RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 ZNF516Q92618 1163 aa22.33■■□□□ 1.17
USP39-203ENST00000409470 MS4A14Q96JA4 679 aa22.33■■□□□ 1.17
USP39-203ENST00000409470 FAM84AQ96KN4 292 aa22.33■■□□□ 1.17
USP39-203ENST00000409470 JPH2Q9BR39 696 aaPredicted RBP22.33■■□□□ 1.17
USP39-203ENST00000409470 GOLPH3Q9H4A6 298 aa22.33■■□□□ 1.17
USP39-203ENST00000409470 PDE11AQ9HCR9 933 aa22.33■■□□□ 1.17
USP39-203ENST00000409470 ATP8B1O43520 1251 aa22.33■■□□□ 1.16
USP39-203ENST00000409470 HARSP12081 509 aaKnown RBP22.33■■□□□ 1.16
USP39-203ENST00000409470 MKRN4PQ13434 485 aaPredicted RBP22.33■■□□□ 1.16
USP39-203ENST00000409470 WDR93Q6P2C0 686 aa22.33■■□□□ 1.16
USP39-203ENST00000409470 CRELD2Q6UXH1 353 aaPredicted RBP22.33■■□□□ 1.16
USP39-203ENST00000409470 ZBTB8OSQ8IWT0 167 aa22.33■■□□□ 1.16
USP39-203ENST00000409470 SYCE1Q8N0S2 351 aa22.33■■□□□ 1.16
USP39-203ENST00000409470 C2orf69Q8N8R5 385 aa22.33■■□□□ 1.16
USP39-203ENST00000409470 RNF149Q8NC42 400 aa22.33■■□□□ 1.16
USP39-203ENST00000409470 RFFLQ8WZ73 363 aa22.33■■□□□ 1.16
USP39-203ENST00000409470 TATDN2Q93075 761 aa22.33■■□□□ 1.16
USP39-203ENST00000409470 ELMO3Q96BJ8 720 aa22.33■■□□□ 1.16
USP39-203ENST00000409470 PI4K2AQ9BTU6 479 aa22.33■■□□□ 1.16
USP39-203ENST00000409470 NCANO14594 1321 aa22.33■■□□□ 1.16
USP39-203ENST00000409470 ANKRD62A6NC57 917 aa22.32■■□□□ 1.16
USP39-203ENST00000409470 ZC3H11AO75152 810 aaKnown RBP eCLIP22.32■■□□□ 1.16
USP39-203ENST00000409470 CLDN10P78369 228 aa22.32■■□□□ 1.16
USP39-203ENST00000409470 BIRC3Q13489 604 aa22.32■■□□□ 1.16
USP39-203ENST00000409470 TAF3Q5VWG9 929 aa22.32■■□□□ 1.16
USP39-203ENST00000409470 C15orf39Q6ZRI6 1047 aa22.32■■□□□ 1.16
USP39-203ENST00000409470 DAAM2Q86T65 1068 aa22.32■■□□□ 1.16
USP39-203ENST00000409470 KRT222Q8N1A0 295 aa22.32■■□□□ 1.16
USP39-203ENST00000409470 MMGT1Q8N4V1 131 aa22.32■■□□□ 1.16
USP39-203ENST00000409470 SLC35G2Q8TBE7 412 aa22.32■■□□□ 1.16
USP39-203ENST00000409470 EPS8L1Q8TE68 723 aa22.32■■□□□ 1.16
USP39-203ENST00000409470 MRPL4Q9BYD3 311 aaKnown RBP22.32■■□□□ 1.16
USP39-203ENST00000409470 C1orf112Q9NSG2 853 aa22.32■■□□□ 1.16
USP39-203ENST00000409470 SUCLA2Q9P2R7 463 aaPredicted RBP22.32■■□□□ 1.16
USP39-203ENST00000409470 IGKV6-21A0A0C4DH24 114 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 TARSL2A2RTX5 802 aaKnown RBP22.31■■□□□ 1.16
USP39-203ENST00000409470 CLDN3O15551 220 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 STRNO43815 780 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 HBP1O60381 514 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 MCM3P25205 808 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 WNT7BP56706 349 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 LAMC2Q13753 1193 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 WDR44Q5JSH3 913 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 ZBTB41Q5SVQ8 909 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 ZPBP2Q6X784 338 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 PEX26Q7Z412 305 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 NOP9Q86U38 636 aaKnown RBP22.31■■□□□ 1.16
USP39-203ENST00000409470 SLC47A2Q86VL8 602 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 TRAPPC12Q8WVT3 735 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 THAP2Q9H0W7 228 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 VTA1Q9NP79 307 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 KIF4AO95239 1232 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 CELF2O95319 508 aaKnown RBP22.31■■□□□ 1.16
USP39-203ENST00000409470 TBC1D8O95759 1140 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 PIK3CAP42336 1068 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 PTPROQ16827 1216 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 ENOSF1Q7L5Y1 443 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 RHPN2Q8IUC4 686 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 ABRAQ8N0Z2 381 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 TCHPQ9BT92 498 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 ABCB6Q9NP58 842 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 OSGEPQ9NPF4 335 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 FAM53CQ9NYF3 392 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 MORF4L1Q9UBU8 362 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 NOCTQ9UK39 431 aaKnown RBP22.31■■□□□ 1.16
USP39-203ENST00000409470 PLXNB2O15031 1838 aa22.31■■□□□ 1.16
USP39-203ENST00000409470 ADGRA2Q96PE1 1338 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 KCNK3O14649 394 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 FTLP02792 175 aaPredicted RBP22.3■■□□□ 1.16
USP39-203ENST00000409470 C4BPAP04003 597 aaKnown RBP22.3■■□□□ 1.16
USP39-203ENST00000409470 ARHGAP1Q07960 439 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 MAPK6Q16659 721 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 ZACNQ401N2 412 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 GJC2Q5T442 439 aaPredicted RBP22.3■■□□□ 1.16
USP39-203ENST00000409470 CDCA2Q69YH5 1023 aaPredicted RBP22.3■■□□□ 1.16
USP39-203ENST00000409470 TAPT1Q6NXT6 567 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 FAM81BQ96LP2 452 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 C2orf40Q9H1Z8 148 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 ERAP1Q9NZ08 941 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 PLXNA1Q9UIW2 1896 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 MSCO60682 206 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 GH1P01241 217 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 HLA-DRAP01903 254 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 PRKCBP05771 671 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 KRT5P13647 590 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 PDE6CP51160 858 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 GCNT1Q02742 428 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 BEND6Q5SZJ8 279 aaPredicted RBP22.3■■□□□ 1.16
USP39-203ENST00000409470 TDRD10Q5VZ19 366 aaKnown RBP22.3■■□□□ 1.16
USP39-203ENST00000409470 SLFN11Q7Z7L1 901 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 ZBTB33Q86T24 672 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 METTL13Q8N6R0 699 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 DHX38Q92620 1227 aaKnown RBP22.3■■□□□ 1.16
USP39-203ENST00000409470 ARHGEF26Q96DR7 871 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 CCDC113Q9H0I3 377 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 ACP6Q9NPH0 428 aa22.3■■□□□ 1.16
USP39-203ENST00000409470 PTPRJQ12913 1337 aa22.29■■□□□ 1.16
USP39-203ENST00000409470 TTLL13PA6NNM8 815 aa22.29■■□□□ 1.16
USP39-203ENST00000409470 TOM1L1O75674 476 aa22.29■■□□□ 1.16
USP39-203ENST00000409470 CYP11B1P15538 503 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms