 TRIM49CP0CI26 452 aa8.11□□□□□ -1.11
CXCR4-202ENST00000409817 UBA1P22314 1058 aaKnown RBP8.11□□□□□ -1.11
CXCR4-202ENST00000409817 SLC26A2P50443 739 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms