RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 MRPL10Q7Z7H8 261 aaKnown RBP22.3■■□□□ 1.16
VSX1-203ENST00000409285 RTN4RL1Q86UN2 441 aaPredicted RBP22.3■■□□□ 1.16
VSX1-203ENST00000409285 IRF2BP1Q8IU81 584 aa22.3■■□□□ 1.16
VSX1-203ENST00000409285 SAAL1Q96ER3 474 aa22.3■■□□□ 1.16
VSX1-203ENST00000409285 IPPQ9Y573 584 aa22.3■■□□□ 1.16
VSX1-203ENST00000409285 ABHD14A-ACY1A0A1B0GW23 586 aa22.29■■□□□ 1.16
VSX1-203ENST00000409285 CLTAP09496 248 aa22.29■■□□□ 1.16
VSX1-203ENST00000409285 ZNF18P17022 549 aa22.29■■□□□ 1.16
VSX1-203ENST00000409285 IKBKEQ14164 716 aa22.29■■□□□ 1.16
VSX1-203ENST00000409285 LUZP1Q86V48 1076 aa22.29■■□□□ 1.16
VSX1-203ENST00000409285 GAS2L3Q86XJ1 694 aa22.29■■□□□ 1.16
VSX1-203ENST00000409285 FAM114A1Q8IWE2 563 aa22.29■■□□□ 1.16
VSX1-203ENST00000409285 HACE1Q8IYU2 909 aa22.29■■□□□ 1.16
VSX1-203ENST00000409285 CEP120Q8N960 986 aa22.29■■□□□ 1.16
VSX1-203ENST00000409285 SMG8Q8ND04 991 aaKnown RBP22.29■■□□□ 1.16
VSX1-203ENST00000409285 FAM213AQ9BRX8 229 aa22.29■■□□□ 1.16
VSX1-203ENST00000409285 NXF3Q9H4D5 531 aaKnown RBP22.29■■□□□ 1.16
VSX1-203ENST00000409285 ZMYND8Q9ULU4 1186 aaPredicted RBP22.29■■□□□ 1.16
VSX1-203ENST00000409285 ZNF233A6NK53 670 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 ADRB2P07550 413 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 EPB41P11171 864 aaKnown RBP22.28■■□□□ 1.16
VSX1-203ENST00000409285 HARSP12081 509 aaKnown RBP22.28■■□□□ 1.16
VSX1-203ENST00000409285 CASP4P49662 377 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 CEP135Q66GS9 1140 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 ZNF598Q86UK7 904 aaKnown RBP22.28■■□□□ 1.16
VSX1-203ENST00000409285 BRSK2Q8IWQ3 736 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 THNSL1Q8IYQ7 743 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 ZSWIM2Q8NEG5 633 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 BORCS6Q96GS4 357 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 MFSD14AQ96MC6 490 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 CCDC94Q9BW85 323 aaPredicted RBP22.28■■□□□ 1.16
VSX1-203ENST00000409285 ELAC1Q9H777 363 aaKnown RBP22.28■■□□□ 1.16
VSX1-203ENST00000409285 FANCLQ9NW38 375 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 RNF216Q9NWF9 866 aaPredicted RBP22.28■■□□□ 1.16
VSX1-203ENST00000409285 ENPP3O14638 875 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 EOMESO95936 686 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 STAG3L1P0CL83 205 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 ACTN1P12814 892 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 ATF7P17544 494 aaPredicted RBP22.28■■□□□ 1.16
VSX1-203ENST00000409285 SYN1P17600 705 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 EEF1GP26641 437 aaKnown RBP22.28■■□□□ 1.16
VSX1-203ENST00000409285 ACOT2P49753 483 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 ZBTB41Q5SVQ8 909 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 PRPF38BQ5VTL8 546 aaKnown RBP22.28■■□□□ 1.16
VSX1-203ENST00000409285 PSRC1Q6PGN9 363 aaPredicted RBP22.28■■□□□ 1.16
VSX1-203ENST00000409285 INTS8Q75QN2 995 aaKnown RBP22.28■■□□□ 1.16
VSX1-203ENST00000409285 FRMD5Q7Z6J6 570 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 ECHDC2Q86YB7 292 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 CBWD2Q8IUF1 395 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 FAM186BQ8IYM0 893 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 CRIPAKQ8N1N5 446 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 EEF2KMTQ96G04 330 aa22.28■■□□□ 1.16
VSX1-203ENST00000409285 METTL14Q9HCE5 456 aaKnown RBP22.28■■□□□ 1.16
VSX1-203ENST00000409285 SAMSN1Q9NSI8 373 aaKnown RBP22.28■■□□□ 1.16
VSX1-203ENST00000409285 RANBP2P49792 3224 aaKnown RBP22.27■■□□□ 1.16
VSX1-203ENST00000409285 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.27■■□□□ 1.16
VSX1-203ENST00000409285 GOLGA8IPA6NC78 632 aa22.27■■□□□ 1.16
VSX1-203ENST00000409285 GOLGA8JA6NMD2 632 aa22.27■■□□□ 1.16
VSX1-203ENST00000409285 TNFSF9P41273 254 aa22.27■■□□□ 1.16
VSX1-203ENST00000409285 ENOX2Q16206 610 aaKnown RBP22.27■■□□□ 1.16
VSX1-203ENST00000409285 C16orf59Q7L2K0 433 aa22.27■■□□□ 1.16
VSX1-203ENST00000409285 PGBD4Q96DM1 585 aa22.27■■□□□ 1.16
VSX1-203ENST00000409285 CNOT6LQ96LI5 555 aaKnown RBP22.27■■□□□ 1.16
VSX1-203ENST00000409285 ACAP3Q96P50 834 aa22.27■■□□□ 1.16
VSX1-203ENST00000409285 LBHD1Q9BQE6 289 aaPredicted RBP22.27■■□□□ 1.16
VSX1-203ENST00000409285 PLEKHA5Q9HAU0 1116 aa22.27■■□□□ 1.16
VSX1-203ENST00000409285 TOPORSQ9NS56 1045 aaPredicted RBP22.27■■□□□ 1.16
VSX1-203ENST00000409285 RBAKQ9NYW8 714 aaPredicted RBP22.27■■□□□ 1.16
VSX1-203ENST00000409285 GOLGA6L19H0YKK7 550 aa22.26■■□□□ 1.15
VSX1-203ENST00000409285 TPM4P67936 248 aa22.26■■□□□ 1.15
VSX1-203ENST00000409285 SPAG1Q07617 926 aa22.26■■□□□ 1.15
VSX1-203ENST00000409285 CYP24A1Q07973 514 aa22.26■■□□□ 1.15
VSX1-203ENST00000409285 CD302Q8IX05 232 aa22.26■■□□□ 1.15
VSX1-203ENST00000409285 RSPH1Q8WYR4 309 aa22.26■■□□□ 1.15
VSX1-203ENST00000409285 UBN1Q9NPG3 1134 aa22.26■■□□□ 1.15
VSX1-203ENST00000409285 TMEM161AQ9NX61 479 aa22.26■■□□□ 1.15
VSX1-203ENST00000409285 SNTG2Q9NY99 539 aa22.26■■□□□ 1.15
VSX1-203ENST00000409285 ARMCX3Q9UH62 379 aaPredicted RBP22.26■■□□□ 1.15
VSX1-203ENST00000409285 HES2Q9Y543 173 aa22.26■■□□□ 1.15
VSX1-203ENST00000409285 COL4A6Q14031 1691 aa22.25■■□□□ 1.15
VSX1-203ENST00000409285 TTC26A0AVF1 554 aa22.25■■□□□ 1.15
VSX1-203ENST00000409285 RBAK-RBAKDNI3L0D1 243 aa22.25■■□□□ 1.15
VSX1-203ENST00000409285 RECQL4O94761 1208 aa22.25■■□□□ 1.15
VSX1-203ENST00000409285 IL18RAPO95256 599 aa22.25■■□□□ 1.15
VSX1-203ENST00000409285 CLDN10P78369 228 aa22.25■■□□□ 1.15
VSX1-203ENST00000409285 PSMD6Q15008 389 aa22.25■■□□□ 1.15
VSX1-203ENST00000409285 SURF1Q15526 300 aa22.25■■□□□ 1.15
VSX1-203ENST00000409285 SEZ6Q53EL9 994 aa22.25■■□□□ 1.15
VSX1-203ENST00000409285 XKR4Q5GH76 650 aa22.25■■□□□ 1.15
VSX1-203ENST00000409285 TCP11X2Q5H9J9 407 aa22.25■■□□□ 1.15
VSX1-203ENST00000409285 USP37Q86T82 979 aa22.25■■□□□ 1.15
VSX1-203ENST00000409285 TMEM192Q8IY95 271 aa22.25■■□□□ 1.15
VSX1-203ENST00000409285 TMC2Q8TDI7 906 aa22.25■■□□□ 1.15
VSX1-203ENST00000409285 TSPAN18Q96SJ8 248 aa22.25■■□□□ 1.15
VSX1-203ENST00000409285 RBSNQ9H1K0 784 aa22.25■■□□□ 1.15
VSX1-203ENST00000409285 RPF1Q9H9Y2 349 aaKnown RBP22.25■■□□□ 1.15
VSX1-203ENST00000409285 GIT1Q9Y2X7 761 aa22.25■■□□□ 1.15
VSX1-203ENST00000409285 GBF1Q92538 1859 aa22.25■■□□□ 1.15
VSX1-203ENST00000409285 KCNJ18B7U540 433 aa22.24■■□□□ 1.15
VSX1-203ENST00000409285 INPPL1O15357 1258 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms