RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 GPM6BQ13491 265 aa24.48■■□□□ 1.51
PTCD3-203ENST00000409783 ALCAMQ13740 583 aa24.48■■□□□ 1.51
PTCD3-203ENST00000409783 NOLC1Q14978 699 aaKnown RBP eCLIP24.48■■□□□ 1.51
PTCD3-203ENST00000409783 FAM26FQ5R3K3 315 aa24.48■■□□□ 1.51
PTCD3-203ENST00000409783 KCNT2Q6UVM3 1135 aa24.48■■□□□ 1.51
PTCD3-203ENST00000409783 KLHL23Q8NBE8 558 aa24.48■■□□□ 1.51
PTCD3-203ENST00000409783 URGCPQ8TCY9 931 aa24.48■■□□□ 1.51
PTCD3-203ENST00000409783 BICD1Q96G01 975 aa24.48■■□□□ 1.51
PTCD3-203ENST00000409783 KANSL3Q9P2N6 904 aa24.48■■□□□ 1.51
PTCD3-203ENST00000409783 PLAGL2Q9UPG8 496 aa24.48■■□□□ 1.51
PTCD3-203ENST00000409783 GDAQ9Y2T3 454 aa24.48■■□□□ 1.51
PTCD3-203ENST00000409783 STYXL1Q9Y6J8 313 aa24.48■■□□□ 1.51
PTCD3-203ENST00000409783 PRRC2BQ5JSZ5 2229 aaKnown RBP24.47■■□□□ 1.51
PTCD3-203ENST00000409783 CLDN3O15551 220 aa24.47■■□□□ 1.51
PTCD3-203ENST00000409783 FAM189A1O60320 539 aa24.47■■□□□ 1.51
PTCD3-203ENST00000409783 PRPF6O94906 941 aaKnown RBP24.47■■□□□ 1.51
PTCD3-203ENST00000409783 ITGB1P05556 798 aa24.47■■□□□ 1.51
PTCD3-203ENST00000409783 HOXD13P35453 343 aa24.47■■□□□ 1.51
PTCD3-203ENST00000409783 PBX3P40426 434 aa24.47■■□□□ 1.51
PTCD3-203ENST00000409783 DSC1Q08554 894 aa24.47■■□□□ 1.51
PTCD3-203ENST00000409783 DPYDQ12882 1025 aa24.47■■□□□ 1.51
PTCD3-203ENST00000409783 SPOUT1Q5T280 376 aaKnown RBP24.47■■□□□ 1.51
PTCD3-203ENST00000409783 ACCSQ96QU6 501 aa24.47■■□□□ 1.51
PTCD3-203ENST00000409783 GAS2L1Q99501 681 aaPredicted RBP24.47■■□□□ 1.51
PTCD3-203ENST00000409783 C11orf84Q9BUA3 381 aaPredicted RBP24.47■■□□□ 1.51
PTCD3-203ENST00000409783 AAASQ9NRG9 546 aa24.47■■□□□ 1.51
PTCD3-203ENST00000409783 DNAJB4Q9UDY4 337 aa24.47■■□□□ 1.51
PTCD3-203ENST00000409783 STXBP5LQ9Y2K9 1186 aa24.47■■□□□ 1.51
PTCD3-203ENST00000409783 A0A0B4J269 797 aa24.46■■□□□ 1.51
PTCD3-203ENST00000409783 PTGESO14684 152 aa24.46■■□□□ 1.51
PTCD3-203ENST00000409783 GRM6O15303 877 aa24.46■■□□□ 1.51
PTCD3-203ENST00000409783 HARSP12081 509 aaKnown RBP24.46■■□□□ 1.51
PTCD3-203ENST00000409783 FOSL2P15408 326 aa24.46■■□□□ 1.51
PTCD3-203ENST00000409783 BCAR1P56945 870 aa24.46■■□□□ 1.51
PTCD3-203ENST00000409783 SEZ6Q53EL9 994 aa24.46■■□□□ 1.51
PTCD3-203ENST00000409783 XKR4Q5GH76 650 aa24.46■■□□□ 1.51
PTCD3-203ENST00000409783 ALKAL1Q6UXT8 129 aa24.46■■□□□ 1.51
PTCD3-203ENST00000409783 THNSL1Q8IYQ7 743 aa24.46■■□□□ 1.51
PTCD3-203ENST00000409783 ZNF558Q96NG5 402 aa24.46■■□□□ 1.51
PTCD3-203ENST00000409783 PCDHB12Q9Y5F1 795 aa24.46■■□□□ 1.51
PTCD3-203ENST00000409783 MTCH2Q9Y6C9 303 aa24.46■■□□□ 1.51
PTCD3-203ENST00000409783 PDCD11Q14690 1871 aaKnown RBP24.46■■□□□ 1.51
PTCD3-203ENST00000409783 NR1I2O75469 434 aa24.45■■□□□ 1.5
PTCD3-203ENST00000409783 GALTP07902 379 aa24.45■■□□□ 1.5
PTCD3-203ENST00000409783 ADSSP30520 456 aa24.45■■□□□ 1.5
PTCD3-203ENST00000409783 OSTNP61366 133 aa24.45■■□□□ 1.5
PTCD3-203ENST00000409783 CAMK1Q14012 370 aa24.45■■□□□ 1.5
PTCD3-203ENST00000409783 NAB2Q15742 525 aa24.45■■□□□ 1.5
PTCD3-203ENST00000409783 KMT5BQ4FZB7 885 aa24.45■■□□□ 1.5
PTCD3-203ENST00000409783 COLGALT2Q8IYK4 626 aa24.45■■□□□ 1.5
PTCD3-203ENST00000409783 SLC39A11Q8N1S5 342 aa24.45■■□□□ 1.5
PTCD3-203ENST00000409783 ZNF507Q8TCN5 953 aa24.45■■□□□ 1.5
PTCD3-203ENST00000409783 SPPL3Q8TCT6 385 aa24.45■■□□□ 1.5
PTCD3-203ENST00000409783 CCDC94Q9BW85 323 aaPredicted RBP24.45■■□□□ 1.5
PTCD3-203ENST00000409783 ALG13Q9NP73 1137 aaKnown RBP24.45■■□□□ 1.5
PTCD3-203ENST00000409783 EIF3DO15371 548 aaKnown RBP eCLIP24.44■■□□□ 1.5
PTCD3-203ENST00000409783 ZC3H11AO75152 810 aaKnown RBP eCLIP24.44■■□□□ 1.5
PTCD3-203ENST00000409783 FGF18O76093 207 aa24.44■■□□□ 1.5
PTCD3-203ENST00000409783 DNAJB1P25685 340 aa24.44■■□□□ 1.5
PTCD3-203ENST00000409783 SLC11A1P49279 550 aa24.44■■□□□ 1.5
PTCD3-203ENST00000409783 RNASELQ05823 741 aaKnown RBP24.44■■□□□ 1.5
PTCD3-203ENST00000409783 GRIK3Q13003 919 aa24.44■■□□□ 1.5
PTCD3-203ENST00000409783 ZBTB41Q5SVQ8 909 aa24.44■■□□□ 1.5
PTCD3-203ENST00000409783 KANK3Q6NY19 840 aa24.44■■□□□ 1.5
PTCD3-203ENST00000409783 TMEM173Q86WV6 379 aaPredicted RBP24.44■■□□□ 1.5
PTCD3-203ENST00000409783 TIGD1Q96MW7 591 aa24.44■■□□□ 1.5
PTCD3-203ENST00000409783 ACAP3Q96P50 834 aa24.44■■□□□ 1.5
PTCD3-203ENST00000409783 GBP3Q9H0R5 595 aa24.44■■□□□ 1.5
PTCD3-203ENST00000409783 LMCD1Q9NZU5 365 aa24.44■■□□□ 1.5
PTCD3-203ENST00000409783 EXOC7Q9UPT5 735 aa24.44■■□□□ 1.5
PTCD3-203ENST00000409783 MYO7AQ13402 2215 aa24.44■■□□□ 1.5
PTCD3-203ENST00000409783 NT5C1B-RDH14C9J2C7 533 aa24.43■■□□□ 1.5
PTCD3-203ENST00000409783 OGTO15294 1046 aa24.43■■□□□ 1.5
PTCD3-203ENST00000409783 RPN1P04843 607 aaKnown RBP24.43■■□□□ 1.5
PTCD3-203ENST00000409783 IGFBP4P22692 258 aa24.43■■□□□ 1.5
PTCD3-203ENST00000409783 PLCB3Q01970 1234 aa24.43■■□□□ 1.5
PTCD3-203ENST00000409783 STK4Q13043 487 aa24.43■■□□□ 1.5
PTCD3-203ENST00000409783 BCL7CQ8WUZ0 217 aaPredicted RBP24.43■■□□□ 1.5
PTCD3-203ENST00000409783 SCFD1Q8WVM8 642 aa24.43■■□□□ 1.5
PTCD3-203ENST00000409783 SNX27Q96L92 541 aa24.43■■□□□ 1.5
PTCD3-203ENST00000409783 RPS6KC1Q96S38 1066 aa24.43■■□□□ 1.5
PTCD3-203ENST00000409783 TMEM175Q9BSA9 504 aa24.43■■□□□ 1.5
PTCD3-203ENST00000409783 SLC39A2Q9NP94 309 aa24.43■■□□□ 1.5
PTCD3-203ENST00000409783 ANK1P16157 1881 aa24.43■■□□□ 1.5
PTCD3-203ENST00000409783 TNFSF9P41273 254 aa24.42■■□□□ 1.5
PTCD3-203ENST00000409783 MATR3P43243 847 aaKnown RBP eCLIP24.42■■□□□ 1.5
PTCD3-203ENST00000409783 ALDH7A1P49419 539 aaKnown RBP24.42■■□□□ 1.5
PTCD3-203ENST00000409783 POSTNQ15063 836 aa24.42■■□□□ 1.5
PTCD3-203ENST00000409783 BMT2Q1RMZ1 405 aa24.42■■□□□ 1.5
PTCD3-203ENST00000409783 SLC10A6Q3KNW5 377 aa24.42■■□□□ 1.5
PTCD3-203ENST00000409783 SLFN12LQ6IEE8 588 aa24.42■■□□□ 1.5
PTCD3-203ENST00000409783 STXBP4Q6ZWJ1 553 aa24.42■■□□□ 1.5
PTCD3-203ENST00000409783 KIAA0895Q8NCT3 520 aa24.42■■□□□ 1.5
PTCD3-203ENST00000409783 MRPL38Q96DV4 380 aaKnown RBP24.42■■□□□ 1.5
PTCD3-203ENST00000409783 PPP1R10Q96QC0 940 aaKnown RBP24.42■■□□□ 1.5
PTCD3-203ENST00000409783 MSTO1Q9BUK6 570 aa24.42■■□□□ 1.5
PTCD3-203ENST00000409783 LMAN2LQ9H0V9 348 aa24.42■■□□□ 1.5
PTCD3-203ENST00000409783 TMEM206Q9H813 350 aa24.42■■□□□ 1.5
PTCD3-203ENST00000409783 EXOC1Q9NV70 894 aa24.42■■□□□ 1.5
PTCD3-203ENST00000409783 SPG21Q9NZD8 308 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms