RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 KRT25Q7Z3Z0 450 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 MRPL10Q7Z7H8 261 aaKnown RBP8.63□□□□□ -1.03
LSM5-202ENST00000409292 ZNF280BQ86YH2 543 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 GPR65Q8IYL9 337 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 SLC44A3Q8N4M1 653 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 FAM20AQ96MK3 541 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 JAKMIP1Q96N16 626 aaKnown RBP8.63□□□□□ -1.03
LSM5-202ENST00000409292 VPS54Q9P1Q0 977 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 NCDNQ9UBB6 729 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 PCDHA4Q9UN74 947 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 PLXNA3P51805 1871 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 SPTBN4Q9H254 2564 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 CCDC194A0A1B0GVG4 234 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 INO80B-WBP1J3KQ70 363 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 TEX28O15482 410 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 LAMTOR5O43504 91 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 XYLBO75191 536 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 TADA2AO75478 443 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 CDKL5O76039 1030 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 DDHD2O94830 711 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 DEXIO95424 95 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 P4HBP07237 508 aaKnown RBP8.62□□□□□ -1.03
LSM5-202ENST00000409292 GCFC2P16383 781 aaKnown RBP8.62□□□□□ -1.03
LSM5-202ENST00000409292 IFNAR1P17181 557 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 FSHRP23945 695 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 FOXC1Q12948 553 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 DRP2Q13474 957 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 TMEM132AQ24JP5 1023 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 AGMOQ6ZNB7 445 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 GET4Q7L5D6 327 aaPredicted RBP8.62□□□□□ -1.03
LSM5-202ENST00000409292 PALB2Q86YC2 1186 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 C1orf210Q8IVY1 113 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 KIAA2013Q8IYS2 634 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 BLIDQ8IZY5 108 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 RNF149Q8NC42 400 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 GPR152Q8TDT2 470 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 BCL7CQ8WUZ0 217 aaPredicted RBP8.62□□□□□ -1.03
LSM5-202ENST00000409292 PRPF31Q8WWY3 499 aaKnown RBP8.62□□□□□ -1.03
LSM5-202ENST00000409292 ATRIPQ8WXE1 791 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 RIN2Q8WYP3 895 aaPredicted RBP8.62□□□□□ -1.03
LSM5-202ENST00000409292 LENG9Q96B70 501 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 RXFP1Q9HBX9 757 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 MRPS17Q9Y2R5 130 aaKnown RBP8.62□□□□□ -1.03
LSM5-202ENST00000409292 GIT1Q9Y2X7 761 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 R4GN57 208 aa8.62□□□□□ -1.03
LSM5-202ENST00000409292 SF3B1O75533 1304 aaKnown RBP eCLIP8.61□□□□□ -1.033e-7■■■■■ 27.3
LSM5-202ENST00000409292 CYP3A7-CYP3A51PA0A087WV96 503 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 SPTLC1O15269 473 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 NARSO43776 548 aaKnown RBP8.61□□□□□ -1.03
LSM5-202ENST00000409292 LILRB3O75022 631 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 DXOO77932 396 aaKnown RBP8.61□□□□□ -1.03
LSM5-202ENST00000409292 REC8O95072 547 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 HNRNPA1P09651 372 aaKnown RBP eCLIP8.61□□□□□ -1.03
LSM5-202ENST00000409292 LAMP2P13473 410 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 CYP3A7P24462 503 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 DSG1Q02413 1049 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 PRKCQQ04759 706 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 LAMTOR4Q0VGL1 99 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 ELAVL2Q12926 359 aaKnown RBP8.61□□□□□ -1.03
LSM5-202ENST00000409292 PPP2R5DQ14738 602 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 ADCK5Q3MIX3 580 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 XKR9Q5GH70 373 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 ZNF787Q6DD87 383 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 KSR1Q8IVT5 923 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 SLFN12Q8IYM2 578 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 NELL2Q99435 816 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 SH2D3AQ9BRG2 576 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 APOL6Q9BWW8 343 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 NT5C3AQ9H0P0 336 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 ZSWIM4Q9H7M6 989 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 IFT122Q9HBG6 1241 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 SLC2A4RGQ9NR83 387 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 SPATA6Q9NWH7 488 aaPredicted RBP8.61□□□□□ -1.03
LSM5-202ENST00000409292 FNIP2Q9P278 1114 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 RAB23Q9ULC3 237 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 EP300Q09472 2414 aaPredicted RBP8.61□□□□□ -1.03
LSM5-202ENST00000409292 GVINP1Q7Z2Y8 2422 aa8.61□□□□□ -1.03
LSM5-202ENST00000409292 KRBA1A5PL33 1030 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 ARL5CA6NH57 179 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 MEIS3P2A8K0S8 358 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 PRR5-ARHGAP8B1AHC4 643 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 TBX3O15119 743 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 RFPL2O75678 378 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 TDP2O95551 362 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 DCNP07585 359 aaKnown RBP8.6□□□□□ -1.03
LSM5-202ENST00000409292 SP9P0CG40 484 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 RPS6KB1P23443 525 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 YWHABP31946 246 aaKnown RBP8.6□□□□□ -1.03
LSM5-202ENST00000409292 MLH1P40692 756 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 CCT2P78371 535 aaKnown RBP8.6□□□□□ -1.03
LSM5-202ENST00000409292 ARHGAP8P85298 464 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 GRIK3Q13003 919 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 PPP2R5CQ13362 524 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 EMC2Q15006 297 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 EPHA7Q15375 998 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 AMHR2Q16671 573 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 ZNF528Q3MIS6 628 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 PPM1LQ5SGD2 360 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 KIAA0319Q5VV43 1072 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 PLA2G4FQ68DD2 849 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms