RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 MARCH5Q9NX47 278 aa20.34■□□□□ 0.85
PTPN18-203ENST00000409022 ATG2AQ2TAZ0 1938 aa20.33■□□□□ 0.85
PTPN18-203ENST00000409022 SF3B1O75533 1304 aaKnown RBP eCLIP20.33■□□□□ 0.85
PTPN18-203ENST00000409022 TTLL13PA6NNM8 815 aa20.33■□□□□ 0.85
PTPN18-203ENST00000409022 PDIA4P13667 645 aaKnown RBP20.33■□□□□ 0.85
PTPN18-203ENST00000409022 TXLNAP40222 546 aa20.33■□□□□ 0.85
PTPN18-203ENST00000409022 MTHFRP42898 656 aa20.33■□□□□ 0.85
PTPN18-203ENST00000409022 HSP90AA2PQ14568 343 aaPredicted RBP20.33■□□□□ 0.85
PTPN18-203ENST00000409022 USP41Q3LFD5 358 aa20.33■□□□□ 0.85
PTPN18-203ENST00000409022 ZNF568Q3ZCX4 644 aa20.33■□□□□ 0.85
PTPN18-203ENST00000409022 EEF1DP3Q658K8 133 aa20.33■□□□□ 0.85
PTPN18-203ENST00000409022 KLHL5Q96PQ7 755 aa20.33■□□□□ 0.85
PTPN18-203ENST00000409022 VN1R3Q9BXE9 311 aa20.33■□□□□ 0.85
PTPN18-203ENST00000409022 CCDC39Q9UFE4 941 aa20.33■□□□□ 0.85
PTPN18-203ENST00000409022 ADAM28Q9UKQ2 775 aa20.33■□□□□ 0.85
PTPN18-203ENST00000409022 ODF2LQ9ULJ1 636 aa20.33■□□□□ 0.85
PTPN18-203ENST00000409022 GDAQ9Y2T3 454 aa20.33■□□□□ 0.85
PTPN18-203ENST00000409022 C2CD2LO14523 706 aa20.32■□□□□ 0.84
PTPN18-203ENST00000409022 KRT18P05783 430 aaKnown RBP20.32■□□□□ 0.84
PTPN18-203ENST00000409022 HSP90AA1P07900 732 aaKnown RBP20.32■□□□□ 0.84
PTPN18-203ENST00000409022 MCF2P10911 925 aa20.32■□□□□ 0.84
PTPN18-203ENST00000409022 ABCD1P33897 745 aa20.32■□□□□ 0.84
PTPN18-203ENST00000409022 RAD51AP2Q09MP3 1159 aa20.32■□□□□ 0.84
PTPN18-203ENST00000409022 ELAVL2Q12926 359 aaKnown RBP20.32■□□□□ 0.84
PTPN18-203ENST00000409022 MAPK7Q13164 816 aa20.32■□□□□ 0.84
PTPN18-203ENST00000409022 ATAT1Q5SQI0 421 aa20.32■□□□□ 0.84
PTPN18-203ENST00000409022 FUT10Q6P4F1 479 aa20.32■□□□□ 0.84
PTPN18-203ENST00000409022 HSCBQ8IWL3 235 aa20.32■□□□□ 0.84
PTPN18-203ENST00000409022 RPGRIP1Q96KN7 1286 aa20.32■□□□□ 0.84
PTPN18-203ENST00000409022 ACO2Q99798 780 aaKnown RBP20.32■□□□□ 0.84
PTPN18-203ENST00000409022 APOL5Q9BWW9 433 aa20.32■□□□□ 0.84
PTPN18-203ENST00000409022 SFXN1Q9H9B4 322 aa20.32■□□□□ 0.84
PTPN18-203ENST00000409022 NR2E1Q9Y466 385 aa20.32■□□□□ 0.84
PTPN18-203ENST00000409022 SFI1A8K8P3 1242 aa20.31■□□□□ 0.84
PTPN18-203ENST00000409022 LOC730098B7Z3J9 87 aa20.31■□□□□ 0.84
PTPN18-203ENST00000409022 SLC16A4O15374 487 aa20.31■□□□□ 0.84
PTPN18-203ENST00000409022 GPR37L1O60883 481 aa20.31■□□□□ 0.84
PTPN18-203ENST00000409022 CNPP09543 421 aaKnown RBP20.31■□□□□ 0.84
PTPN18-203ENST00000409022 GRM5P41594 1212 aa20.31■□□□□ 0.84
PTPN18-203ENST00000409022 DSG1Q02413 1049 aa20.31■□□□□ 0.84
PTPN18-203ENST00000409022 GPBP1Q86WP2 473 aa20.31■□□□□ 0.84
PTPN18-203ENST00000409022 RNF168Q8IYW5 571 aaPredicted RBP20.31■□□□□ 0.84
PTPN18-203ENST00000409022 SLC22A17Q8WUG5 538 aa20.31■□□□□ 0.84
PTPN18-203ENST00000409022 SNX21Q969T3 373 aa20.31■□□□□ 0.84
PTPN18-203ENST00000409022 FBXL18Q96ME1 805 aa20.31■□□□□ 0.84
PTPN18-203ENST00000409022 UROC1Q96N76 676 aa20.31■□□□□ 0.84
PTPN18-203ENST00000409022 USP20Q9Y2K6 914 aa20.31■□□□□ 0.84
PTPN18-203ENST00000409022 CASTOR2A6NHX0 329 aa20.3■□□□□ 0.84
PTPN18-203ENST00000409022 STX6O43752 255 aa20.3■□□□□ 0.84
PTPN18-203ENST00000409022 LILRB3O75022 631 aa20.3■□□□□ 0.84
PTPN18-203ENST00000409022 TBCAO75347 108 aaKnown RBP20.3■□□□□ 0.84
PTPN18-203ENST00000409022 FAM13AO94988 1023 aa20.3■□□□□ 0.84
PTPN18-203ENST00000409022 C1RP00736 705 aa20.3■□□□□ 0.84
PTPN18-203ENST00000409022 EPCAMP16422 314 aa20.3■□□□□ 0.84
PTPN18-203ENST00000409022 RESTQ13127 1097 aa20.3■□□□□ 0.84
PTPN18-203ENST00000409022 PDXDC1Q6P996 788 aa20.3■□□□□ 0.84
PTPN18-203ENST00000409022 MPZL3Q6UWV2 235 aa20.3■□□□□ 0.84
PTPN18-203ENST00000409022 ZPBP2Q6X784 338 aa20.3■□□□□ 0.84
PTPN18-203ENST00000409022 RNF135Q8IUD6 432 aa20.3■□□□□ 0.84
PTPN18-203ENST00000409022 TARS2Q9BW92 718 aaKnown RBP20.3■□□□□ 0.84
PTPN18-203ENST00000409022 CCSER1Q9C0I3 900 aa20.3■□□□□ 0.84
PTPN18-203ENST00000409022 CHST7Q9NS84 486 aa20.3■□□□□ 0.84
PTPN18-203ENST00000409022 SLC38A7Q9NVC3 462 aa20.3■□□□□ 0.84
PTPN18-203ENST00000409022 PTGESO14684 152 aa20.29■□□□□ 0.84
PTPN18-203ENST00000409022 TOM1L1O75674 476 aa20.29■□□□□ 0.84
PTPN18-203ENST00000409022 GLUD1P00367 558 aa20.29■□□□□ 0.84
PTPN18-203ENST00000409022 EDN1P05305 212 aa20.29■□□□□ 0.84
PTPN18-203ENST00000409022 PLCG1P19174 1290 aa20.29■□□□□ 0.84
PTPN18-203ENST00000409022 CLCN4P51793 760 aa20.29■□□□□ 0.84
PTPN18-203ENST00000409022 DHX8Q14562 1220 aaKnown RBP20.29■□□□□ 0.84
PTPN18-203ENST00000409022 KARSQ15046 597 aaKnown RBP20.29■□□□□ 0.84
PTPN18-203ENST00000409022 HERC4Q5GLZ8 1057 aaPredicted RBP20.29■□□□□ 0.84
PTPN18-203ENST00000409022 RARS2Q5T160 578 aaKnown RBP20.29■□□□□ 0.84
PTPN18-203ENST00000409022 KIAA0319Q5VV43 1072 aa20.29■□□□□ 0.84
PTPN18-203ENST00000409022 TMEM161BQ8NDZ6 487 aa20.29■□□□□ 0.84
PTPN18-203ENST00000409022 LARP4BQ92615 738 aaKnown RBP20.29■□□□□ 0.84
PTPN18-203ENST00000409022 RAD54LQ92698 747 aa20.29■□□□□ 0.84
PTPN18-203ENST00000409022 KHSRPQ92945 711 aaKnown RBP eCLIP20.29■□□□□ 0.84
PTPN18-203ENST00000409022 BICD1Q96G01 975 aa20.29■□□□□ 0.84
PTPN18-203ENST00000409022 ACAP3Q96P50 834 aa20.29■□□□□ 0.84
PTPN18-203ENST00000409022 CDT1Q9H211 546 aa20.29■□□□□ 0.84
PTPN18-203ENST00000409022 PARVGQ9HBI0 331 aa20.29■□□□□ 0.84
PTPN18-203ENST00000409022 RXFP1Q9HBX9 757 aa20.29■□□□□ 0.84
PTPN18-203ENST00000409022 PTPRHQ9HD43 1115 aa20.29■□□□□ 0.84
PTPN18-203ENST00000409022 FOXD4L1Q9NU39 408 aa20.29■□□□□ 0.84
PTPN18-203ENST00000409022 SRPRBQ9Y5M8 271 aaKnown RBP20.29■□□□□ 0.84
PTPN18-203ENST00000409022 CLIC4Q9Y696 253 aa20.29■□□□□ 0.84
PTPN18-203ENST00000409022 BRD1O95696 1058 aa20.28■□□□□ 0.84
PTPN18-203ENST00000409022 EFEMP2O95967 443 aa20.28■□□□□ 0.84
PTPN18-203ENST00000409022 MAPTP10636 758 aaKnown RBP20.28■□□□□ 0.84
PTPN18-203ENST00000409022 COL9A1P20849 921 aa20.28■□□□□ 0.84
PTPN18-203ENST00000409022 MATR3P43243 847 aaKnown RBP eCLIP20.28■□□□□ 0.84
PTPN18-203ENST00000409022 TAS1R1Q7RTX1 841 aa20.28■□□□□ 0.84
PTPN18-203ENST00000409022 ZBTB33Q86T24 672 aa20.28■□□□□ 0.84
PTPN18-203ENST00000409022 MYCT1Q8N699 235 aa20.28■□□□□ 0.84
PTPN18-203ENST00000409022 HDAC7Q8WUI4 952 aa20.28■□□□□ 0.84
PTPN18-203ENST00000409022 RIN2Q8WYP3 895 aaPredicted RBP20.28■□□□□ 0.84
PTPN18-203ENST00000409022 FNIP2Q9P278 1114 aa20.28■□□□□ 0.84
PTPN18-203ENST00000409022 STK17AQ9UEE5 414 aa20.28■□□□□ 0.84
PTPN18-203ENST00000409022 MTMR6Q9Y217 621 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms