RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 ANKRD63C9JTQ0 380 aa18.02■□□□□ 0.48
TSPAN4-208ENST00000409531 FGFR1OPO95684 399 aaKnown RBP18.02■□□□□ 0.48
TSPAN4-208ENST00000409531 PROZP22891 400 aa18.02■□□□□ 0.48
TSPAN4-208ENST00000409531 HOXA11P31270 313 aaPredicted RBP18.02■□□□□ 0.48
TSPAN4-208ENST00000409531 ZNF165P49910 485 aa18.02■□□□□ 0.48
TSPAN4-208ENST00000409531 DSC3Q14574 896 aa18.02■□□□□ 0.48
TSPAN4-208ENST00000409531 NOLC1Q14978 699 aaKnown RBP eCLIP18.02■□□□□ 0.48
TSPAN4-208ENST00000409531 TPD52L1Q16890 204 aaPredicted RBP18.02■□□□□ 0.48
TSPAN4-208ENST00000409531 DCAF4L1Q3SXM0 396 aa18.02■□□□□ 0.48
TSPAN4-208ENST00000409531 ZNF568Q3ZCX4 644 aa18.02■□□□□ 0.48
TSPAN4-208ENST00000409531 ZCWPW2Q504Y3 356 aa18.02■□□□□ 0.48
TSPAN4-208ENST00000409531 ANKRD40Q6AI12 368 aa18.02■□□□□ 0.48
TSPAN4-208ENST00000409531 TWF2Q6IBS0 349 aaKnown RBP18.02■□□□□ 0.48
TSPAN4-208ENST00000409531 SLC39A4Q6P5W5 647 aa18.02■□□□□ 0.48
TSPAN4-208ENST00000409531 NPAS4Q8IUM7 802 aa18.02■□□□□ 0.48
TSPAN4-208ENST00000409531 TMEM174Q8WUU8 243 aa18.02■□□□□ 0.48
TSPAN4-208ENST00000409531 GAS2L1Q99501 681 aaPredicted RBP18.02■□□□□ 0.48
TSPAN4-208ENST00000409531 PDZD7Q9H5P4 517 aa18.02■□□□□ 0.48
TSPAN4-208ENST00000409531 CERS4Q9HA82 394 aa18.02■□□□□ 0.48
TSPAN4-208ENST00000409531 PTPRHQ9HD43 1115 aa18.02■□□□□ 0.48
TSPAN4-208ENST00000409531 UNC80Q8N2C7 3258 aa18.02■□□□□ 0.48
TSPAN4-208ENST00000409531 A0A0B4J269 797 aa18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 C9IYK1 514 aa18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 DGKIO75912 1065 aa18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 LDHAP00338 332 aaKnown RBP18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 MCF2P10911 925 aa18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 FOSL2P15408 326 aa18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 STX17P56962 302 aa18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 ERVK-21P61565 698 aa18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 FAM189BP81408 668 aa18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 FKBP3Q00688 224 aaKnown RBP18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 MCL1Q07820 350 aa18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 KYAT1Q16773 422 aa18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 TTI2Q6NXR4 508 aa18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 SLC9A9Q8IVB4 645 aa18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 ENOX1Q8TC92 643 aaKnown RBP18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 ARNTL2Q8WYA1 636 aa18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 ZNF689Q96CS4 500 aaPredicted RBP18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 TGS1Q96RS0 853 aaKnown RBP18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 TRIM6Q9C030 488 aaPredicted RBP18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 LRFN2Q9ULH4 789 aa18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 USP20Q9Y2K6 914 aa18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 PCDHB7Q9Y5E2 793 aa18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 CITO14578 2027 aa18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 CDH23Q9H251 3354 aa18.01■□□□□ 0.47
TSPAN4-208ENST00000409531 TRIM49BA6NDI0 452 aa18■□□□□ 0.47
TSPAN4-208ENST00000409531 SMTNL1A8MU46 457 aa18■□□□□ 0.47
TSPAN4-208ENST00000409531 CETN3O15182 167 aa18■□□□□ 0.47
TSPAN4-208ENST00000409531 CLIC2O15247 247 aa18■□□□□ 0.47
TSPAN4-208ENST00000409531 NR3C1P04150 777 aa18■□□□□ 0.47
TSPAN4-208ENST00000409531 SKIP12755 728 aa18■□□□□ 0.47
TSPAN4-208ENST00000409531 NR2F2P24468 414 aa18■□□□□ 0.47
TSPAN4-208ENST00000409531 ADSSP30520 456 aa18■□□□□ 0.47
TSPAN4-208ENST00000409531 RAB27AP51159 221 aa18■□□□□ 0.47
TSPAN4-208ENST00000409531 PMS1P54277 932 aaKnown RBP18■□□□□ 0.47
TSPAN4-208ENST00000409531 MYL5Q02045 173 aa18■□□□□ 0.47
TSPAN4-208ENST00000409531 ADAM9Q13443 819 aa18■□□□□ 0.47
TSPAN4-208ENST00000409531 CSGALNACT2Q8N6G5 542 aa18■□□□□ 0.47
TSPAN4-208ENST00000409531 CEP63Q96MT8 703 aa18■□□□□ 0.47
TSPAN4-208ENST00000409531 MSTO1Q9BUK6 570 aa18■□□□□ 0.47
TSPAN4-208ENST00000409531 TRAIPQ9BWF2 469 aa18■□□□□ 0.47
TSPAN4-208ENST00000409531 IKZF4Q9H2S9 585 aa18■□□□□ 0.47
TSPAN4-208ENST00000409531 KIAA1586Q9HCI6 787 aa18■□□□□ 0.47
TSPAN4-208ENST00000409531 AGO2Q9UKV8 859 aaKnown RBP18■□□□□ 0.47
TSPAN4-208ENST00000409531 BECN2A8MW95 431 aa17.99■□□□□ 0.47
TSPAN4-208ENST00000409531 TISP43B9A030 160 aa17.99■□□□□ 0.47
TSPAN4-208ENST00000409531 ABLIM1O14639 778 aa17.99■□□□□ 0.47
TSPAN4-208ENST00000409531 IKBKBO14920 756 aa17.99■□□□□ 0.47
TSPAN4-208ENST00000409531 OGTO15294 1046 aa17.99■□□□□ 0.47
TSPAN4-208ENST00000409531 SPATA1Q5VX52 437 aa17.99■□□□□ 0.47
TSPAN4-208ENST00000409531 EEF1DP3Q658K8 133 aa17.99■□□□□ 0.47
TSPAN4-208ENST00000409531 ZBTB33Q86T24 672 aa17.99■□□□□ 0.47
TSPAN4-208ENST00000409531 HACE1Q8IYU2 909 aa17.99■□□□□ 0.47
TSPAN4-208ENST00000409531 FIBCD1Q8N539 461 aa17.99■□□□□ 0.47
TSPAN4-208ENST00000409531 XXYLT1Q8NBI6 393 aa17.99■□□□□ 0.47
TSPAN4-208ENST00000409531 FAM200AQ8TCP9 573 aa17.99■□□□□ 0.47
TSPAN4-208ENST00000409531 NOC3LQ8WTT2 800 aaKnown RBP17.99■□□□□ 0.47
TSPAN4-208ENST00000409531 ZBTB45Q96K62 511 aaPredicted RBP17.99■□□□□ 0.47
TSPAN4-208ENST00000409531 CBWD1Q9BRT8 395 aa17.99■□□□□ 0.47
TSPAN4-208ENST00000409531 CDT1Q9H211 546 aa17.99■□□□□ 0.47
TSPAN4-208ENST00000409531 ELAC1Q9H777 363 aaKnown RBP17.99■□□□□ 0.47
TSPAN4-208ENST00000409531 RC3H2Q9HBD1 1191 aaKnown RBP17.99■□□□□ 0.47
TSPAN4-208ENST00000409531 DMAC2Q9NW81 257 aa17.99■□□□□ 0.47
TSPAN4-208ENST00000409531 HSPBP1Q9NZL4 362 aa17.99■□□□□ 0.47
TSPAN4-208ENST00000409531 FRMD4BQ9Y2L6 1034 aa17.99■□□□□ 0.47
TSPAN4-208ENST00000409531 RFXAPO00287 272 aa17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 EXOC3O60645 756 aa17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 NPTXRO95502 500 aa17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 HARSP12081 509 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 CYP2J2P51589 502 aa17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 BTG3Q14201 252 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 ADGRE1Q14246 886 aa17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 SPRED2Q7Z698 418 aa17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 CDR2LQ86X02 465 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 ZC3H3Q8IXZ2 948 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 GPD1LQ8N335 351 aa17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 SAMD11Q96NU1 681 aa17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 DUSP9Q99956 384 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 PCIF1Q9H4Z3 704 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms