RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 HSP90AA2PQ14568 343 aaPredicted RBP16.93■□□□□ 0.3
TPM1-207ENST00000403994 PTPN21Q16825 1174 aa16.93■□□□□ 0.3
TPM1-207ENST00000403994 NT5DC1Q5TFE4 455 aa16.93■□□□□ 0.3
TPM1-207ENST00000403994 KIAA0319Q5VV43 1072 aa16.93■□□□□ 0.3
TPM1-207ENST00000403994 FUT10Q6P4F1 479 aa16.93■□□□□ 0.3
TPM1-207ENST00000403994 TMC5Q6UXY8 1006 aa16.93■□□□□ 0.3
TPM1-207ENST00000403994 RABGGTAQ92696 567 aa16.93■□□□□ 0.3
TPM1-207ENST00000403994 FAM122AQ96E09 287 aa16.93■□□□□ 0.3
TPM1-207ENST00000403994 PAAF1Q9BRP4 392 aa16.93■□□□□ 0.3
TPM1-207ENST00000403994 COLEC11Q9BWP8 271 aa16.93■□□□□ 0.3
TPM1-207ENST00000403994 GPR62Q9BZJ7 368 aa16.93■□□□□ 0.3
TPM1-207ENST00000403994 CXCL16Q9H2A7 254 aa16.93■□□□□ 0.3
TPM1-207ENST00000403994 MAN1C1Q9NR34 630 aa16.93■□□□□ 0.3
TPM1-207ENST00000403994 SMC3Q9UQE7 1217 aa16.93■□□□□ 0.3
TPM1-207ENST00000403994 SSX2IPQ9Y2D8 614 aa16.93■□□□□ 0.3
TPM1-207ENST00000403994 VWA3AA6NCI4 1184 aa16.92■□□□□ 0.3
TPM1-207ENST00000403994 TMEM221A6NGB7 291 aa16.92■□□□□ 0.3
TPM1-207ENST00000403994 CASTOR2A6NHX0 329 aa16.92■□□□□ 0.3
TPM1-207ENST00000403994 SPDYE4A6NLX3 237 aa16.92■□□□□ 0.3
TPM1-207ENST00000403994 M0R296 226 aa16.92■□□□□ 0.3
TPM1-207ENST00000403994 KIF4AO95239 1232 aa16.92■□□□□ 0.3
TPM1-207ENST00000403994 NPTX2P47972 431 aa16.92■□□□□ 0.3
TPM1-207ENST00000403994 DMP1Q13316 513 aaPredicted RBP16.92■□□□□ 0.3
TPM1-207ENST00000403994 NAB2Q15742 525 aa16.92■□□□□ 0.3
TPM1-207ENST00000403994 HYIQ5T013 277 aa16.92■□□□□ 0.3
TPM1-207ENST00000403994 ATF7IP2Q5U623 682 aa16.92■□□□□ 0.3
TPM1-207ENST00000403994 RINT1Q6NUQ1 792 aa16.92■□□□□ 0.3
TPM1-207ENST00000403994 TRIM67Q6ZTA4 783 aa16.92■□□□□ 0.3
TPM1-207ENST00000403994 DRC1Q96MC2 740 aa16.92■□□□□ 0.3
TPM1-207ENST00000403994 CHST7Q9NS84 486 aa16.92■□□□□ 0.3
TPM1-207ENST00000403994 ARHGAP28Q9P2N2 729 aa16.92■□□□□ 0.3
TPM1-207ENST00000403994 SF3B1O75533 1304 aaKnown RBP eCLIP16.92■□□□□ 0.39e-6■■■■■ 68.9
TPM1-207ENST00000403994 CCDC169A6NNP5 214 aa16.91■□□□□ 0.3
TPM1-207ENST00000403994 GLUD1P00367 558 aa16.91■□□□□ 0.3
TPM1-207ENST00000403994 PEX3P56589 373 aa16.91■□□□□ 0.3
TPM1-207ENST00000403994 ZRSR1Q15695 479 aaKnown RBP16.91■□□□□ 0.3
TPM1-207ENST00000403994 ARL6IP4Q66PJ3 421 aaKnown RBP16.91■□□□□ 0.3
TPM1-207ENST00000403994 C1orf186Q6ZWK4 172 aa16.91■□□□□ 0.3
TPM1-207ENST00000403994 TAS1R3Q7RTX0 852 aa16.91■□□□□ 0.3
TPM1-207ENST00000403994 TDRD5Q8NAT2 981 aaKnown RBP16.91■□□□□ 0.3
TPM1-207ENST00000403994 HASPINQ8TF76 798 aa16.91■□□□□ 0.3
TPM1-207ENST00000403994 PNMA5Q96PV4 448 aa16.91■□□□□ 0.3
TPM1-207ENST00000403994 RXFP1Q9HBX9 757 aa16.91■□□□□ 0.3
TPM1-207ENST00000403994 GDAQ9Y2T3 454 aa16.91■□□□□ 0.3
TPM1-207ENST00000403994 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.91■□□□□ 0.3
TPM1-207ENST00000403994 MYO10Q9HD67 2058 aa16.9■□□□□ 0.3
TPM1-207ENST00000403994 THP07101 528 aa16.9■□□□□ 0.3
TPM1-207ENST00000403994 GUCY2CP25092 1073 aa16.9■□□□□ 0.3
TPM1-207ENST00000403994 SIGLEC14Q08ET2 396 aa16.9■□□□□ 0.3
TPM1-207ENST00000403994 USP41Q3LFD5 358 aa16.9■□□□□ 0.3
TPM1-207ENST00000403994 TMEM119Q4V9L6 283 aa16.9■□□□□ 0.3
TPM1-207ENST00000403994 ATAT1Q5SQI0 421 aa16.9■□□□□ 0.3
TPM1-207ENST00000403994 GPR149Q86SP6 731 aa16.9■□□□□ 0.3
TPM1-207ENST00000403994 ZBTB33Q86T24 672 aa16.9■□□□□ 0.3
TPM1-207ENST00000403994 TIPINQ9BVW5 301 aa16.9■□□□□ 0.3
TPM1-207ENST00000403994 NT5C3AQ9H0P0 336 aa16.9■□□□□ 0.3
TPM1-207ENST00000403994 TNFSF13BQ9Y275 285 aa16.9■□□□□ 0.3
TPM1-207ENST00000403994 DOCK8Q8NF50 2099 aa16.89■□□□□ 0.29
TPM1-207ENST00000403994 K7ERI5 159 aa16.89■□□□□ 0.29
TPM1-207ENST00000403994 CREMQ03060 361 aa16.89■□□□□ 0.29
TPM1-207ENST00000403994 RAD51AP2Q09MP3 1159 aa16.89■□□□□ 0.29
TPM1-207ENST00000403994 ZNF568Q3ZCX4 644 aa16.89■□□□□ 0.29
TPM1-207ENST00000403994 GLRA4Q5JXX5 417 aa16.89■□□□□ 0.29
TPM1-207ENST00000403994 RTP2Q5QGT7 225 aa16.89■□□□□ 0.29
TPM1-207ENST00000403994 LARP1BQ659C4 914 aaKnown RBP16.89■□□□□ 0.29
TPM1-207ENST00000403994 C15orf39Q6ZRI6 1047 aa16.89■□□□□ 0.29
TPM1-207ENST00000403994 CCDC149Q6ZUS6 474 aa16.89■□□□□ 0.29
TPM1-207ENST00000403994 APBB1IPQ7Z5R6 666 aaPredicted RBP16.89■□□□□ 0.29
TPM1-207ENST00000403994 GPR65Q8IYL9 337 aa16.89■□□□□ 0.29
TPM1-207ENST00000403994 CEP120Q8N960 986 aa16.89■□□□□ 0.29
TPM1-207ENST00000403994 CMASQ8NFW8 434 aaPredicted RBP16.89■□□□□ 0.29
TPM1-207ENST00000403994 RIN2Q8WYP3 895 aaPredicted RBP16.89■□□□□ 0.29
TPM1-207ENST00000403994 ASIC4Q96FT7 647 aa16.89■□□□□ 0.29
TPM1-207ENST00000403994 PPP1R10Q96QC0 940 aaKnown RBP16.89■□□□□ 0.29
TPM1-207ENST00000403994 ACO2Q99798 780 aaKnown RBP16.89■□□□□ 0.29
TPM1-207ENST00000403994 MRPL4Q9BYD3 311 aaKnown RBP16.89■□□□□ 0.29
TPM1-207ENST00000403994 CDT1Q9H211 546 aa16.89■□□□□ 0.29
TPM1-207ENST00000403994 KMT5AQ9NQR1 393 aa16.89■□□□□ 0.29
TPM1-207ENST00000403994 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.89■□□□□ 0.29
TPM1-207ENST00000403994 USTQ9Y2C2 406 aa16.89■□□□□ 0.29
TPM1-207ENST00000403994 TADA2AO75478 443 aa16.88■□□□□ 0.29
TPM1-207ENST00000403994 RPL17P18621 184 aaKnown RBP16.88■□□□□ 0.29
TPM1-207ENST00000403994 SLC12A3P55017 1021 aa16.88■□□□□ 0.29
TPM1-207ENST00000403994 MTMR3Q13615 1198 aa16.88■□□□□ 0.29
TPM1-207ENST00000403994 ELMSAN1Q6PJG2 1045 aa16.88■□□□□ 0.29
TPM1-207ENST00000403994 PRSS55Q6UWB4 352 aaPredicted RBP16.88■□□□□ 0.29
TPM1-207ENST00000403994 BRAPQ7Z569 592 aa16.88■□□□□ 0.29
TPM1-207ENST00000403994 BMP8AQ7Z5Y6 402 aa16.88■□□□□ 0.29
TPM1-207ENST00000403994 KREMEN2Q8NCW0 462 aa16.88■□□□□ 0.29
TPM1-207ENST00000403994 CDK5RAP3Q96JB5 506 aa16.88■□□□□ 0.29
TPM1-207ENST00000403994 MFSD14AQ96MC6 490 aa16.88■□□□□ 0.29
TPM1-207ENST00000403994 PLIN2Q99541 437 aa16.88■□□□□ 0.29
TPM1-207ENST00000403994 TMEM134Q9H6X4 195 aa16.88■□□□□ 0.29
TPM1-207ENST00000403994 C17orf75Q9HAS0 396 aa16.88■□□□□ 0.29
TPM1-207ENST00000403994 PTPRHQ9HD43 1115 aa16.88■□□□□ 0.29
TPM1-207ENST00000403994 FNIP2Q9P278 1114 aa16.88■□□□□ 0.29
TPM1-207ENST00000403994 DAXXQ9UER7 740 aaPredicted RBP16.88■□□□□ 0.29
TPM1-207ENST00000403994 SORCS3Q9UPU3 1222 aa16.88■□□□□ 0.29
TPM1-207ENST00000403994 VPS13AQ96RL7 3174 aa16.87■□□□□ 0.29
TPM1-207ENST00000403994 ABLIM1O14639 778 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms