RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 DHX40Q8IX18 779 aaKnown RBP15.37■□□□□ 0.05
CHRNA1-204ENST00000409323 GPD1LQ8N335 351 aa15.37■□□□□ 0.05
CHRNA1-204ENST00000409323 XXYLT1Q8NBI6 393 aa15.37■□□□□ 0.05
CHRNA1-204ENST00000409323 FTHL17Q9BXU8 183 aa15.37■□□□□ 0.05
CHRNA1-204ENST00000409323 SAMSN1Q9NSI8 373 aaKnown RBP15.37■□□□□ 0.05
CHRNA1-204ENST00000409323 NFE2L3Q9Y4A8 694 aa15.37■□□□□ 0.05
CHRNA1-204ENST00000409323 TTC3P53804 2025 aa15.37■□□□□ 0.05
CHRNA1-204ENST00000409323 A0A0U1RQF3 1178 aa15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 RECQL4O94761 1208 aa15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 WDR5P61964 334 aaKnown RBP15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 EDRF1Q3B7T1 1238 aa15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 GLRA4Q5JXX5 417 aa15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 LMBRD2Q68DH5 695 aaPredicted RBP15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 SLC24A5Q71RS6 500 aa15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 GOLGA5Q8TBA6 731 aa15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 ZFP42Q96MM3 310 aa15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 DMAC2Q9NW81 257 aa15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 INPP5FQ9Y2H2 1132 aa15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 ANK1P16157 1881 aa15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 PDE4DIPQ5VU43 2346 aa15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 EXTL3O43909 919 aa15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 ITGA4P13612 1032 aa15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 RGS19P49795 217 aa15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 FKBP3Q00688 224 aaKnown RBP15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 NCAPHQ15003 741 aa15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 ENOX2Q16206 610 aaKnown RBP15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 SNRNP35Q16560 246 aaKnown RBP15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 AGMOQ6ZNB7 445 aa15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 CCDC51Q96ER9 411 aa15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 NAT10Q9H0A0 1025 aaKnown RBP15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 FANCLQ9NW38 375 aa15.36■□□□□ 0.05
CHRNA1-204ENST00000409323 CETN3O15182 167 aa15.35■□□□□ 0.05
CHRNA1-204ENST00000409323 PFKMP08237 780 aa15.35■□□□□ 0.05
CHRNA1-204ENST00000409323 ACTN1P12814 892 aa15.35■□□□□ 0.05
CHRNA1-204ENST00000409323 MLH1P40692 756 aa15.35■□□□□ 0.05
CHRNA1-204ENST00000409323 GRM5P41594 1212 aa15.35■□□□□ 0.05
CHRNA1-204ENST00000409323 MYL5Q02045 173 aa15.35■□□□□ 0.05
CHRNA1-204ENST00000409323 IQCB1Q15051 598 aa15.35■□□□□ 0.05
CHRNA1-204ENST00000409323 SPATA1Q5VX52 437 aa15.35■□□□□ 0.05
CHRNA1-204ENST00000409323 C12orf56Q8IXR9 622 aa15.35■□□□□ 0.05
CHRNA1-204ENST00000409323 ENOX1Q8TC92 643 aaKnown RBP15.35■□□□□ 0.05
CHRNA1-204ENST00000409323 PLEKHO2Q8TD55 490 aa15.35■□□□□ 0.05
CHRNA1-204ENST00000409323 CCDC127Q96BQ5 260 aa15.35■□□□□ 0.05
CHRNA1-204ENST00000409323 ACAP3Q96P50 834 aa15.35■□□□□ 0.05
CHRNA1-204ENST00000409323 GAD1Q99259 594 aa15.35■□□□□ 0.05
CHRNA1-204ENST00000409323 POP1Q99575 1024 aaKnown RBP15.35■□□□□ 0.05
CHRNA1-204ENST00000409323 CCDC94Q9BW85 323 aaPredicted RBP15.35■□□□□ 0.05
CHRNA1-204ENST00000409323 MMRN2Q9H8L6 949 aa15.35■□□□□ 0.05
CHRNA1-204ENST00000409323 PDE11AQ9HCR9 933 aa15.35■□□□□ 0.05
CHRNA1-204ENST00000409323 RBAKQ9NYW8 714 aaPredicted RBP15.35■□□□□ 0.05
CHRNA1-204ENST00000409323 CPSF3Q9UKF6 684 aaKnown RBP15.35■□□□□ 0.05
CHRNA1-204ENST00000409323 LRFN2Q9ULH4 789 aa15.35■□□□□ 0.05
CHRNA1-204ENST00000409323 FRMD4BQ9Y2L6 1034 aa15.35■□□□□ 0.05
CHRNA1-204ENST00000409323 ABHD14A-ACY1A0A1B0GW23 586 aa15.34■□□□□ 0.05
CHRNA1-204ENST00000409323 RPL13P26373 211 aaKnown RBP15.34■□□□□ 0.05
CHRNA1-204ENST00000409323 DLG4P78352 724 aa15.34■□□□□ 0.05
CHRNA1-204ENST00000409323 SHHQ15465 462 aa15.34■□□□□ 0.05
CHRNA1-204ENST00000409323 SLC10A6Q3KNW5 377 aa15.34■□□□□ 0.05
CHRNA1-204ENST00000409323 CCDC40Q4G0X9 1142 aa15.34■□□□□ 0.05
CHRNA1-204ENST00000409323 PAN2Q504Q3 1202 aaKnown RBP15.34■□□□□ 0.05
CHRNA1-204ENST00000409323 CLLU1OSQ5K130 101 aa15.34■□□□□ 0.05
CHRNA1-204ENST00000409323 PSRC1Q6PGN9 363 aaPredicted RBP15.34■□□□□ 0.05
CHRNA1-204ENST00000409323 ZNF598Q86UK7 904 aaKnown RBP15.34■□□□□ 0.05
CHRNA1-204ENST00000409323 IRF2BP1Q8IU81 584 aa15.34■□□□□ 0.05
CHRNA1-204ENST00000409323 SLC9A9Q8IVB4 645 aa15.34■□□□□ 0.05
CHRNA1-204ENST00000409323 FAM186BQ8IYM0 893 aa15.34■□□□□ 0.05
CHRNA1-204ENST00000409323 HELQQ8TDG4 1101 aa15.34■□□□□ 0.05
CHRNA1-204ENST00000409323 RPF1Q9H9Y2 349 aaKnown RBP15.34■□□□□ 0.05
CHRNA1-204ENST00000409323 TOPORSQ9NS56 1045 aaPredicted RBP15.34■□□□□ 0.05
CHRNA1-204ENST00000409323 C1orf112Q9NSG2 853 aa15.34■□□□□ 0.05
CHRNA1-204ENST00000409323 CGNQ9P2M7 1197 aaKnown RBP15.34■□□□□ 0.05
CHRNA1-204ENST00000409323 HCSTQ9UBK5 93 aa15.34■□□□□ 0.05
CHRNA1-204ENST00000409323 CACNG4Q9UBN1 327 aa15.34■□□□□ 0.05
CHRNA1-204ENST00000409323 PLAGL2Q9UPG8 496 aa15.34■□□□□ 0.05
CHRNA1-204ENST00000409323 PCDHB7Q9Y5E2 793 aa15.34■□□□□ 0.05
CHRNA1-204ENST00000409323 ZNF233A6NK53 670 aa15.33■□□□□ 0.05
CHRNA1-204ENST00000409323 BECN2A8MW95 431 aa15.33■□□□□ 0.05
CHRNA1-204ENST00000409323 LACTBL1A8MY62 500 aa15.33■□□□□ 0.05
CHRNA1-204ENST00000409323 CLTAP09496 248 aa15.33■□□□□ 0.05
CHRNA1-204ENST00000409323 TRIM49P0CI25 452 aa15.33■□□□□ 0.05
CHRNA1-204ENST00000409323 TRIM49CP0CI26 452 aa15.33■□□□□ 0.05
CHRNA1-204ENST00000409323 DLATP10515 647 aaKnown RBP15.33■□□□□ 0.05
CHRNA1-204ENST00000409323 KCNJ6P48051 423 aa15.33■□□□□ 0.05
CHRNA1-204ENST00000409323 RAB27AP51159 221 aa15.33■□□□□ 0.05
CHRNA1-204ENST00000409323 SNRPFP62306 86 aaKnown RBP15.33■□□□□ 0.05
CHRNA1-204ENST00000409323 FAM189BP81408 668 aa15.33■□□□□ 0.05
CHRNA1-204ENST00000409323 MLLT1Q03111 559 aaPredicted RBP15.33■□□□□ 0.05
CHRNA1-204ENST00000409323 APBB1IPQ7Z5R6 666 aaPredicted RBP15.33■□□□□ 0.05
CHRNA1-204ENST00000409323 ZC3H3Q8IXZ2 948 aaKnown RBP15.33■□□□□ 0.05
CHRNA1-204ENST00000409323 FAM200AQ8TCP9 573 aa15.33■□□□□ 0.05
CHRNA1-204ENST00000409323 CNOT6LQ96LI5 555 aaKnown RBP15.33■□□□□ 0.05
CHRNA1-204ENST00000409323 FBXL18Q96ME1 805 aa15.33■□□□□ 0.05
CHRNA1-204ENST00000409323 UBE2OQ9C0C9 1292 aaKnown RBP15.33■□□□□ 0.05
CHRNA1-204ENST00000409323 RBSNQ9H1K0 784 aa15.33■□□□□ 0.05
CHRNA1-204ENST00000409323 HSD3B7Q9H2F3 369 aa15.33■□□□□ 0.05
CHRNA1-204ENST00000409323 RSAD1Q9HA92 442 aa15.33■□□□□ 0.05
CHRNA1-204ENST00000409323 MIOSQ9NXC5 875 aa15.33■□□□□ 0.05
CHRNA1-204ENST00000409323 ZNF623O75123 536 aa15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 LDHAP00338 332 aaKnown RBP15.32■□□□□ 0.04
CHRNA1-204ENST00000409323 POMCP01189 267 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms