RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 HINFPQ9BQA5 517 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 SH2D3AQ9BRG2 576 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 NIFKQ9BYG3 293 aaKnown RBP6.92□□□□□ -1.3
RPA3-204ENST00000406109 GCOM2Q9BZD3 368 aaPredicted RBP6.92□□□□□ -1.3
RPA3-204ENST00000406109 NT5C3AQ9H0P0 336 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 MINDY3Q9H8M7 445 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 RXFP1Q9HBX9 757 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 DISC1Q9NRI5 854 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 MRPL17Q9NRX2 175 aaKnown RBP6.92□□□□□ -1.3
RPA3-204ENST00000406109 NRBP2Q9NSY0 501 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.92□□□□□ -1.3
RPA3-204ENST00000406109 SMC3Q9UQE7 1217 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 PIN4Q9Y237 131 aaKnown RBP6.92□□□□□ -1.3
RPA3-204ENST00000406109 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.92□□□□□ -1.3
RPA3-204ENST00000406109 PCDHB2Q9Y5E7 798 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 NUMBLQ9Y6R0 609 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 RALGAPA1Q6GYQ0 2036 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 SHISA7A6NL88 538 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 TGM5O43548 720 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 MARCH6O60337 910 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 CCNT1O60563 726 aaKnown RBP6.91□□□□□ -1.3
RPA3-204ENST00000406109 LILRB5O75023 590 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 TDP2O95551 362 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 GLUD1P00367 558 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 ALDH2P05091 517 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 ATP2B1P20020 1258 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 SFPQP23246 707 aaKnown RBP eCLIP6.91□□□□□ -1.3
RPA3-204ENST00000406109 GJB2P29033 226 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 GPC5P78333 572 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 CDC42EP1Q00587 391 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 SETQ01105 290 aaPredicted RBP6.91□□□□□ -1.3
RPA3-204ENST00000406109 DSG1Q02413 1049 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 DSC1Q08554 894 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 FZD5Q13467 585 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 EARS2Q5JPH6 523 aaKnown RBP6.91□□□□□ -1.3
RPA3-204ENST00000406109 PARM1Q6UWI2 310 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 NEK8Q86SG6 692 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 ZNF410Q86VK4 478 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 COLGALT2Q8IYK4 626 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 ZBTB44Q8NCP5 570 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 SMG8Q8ND04 991 aaKnown RBP6.91□□□□□ -1.3
RPA3-204ENST00000406109 FBXO18Q8NFZ0 1043 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 SMG7Q92540 1137 aaKnown RBP6.91□□□□□ -1.3
RPA3-204ENST00000406109 STAMQ92783 540 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 SLC5A5Q92911 643 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 B3GALT6Q96L58 329 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 SCLT1Q96NL6 688 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 TMEM175Q9BSA9 504 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 HERC2P3Q9BVR0 1158 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 UNC45AQ9H3U1 944 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 CHST7Q9NS84 486 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 AGPAT5Q9NUQ2 364 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 MIOSQ9NXC5 875 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 SUCLA2Q9P2R7 463 aaPredicted RBP6.91□□□□□ -1.3
RPA3-204ENST00000406109 STK39Q9UEW8 545 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 DDX25Q9UHL0 483 aaKnown RBP6.91□□□□□ -1.3
RPA3-204ENST00000406109 FAN1Q9Y2M0 1017 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 KIF3AQ9Y496 699 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 SAMM50Q9Y512 469 aa6.91□□□□□ -1.3
RPA3-204ENST00000406109 HELZ2Q9BYK8 2649 aaKnown RBP6.9□□□□□ -1.3
RPA3-204ENST00000406109 TDRD15B5MCY1 1934 aaKnown RBP6.9□□□□□ -1.3
RPA3-204ENST00000406109 CYP3A7-CYP3A51PA0A087WV96 503 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 KANSL1LA0AUZ9 987 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 DCDC2BA2VCK2 349 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 H3BQV1 296 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 GAS2O43903 313 aaKnown RBP6.9□□□□□ -1.3
RPA3-204ENST00000406109 KINO60870 393 aaKnown RBP6.9□□□□□ -1.3
RPA3-204ENST00000406109 MAFO75444 373 aaPredicted RBP6.9□□□□□ -1.3
RPA3-204ENST00000406109 PSMD10O75832 226 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 PPP1R37O75864 691 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 C1RP00736 705 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 POMCP01189 267 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 ADH1AP07327 375 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 SKIP12755 728 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 CYP3A7P24462 503 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 RAB27AP51159 221 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 SNW1Q13573 536 aaKnown RBP6.9□□□□□ -1.3
RPA3-204ENST00000406109 MTERF2Q49AM1 385 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 Q4G0T1 1027 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 LARP1BQ659C4 914 aaKnown RBP6.9□□□□□ -1.3
RPA3-204ENST00000406109 MCTP1Q6DN14 999 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 ANO5Q75V66 913 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 GET4Q7L5D6 327 aaPredicted RBP6.9□□□□□ -1.3
RPA3-204ENST00000406109 CATSPER4Q7RTX7 472 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 PALB2Q86YC2 1186 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 RHPN2Q8IUC4 686 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 HDAC7Q8WUI4 952 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 CLDN23Q96B33 292 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 RIT2Q99578 217 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 NAP1L4Q99733 375 aaKnown RBP6.9□□□□□ -1.3
RPA3-204ENST00000406109 GPR62Q9BZJ7 368 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 PRKD2Q9BZL6 878 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 EPC1Q9H2F5 836 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 PLEKHA4Q9H4M7 779 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 RSAD1Q9HA92 442 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 PARD6AQ9NPB6 346 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 KANSL3Q9P2N6 904 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 TCEAL9Q9UHQ7 104 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 FBXO4Q9UKT5 387 aa6.9□□□□□ -1.3
RPA3-204ENST00000406109 PRG3Q9Y2Y8 225 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms