RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 OGTO15294 1046 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 NOL4O94818 638 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 DARSP14868 501 aaKnown RBP4.02□□□□□ -1.77
RTN4-208ENST00000404909 CST5P28325 142 aaPredicted RBP4.02□□□□□ -1.77
RTN4-208ENST00000404909 ZBED6P86452 979 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 MCL1Q07820 350 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 NFX1Q12986 1120 aaKnown RBP4.02□□□□□ -1.77
RTN4-208ENST00000404909 SNX17Q15036 470 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 KRT39Q6A163 491 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 TRIM65Q6PJ69 517 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 TMEM192Q8IY95 271 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 ARRDC4Q8NCT1 418 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 CCDC112Q8NEF3 446 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 TMEM174Q8WUU8 243 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 KCNN1Q92952 543 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 PRIMPOLQ96LW4 560 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 ADPGKQ9BRR6 497 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 TRIM6Q9C030 488 aaPredicted RBP4.02□□□□□ -1.77
RTN4-208ENST00000404909 TTYH3Q9C0H2 523 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 CDT1Q9H211 546 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 PDZD7Q9H5P4 517 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 PIN4Q9Y237 131 aaKnown RBP4.02□□□□□ -1.77
RTN4-208ENST00000404909 TNFSF13BQ9Y275 285 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 CNTNAP2Q9UHC6 1331 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 A0A1W2PQ45 241 aaPredicted RBP4.02□□□□□ -1.77
RTN4-208ENST00000404909 A0A1W2PQY0 241 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 STX10O60499 249 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 PHACTR2O75167 634 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 CABYRO75952 493 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 STAG3L1P0CL83 205 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 CXCL8P10145 99 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 UCHL3P15374 230 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 TFAMQ00059 246 aaKnown RBP4.02□□□□□ -1.77
RTN4-208ENST00000404909 MTF1Q14872 753 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 FAM187BQ17R55 369 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 KLHDC7AQ5VTJ3 777 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 SV2AQ7L0J3 742 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 IFNLR1Q8IU57 520 aaPredicted RBP4.02□□□□□ -1.77
RTN4-208ENST00000404909 DNAJC5GQ8N7S2 189 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 TAS1R2Q8TE23 839 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 CHP1Q99653 195 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 DESI2Q9BSY9 194 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 APOL6Q9BWW8 343 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 CELF4Q9BZC1 486 aaKnown RBP4.02□□□□□ -1.77
RTN4-208ENST00000404909 INTS2Q9H0H0 1204 aaKnown RBP4.02□□□□□ -1.77
RTN4-208ENST00000404909 TRPV6Q9H1D0 765 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 RPF1Q9H9Y2 349 aaKnown RBP4.02□□□□□ -1.77
RTN4-208ENST00000404909 PTPRHQ9HD43 1115 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 CEP72Q9P209 647 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 FHOD1Q9Y613 1164 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 CDY2AQ9Y6F7 541 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 SCN10AQ9Y5Y9 1956 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 A0A1B0GUA9 196 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 A0A1W2PQJ5 194 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 GTPBP10A4D1E9 387 aaKnown RBP4.02□□□□□ -1.77
RTN4-208ENST00000404909 MOXD2PA6NHM9 499 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 ABLIM1O14639 778 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 ARHGAP6O43182 974 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 N4BP1O75113 896 aaKnown RBP4.02□□□□□ -1.77
RTN4-208ENST00000404909 NPTXRO95502 500 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 PNMA6AP0CW24 399 aaPredicted RBP4.02□□□□□ -1.77
RTN4-208ENST00000404909 CCL5P13501 91 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 PROZP22891 400 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 HOXA11P31270 313 aaPredicted RBP4.02□□□□□ -1.77
RTN4-208ENST00000404909 HOXC8P31273 242 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 CRYBB1P53674 252 aaPredicted RBP4.02□□□□□ -1.77
RTN4-208ENST00000404909 NKX3-2P78367 333 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 MRPS6P82932 125 aaKnown RBP4.02□□□□□ -1.77
RTN4-208ENST00000404909 PSMD6Q15008 389 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 ARHGAP44Q17R89 818 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 TDRD12Q587J7 1177 aaKnown RBP4.02□□□□□ -1.77
RTN4-208ENST00000404909 FIGNQ5HY92 759 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 NOTUMQ6P988 496 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 CYP26C1Q6V0L0 522 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 SERINC5Q86VE9 423 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 NME8Q8N427 588 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 OR5B17Q8NGF7 314 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 KIAA1524Q8TCG1 905 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 TMC2Q8TDI7 906 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 CCDC51Q96ER9 411 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 DNAJC7Q99615 494 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 PI4K2AQ9BTU6 479 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 TMX1Q9H3N1 280 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 TMEM8AQ9HCN3 771 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 RNF19AQ9NV58 838 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 HES2Q9Y543 173 aa4.02□□□□□ -1.77
RTN4-208ENST00000404909 PTPRJQ12913 1337 aa4.01□□□□□ -1.77
RTN4-208ENST00000404909 FAM189A1O60320 539 aa4.01□□□□□ -1.77
RTN4-208ENST00000404909 RPS6KA5O75582 802 aa4.01□□□□□ -1.77
RTN4-208ENST00000404909 PLEKP08567 350 aaPredicted RBP4.01□□□□□ -1.77
RTN4-208ENST00000404909 MCF2P10911 925 aa4.01□□□□□ -1.77
RTN4-208ENST00000404909 USP8P40818 1118 aa4.01□□□□□ -1.77
RTN4-208ENST00000404909 LBX1P52954 281 aa4.01□□□□□ -1.77
RTN4-208ENST00000404909 ATN1P54259 1190 aaPredicted RBP4.01□□□□□ -1.77
RTN4-208ENST00000404909 HSP90AA2PQ14568 343 aaPredicted RBP4.01□□□□□ -1.77
RTN4-208ENST00000404909 SFMBT2Q5VUG0 894 aa4.01□□□□□ -1.77
RTN4-208ENST00000404909 E4F1Q66K89 784 aaPredicted RBP4.01□□□□□ -1.77
RTN4-208ENST00000404909 TWF2Q6IBS0 349 aaKnown RBP4.01□□□□□ -1.77
RTN4-208ENST00000404909 IQCEQ6IPM2 695 aa4.01□□□□□ -1.77
RTN4-208ENST00000404909 TOGARAM2Q6ZUX3 1019 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms