RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 TBX3O15119 743 aa18.79■□□□□ 0.6
SCRN1-203ENST00000409570 GCFC2P16383 781 aaKnown RBP18.79■□□□□ 0.6
SCRN1-203ENST00000409570 CREMQ03060 361 aa18.79■□□□□ 0.6
SCRN1-203ENST00000409570 POU5F1BQ06416 359 aa18.79■□□□□ 0.6
SCRN1-203ENST00000409570 SPIRE1Q08AE8 756 aa18.79■□□□□ 0.6
SCRN1-203ENST00000409570 NCBP1Q09161 790 aaKnown RBP18.79■□□□□ 0.6
SCRN1-203ENST00000409570 GRIK3Q13003 919 aa18.79■□□□□ 0.6
SCRN1-203ENST00000409570 SNW1Q13573 536 aaKnown RBP18.79■□□□□ 0.6
SCRN1-203ENST00000409570 CAPSQ13938 189 aa18.79■□□□□ 0.6
SCRN1-203ENST00000409570 CDR2LQ86X02 465 aaPredicted RBP18.79■□□□□ 0.6
SCRN1-203ENST00000409570 HACE1Q8IYU2 909 aa18.79■□□□□ 0.6
SCRN1-203ENST00000409570 ASAP3Q8TDY4 903 aa18.79■□□□□ 0.6
SCRN1-203ENST00000409570 PAAF1Q9BRP4 392 aa18.79■□□□□ 0.6
SCRN1-203ENST00000409570 TRIM6Q9C030 488 aaPredicted RBP18.79■□□□□ 0.6
SCRN1-203ENST00000409570 ZSWIM4Q9H7M6 989 aa18.79■□□□□ 0.6
SCRN1-203ENST00000409570 KLK14Q9P0G3 267 aa18.79■□□□□ 0.6
SCRN1-203ENST00000409570 CDH7Q9ULB5 785 aa18.79■□□□□ 0.6
SCRN1-203ENST00000409570 ACACBO00763 2458 aa18.79■□□□□ 0.6
SCRN1-203ENST00000409570 ZMYM2Q9UBW7 1377 aa18.79■□□□□ 0.6
SCRN1-203ENST00000409570 CCDC194A0A1B0GVG4 234 aa18.78■□□□□ 0.6
SCRN1-203ENST00000409570 KANSL1LA0AUZ9 987 aa18.78■□□□□ 0.6
SCRN1-203ENST00000409570 B4GALT5O43286 388 aa18.78■□□□□ 0.6
SCRN1-203ENST00000409570 KINO60870 393 aaKnown RBP18.78■□□□□ 0.6
SCRN1-203ENST00000409570 CYP4A11Q02928 519 aa18.78■□□□□ 0.6
SCRN1-203ENST00000409570 TFDP1Q14186 410 aa18.78■□□□□ 0.6
SCRN1-203ENST00000409570 RSPO4Q2I0M5 234 aaPredicted RBP18.78■□□□□ 0.6
SCRN1-203ENST00000409570 NCAPH2Q6IBW4 605 aa18.78■□□□□ 0.6
SCRN1-203ENST00000409570 MTF2Q9Y483 593 aaPredicted RBP18.78■□□□□ 0.6
SCRN1-203ENST00000409570 F5P12259 2224 aa18.77■□□□□ 0.6
SCRN1-203ENST00000409570 KMT2BQ9UMN6 2715 aaPredicted RBP18.77■□□□□ 0.6
SCRN1-203ENST00000409570 CPLX1O14810 134 aa18.77■□□□□ 0.6
SCRN1-203ENST00000409570 CCNT1O60563 726 aaKnown RBP18.77■□□□□ 0.6
SCRN1-203ENST00000409570 TADA2AO75478 443 aa18.77■□□□□ 0.6
SCRN1-203ENST00000409570 SLITRK3O94933 977 aa18.77■□□□□ 0.6
SCRN1-203ENST00000409570 NPTXRO95502 500 aa18.77■□□□□ 0.6
SCRN1-203ENST00000409570 HNRNPA1P09651 372 aaKnown RBP eCLIP18.77■□□□□ 0.6
SCRN1-203ENST00000409570 ARL2P36404 184 aa18.77■□□□□ 0.6
SCRN1-203ENST00000409570 HSP90AA2PQ14568 343 aaPredicted RBP18.77■□□□□ 0.6
SCRN1-203ENST00000409570 MLF2Q15773 248 aaPredicted RBP18.77■□□□□ 0.6
SCRN1-203ENST00000409570 ZNF528Q3MIS6 628 aa18.77■□□□□ 0.6
SCRN1-203ENST00000409570 RUFY3Q7L099 469 aa18.77■□□□□ 0.6
SCRN1-203ENST00000409570 POTEDQ86YR6 584 aa18.77■□□□□ 0.6
SCRN1-203ENST00000409570 FGF13Q92913 245 aa18.77■□□□□ 0.6
SCRN1-203ENST00000409570 ZNF274Q96GC6 653 aaPredicted RBP18.77■□□□□ 0.6
SCRN1-203ENST00000409570 CLSTN3Q9BQT9 956 aa18.77■□□□□ 0.6
SCRN1-203ENST00000409570 LARP6Q9BRS8 491 aaKnown RBP18.77■□□□□ 0.6
SCRN1-203ENST00000409570 PHF20Q9BVI0 1012 aa18.77■□□□□ 0.6
SCRN1-203ENST00000409570 NFKBIZQ9BYH8 718 aa18.77■□□□□ 0.6
SCRN1-203ENST00000409570 SPATA6Q9NWH7 488 aaPredicted RBP18.77■□□□□ 0.6
SCRN1-203ENST00000409570 PARP2Q9UGN5 583 aa18.77■□□□□ 0.6
SCRN1-203ENST00000409570 FBXO4Q9UKT5 387 aa18.77■□□□□ 0.6
SCRN1-203ENST00000409570 SF3B1O75533 1304 aaKnown RBP eCLIP18.76■□□□□ 0.59
SCRN1-203ENST00000409570 A0A1B0GUA9 196 aa18.76■□□□□ 0.59
SCRN1-203ENST00000409570 CCL16O15467 120 aa18.76■□□□□ 0.59
SCRN1-203ENST00000409570 GLRA2P23416 452 aa18.76■□□□□ 0.59
SCRN1-203ENST00000409570 PRKCQQ04759 706 aa18.76■□□□□ 0.59
SCRN1-203ENST00000409570 SLC44A4Q53GD3 710 aa18.76■□□□□ 0.59
SCRN1-203ENST00000409570 SLC27A1Q6PCB7 646 aa18.76■□□□□ 0.59
SCRN1-203ENST00000409570 MTSS1LQ765P7 747 aa18.76■□□□□ 0.59
SCRN1-203ENST00000409570 CENPQQ7L2Z9 268 aaPredicted RBP18.76■□□□□ 0.59
SCRN1-203ENST00000409570 TPH2Q8IWU9 490 aa18.76■□□□□ 0.59
SCRN1-203ENST00000409570 ITFG1Q8TB96 612 aa18.76■□□□□ 0.59
SCRN1-203ENST00000409570 LNX1Q8TBB1 728 aaPredicted RBP18.76■□□□□ 0.59
SCRN1-203ENST00000409570 HASPINQ8TF76 798 aa18.76■□□□□ 0.59
SCRN1-203ENST00000409570 PIK3R5Q8WYR1 880 aa18.76■□□□□ 0.59
SCRN1-203ENST00000409570 BCO2Q9BYV7 579 aa18.76■□□□□ 0.59
SCRN1-203ENST00000409570 OSBPL6Q9BZF3 934 aa18.76■□□□□ 0.59
SCRN1-203ENST00000409570 ZSWIM6Q9HCJ5 1215 aa18.76■□□□□ 0.59
SCRN1-203ENST00000409570 SPTLC1O15269 473 aa18.75■□□□□ 0.59
SCRN1-203ENST00000409570 ADAM12O43184 909 aa18.75■□□□□ 0.59
SCRN1-203ENST00000409570 LAMTOR5O43504 91 aa18.75■□□□□ 0.59
SCRN1-203ENST00000409570 MARCH6O60337 910 aa18.75■□□□□ 0.59
SCRN1-203ENST00000409570 C8AP07357 584 aa18.75■□□□□ 0.59
SCRN1-203ENST00000409570 HOXA9P31269 272 aa18.75■□□□□ 0.59
SCRN1-203ENST00000409570 TUSC3Q13454 348 aa18.75■□□□□ 0.59
SCRN1-203ENST00000409570 UBXN2BQ14CS0 331 aa18.75■□□□□ 0.59
SCRN1-203ENST00000409570 PSMD5Q16401 504 aa18.75■□□□□ 0.59
SCRN1-203ENST00000409570 PPM1LQ5SGD2 360 aa18.75■□□□□ 0.59
SCRN1-203ENST00000409570 VARS2Q5ST30 1063 aaKnown RBP18.75■□□□□ 0.59
SCRN1-203ENST00000409570 LIN9Q5TKA1 542 aa18.75■□□□□ 0.59
SCRN1-203ENST00000409570 PIK3AP1Q6ZUJ8 805 aa18.75■□□□□ 0.59
SCRN1-203ENST00000409570 OXER1Q8TDS5 423 aa18.75■□□□□ 0.59
SCRN1-203ENST00000409570 BORCS6Q96GS4 357 aa18.75■□□□□ 0.59
SCRN1-203ENST00000409570 TTPALQ9BTX7 342 aa18.75■□□□□ 0.59
SCRN1-203ENST00000409570 CASTOR2A6NHX0 329 aa18.74■□□□□ 0.59
SCRN1-203ENST00000409570 FAM170BA6NMN3 283 aa18.74■□□□□ 0.59
SCRN1-203ENST00000409570 DGAT1O75907 488 aa18.74■□□□□ 0.59
SCRN1-203ENST00000409570 KIF4AO95239 1232 aa18.74■□□□□ 0.59
SCRN1-203ENST00000409570 LYPLA2O95372 231 aa18.74■□□□□ 0.59
SCRN1-203ENST00000409570 STK3Q13188 491 aa18.74■□□□□ 0.59
SCRN1-203ENST00000409570 EARS2Q5JPH6 523 aaKnown RBP18.74■□□□□ 0.59
SCRN1-203ENST00000409570 FAM171A1Q5VUB5 890 aa18.74■□□□□ 0.59
SCRN1-203ENST00000409570 ERICH6BQ5W0A0 696 aa18.74■□□□□ 0.59
SCRN1-203ENST00000409570 RSPO2Q6UXX9 243 aaPredicted RBP18.74■□□□□ 0.59
SCRN1-203ENST00000409570 CEP57Q86XR8 500 aa18.74■□□□□ 0.59
SCRN1-203ENST00000409570 KXD1Q9BQD3 176 aa18.74■□□□□ 0.59
SCRN1-203ENST00000409570 EIF2AK1Q9BQI3 630 aaKnown RBP18.74■□□□□ 0.59
SCRN1-203ENST00000409570 LTB4R2Q9NPC1 389 aa18.74■□□□□ 0.59
SCRN1-203ENST00000409570 GJB4Q9NTQ9 266 aa18.74■□□□□ 0.59
SCRN1-203ENST00000409570 ANKEF1Q9NU02 776 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms