RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 SYNCRIPO60506 623 aaKnown RBP8.89□□□□□ -0.99
SCN9A-203ENST00000409672 CTNND1O60716 968 aaKnown RBP8.89□□□□□ -0.99
SCN9A-203ENST00000409672 PFDN1O60925 122 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 PALMO75781 387 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 CMA1P23946 247 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 HARS2P49590 506 aaKnown RBP8.89□□□□□ -0.99
SCN9A-203ENST00000409672 ROR1Q01973 937 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 TUBB2AQ13885 445 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 BAATQ14032 418 aaPredicted RBP8.89□□□□□ -0.99
SCN9A-203ENST00000409672 PPP1R18Q6NYC8 613 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 GSPT2Q8IYD1 628 aaKnown RBP8.89□□□□□ -0.99
SCN9A-203ENST00000409672 PDIK1LQ8N165 341 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 TTLL11Q8NHH1 800 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 FMO2Q99518 471 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 TUBB2BQ9BVA1 445 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 TRIM15Q9C019 465 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 MIR1-1HGQ9H1L0 117 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 MCF2P10911 925 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 QARSP47897 775 aaKnown RBP8.89□□□□□ -0.99
SCN9A-203ENST00000409672 CDH18Q13634 790 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 TRIML2Q8N7C3 387 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 FAM167AQ96KS9 214 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 DMAP1Q9NPF5 467 aaPredicted RBP8.89□□□□□ -0.99
SCN9A-203ENST00000409672 PCDHB8Q9UN66 801 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 MAST1Q9Y2H9 1570 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 NCF1BA6NI72 391 aaPredicted RBP8.89□□□□□ -0.99
SCN9A-203ENST00000409672 NCF1CA8MVU1 366 aaPredicted RBP8.89□□□□□ -0.99
SCN9A-203ENST00000409672 EFCAB14O75071 495 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 CYP21A2P08686 494 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 NCF1P14598 390 aaPredicted RBP8.89□□□□□ -0.99
SCN9A-203ENST00000409672 KCNB1Q14721 858 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 POM121L1PQ3SYA9 428 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 DCAF6Q58WW2 860 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 ZMYM1Q5SVZ6 1142 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 TBC1D19Q8N5T2 526 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 NAGPAQ9UK23 515 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 UGGT1Q9NYU2 1555 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 NPHP4O75161 1426 aaPredicted RBP8.89□□□□□ -0.99
SCN9A-203ENST00000409672 NDUFS3O75489 264 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 PRKCBP05771 671 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 HOXB7P09629 217 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 ERVK-10P10266 1014 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 TCF3P15923 654 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 GCFC2P16383 781 aaKnown RBP8.89□□□□□ -0.99
SCN9A-203ENST00000409672 GLB1LQ6UWU2 654 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 ACAD11Q709F0 780 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 KATNAL1Q9BW62 490 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 TSSK1BQ9BXA7 367 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 ZMYND12Q9H0C1 365 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 ZSWIM6Q9HCJ5 1215 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 APPL1Q9UKG1 709 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 PGRMC1O00264 195 aaKnown RBP8.89□□□□□ -0.99
SCN9A-203ENST00000409672 LAD1O00515 517 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 HSPA8P11142 646 aaKnown RBP8.89□□□□□ -0.99
SCN9A-203ENST00000409672 SMTNL2Q2TAL5 461 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 CAMKK1Q8N5S9 505 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 PAGE5Q96GU1 130 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 TCP1P17987 556 aaKnown RBP8.88□□□□□ -0.99
SCN9A-203ENST00000409672 AK8Q96MA6 479 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 RNF26Q9BY78 433 aaPredicted RBP8.88□□□□□ -0.99
SCN9A-203ENST00000409672 ZFYVE16Q7Z3T8 1539 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 KDM5DQ9BY66 1539 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 MYO5CQ9NQX4 1742 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 MYO10Q9HD67 2058 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 DNAJC8O75937 253 aaPredicted RBP8.88□□□□□ -0.99
SCN9A-203ENST00000409672 AVPR1AP37288 418 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 WDR72Q3MJ13 1102 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 TMEM47Q9BQJ4 181 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 SENP6Q9GZR1 1112 aaPredicted RBP8.88□□□□□ -0.99
SCN9A-203ENST00000409672 TMEM39AQ9NV64 488 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 FZD1Q9UP38 647 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 RPS6KA4O75676 772 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 MAP3K6O95382 1288 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 VTNP04004 478 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 KHDRBS2Q5VWX1 349 aaKnown RBP8.88□□□□□ -0.99
SCN9A-203ENST00000409672 TBC1D1Q86TI0 1168 aaPredicted RBP8.88□□□□□ -0.99
SCN9A-203ENST00000409672 ZNF280CQ8ND82 737 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 C1orf54Q8WWF1 131 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 CENPTQ96BT3 561 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 TMEM169Q96HH4 297 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 RBM41Q96IZ5 413 aaKnown RBP8.88□□□□□ -0.99
SCN9A-203ENST00000409672 TRIM55Q9BYV6 548 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 STAP1Q9ULZ2 295 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 PARD3Q8TEW0 1356 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 PGK2P07205 417 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 TRIM49P0CI25 452 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 TRIM49CP0CI26 452 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 NAALADL2Q58DX5 795 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 RCSD1Q6JBY9 416 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 SPIRE2Q8WWL2 714 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 NRBF2Q96F24 287 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 PPP1R13BQ96KQ4 1090 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 TRIM17Q9Y577 477 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 ASB14A6NK59 587 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 SH2B2O14492 632 aaPredicted RBP8.88□□□□□ -0.99
SCN9A-203ENST00000409672 ZNF197O14709 1029 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 PLEKHM3Q6ZWE6 761 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 CCDC197Q8NCU1 140 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 SENP7Q9BQF6 1050 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 TRIM4Q9C037 500 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms