RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 PCDHA12Q9UN75 941 aa10.2□□□□□ -0.78
NIF3L1-203ENST00000409129 SSX2IPQ9Y2D8 614 aa10.2□□□□□ -0.78
NIF3L1-203ENST00000409129 MYH15Q9Y2K3 1946 aa10.2□□□□□ -0.78
NIF3L1-203ENST00000409129 IPPQ9Y573 584 aa10.2□□□□□ -0.78
NIF3L1-203ENST00000409129 ARL5CA6NH57 179 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 INO80B-WBP1J3KQ70 363 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 C2CD2LO14523 706 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 INPPL1O15357 1258 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 EFEMP2O95967 443 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 URODP06132 367 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 ARL2P36404 184 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 OR1G1P47890 313 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 ATXN1P54253 815 aaKnown RBP10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 AK2P54819 239 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 ANAPC15P60006 121 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 KIAA0319Q5VV43 1072 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 C15orf39Q6ZRI6 1047 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 CCDC149Q6ZUS6 474 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 SIX5Q8N196 739 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 CMASQ8NFW8 434 aaPredicted RBP10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 TNFRSF25Q93038 417 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 CPB2Q96IY4 423 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 RPS6KC1Q96S38 1066 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 GAD1Q99259 594 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 HERC2P3Q9BVR0 1158 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 BRMS1Q9HCU9 246 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 MARCH5Q9NX47 278 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 MIOSQ9NXC5 875 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 PRG3Q9Y2Y8 225 aaPredicted RBP10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 HES2Q9Y543 173 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 ZFYVE26Q68DK2 2539 aa10.19□□□□□ -0.78
NIF3L1-203ENST00000409129 ASPMQ8IZT6 3477 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 ANKRD11Q6UB99 2663 aaPredicted RBP10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 DCDC2BA2VCK2 349 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 TEX28O15482 410 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 NARSO43776 548 aaKnown RBP10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 NR1I2O75469 434 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 DGAT1O75907 488 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 ADH1AP07327 375 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 ARF4P18085 180 aaPredicted RBP10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 MLH1P40692 756 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 GLUD2P49448 558 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 SCNN1GP51170 649 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 MBTD1Q05BQ5 628 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 DSC1Q08554 894 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 TDGQ13569 410 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 CAPSQ13938 189 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 CALCRLQ16602 461 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 AMHR2Q16671 573 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 CYP26C1Q6V0L0 522 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 HACE1Q8IYU2 909 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 RNF168Q8IYW5 571 aaPredicted RBP10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 NECAB1Q8N987 351 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 ASAP3Q8TDY4 903 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 RUBCNQ92622 972 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 ZFP42Q96MM3 310 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 COLEC11Q9BWP8 271 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 NFKBIZQ9BYH8 718 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 TRIM6Q9C030 488 aaPredicted RBP10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 TTC12Q9H892 705 aaPredicted RBP10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 RXFP1Q9HBX9 757 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 MAN1C1Q9NR34 630 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 DPP7Q9UHL4 492 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 GIT1Q9Y2X7 761 aa10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 CNOT1A5YKK6 2376 aaKnown RBP10.18□□□□□ -0.78
NIF3L1-203ENST00000409129 A0A087WWV3 80 aa10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 CCDC195A0A1B0GUA6 201 aa10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 BTBD18B2RXH4 712 aa10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 GLUD1P00367 558 aa10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 XRCC6P12956 609 aaKnown RBP eCLIP10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 GLRA2P23416 452 aa10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 AKAP5P24588 427 aa10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 TXKP42681 527 aa10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 RARRES1P49788 294 aa10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 DSG1Q02413 1049 aa10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 ME3Q16798 604 aa10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 SPECC1Q5M775 1068 aa10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 ELMSAN1Q6PJG2 1045 aa10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 PIGOQ8TEQ8 1089 aa10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 HDAC7Q8WUI4 952 aa10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 GTF3C6Q969F1 213 aa10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 CCDC43Q96MW1 224 aaKnown RBP10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 MTMR9Q96QG7 549 aa10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 APOL6Q9BWW8 343 aa10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 RHOBTB2Q9BYZ6 727 aa10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 KCNK12Q9HB15 430 aa10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 CHST7Q9NS84 486 aa10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 FBXL21Q9UKT6 434 aa10.17□□□□□ -0.78
NIF3L1-203ENST00000409129 A0A1B0GUA9 196 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 KRBA1A5PL33 1030 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 F8W810 466 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 WNT7AO00755 349 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 B4GALT5O43286 388 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 NEMFO60524 1076 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 N4BP1O75113 896 aaKnown RBP10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 LARGE1O95461 756 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 NPTXRO95502 500 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 C1RP00736 705 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 DCNP07585 359 aaKnown RBP10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 SPATA31D3P0C874 917 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms