RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 MINDY4Q4G0A6 757 aa6.39□□□□□ -1.39
HMGB3P19-201ENST00000403971 PRAMEF14Q5SWL7 426 aa6.39□□□□□ -1.39
HMGB3P19-201ENST00000403971 TRMT2AQ8IZ69 625 aaKnown RBP6.39□□□□□ -1.39
HMGB3P19-201ENST00000403971 ZGPATQ8N5A5 531 aaKnown RBP6.39□□□□□ -1.39
HMGB3P19-201ENST00000403971 OR5M3Q8NGP4 307 aa6.39□□□□□ -1.39
HMGB3P19-201ENST00000403971 DIS3LQ8TF46 1054 aaKnown RBP6.39□□□□□ -1.39
HMGB3P19-201ENST00000403971 MAP3K14Q99558 947 aa6.39□□□□□ -1.39
HMGB3P19-201ENST00000403971 ENKD1Q9H0I2 346 aa6.39□□□□□ -1.39
HMGB3P19-201ENST00000403971 BCO1Q9HAY6 547 aa6.39□□□□□ -1.39
HMGB3P19-201ENST00000403971 IL23AQ9NPF7 189 aa6.39□□□□□ -1.39
HMGB3P19-201ENST00000403971 DDX20Q9UHI6 824 aaKnown RBP6.39□□□□□ -1.39
HMGB3P19-201ENST00000403971 ZMYM3Q14202 1370 aa6.39□□□□□ -1.39
HMGB3P19-201ENST00000403971 VPS8Q8N3P4 1428 aa6.39□□□□□ -1.39
HMGB3P19-201ENST00000403971 GOLGA6CA6NDK9 693 aa6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 GOLGA6BA6NDN3 693 aa6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 AMY1AP04745 511 aa6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 GOLGA6DP0CG33 693 aa6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 GYPEP15421 78 aa6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 SYN1P17600 705 aa6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 CR2P20023 1033 aa6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 PTPN7P35236 360 aa6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 EPHB4P54760 987 aa6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 TARDBPQ13148 414 aaKnown RBP eCLIP6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 FAM214AQ32MH5 1076 aa6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 PGS1Q32NB8 556 aa6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 GFOD2Q3B7J2 385 aa6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 NOL8Q76FK4 1167 aaKnown RBP6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 TAX1BP1Q86VP1 789 aa6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 SIAH1Q8IUQ4 282 aa6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 PPP1R35Q8TAP8 253 aa6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 RUNDC1Q96C34 613 aa6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 TMEM176AQ96HP8 235 aa6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 ACO2Q99798 780 aaKnown RBP6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 PLA2G12BQ9BX93 195 aa6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 GOLGA6AQ9NYA3 693 aa6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 PPP4R1LQ9P1A2 415 aa6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 AJAP1Q9UKB5 411 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 FMN1Q68DA7 1419 aa6.38□□□□□ -1.39
HMGB3P19-201ENST00000403971 PRG4Q92954 1404 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 ZNF536O15090 1300 aa6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 A0A1W2PRX2 142 aa6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 LRRC14BA6NHZ5 514 aa6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 PRICKLE3O43900 615 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 DTNBO60941 627 aa6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 U2AF1L5P0DN76 240 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 FPR1P21462 350 aa6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 PCSK1P29120 753 aa6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 CRHR1P34998 444 aa6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 U2AF1Q01081 240 aaKnown RBP eCLIP6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 DUSP8Q13202 625 aa6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 TBC1D10BQ4KMP7 808 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 ARHGAP29Q52LW3 1261 aa6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 ZBTB34Q8NCN2 500 aa6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 CEP95Q96GE4 821 aa6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 DMRTA2Q96SC8 542 aa6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 CDC5LQ99459 802 aaKnown RBP6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 SENP6Q9GZR1 1112 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 SEC61A2Q9H9S3 476 aa6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 PARD6AQ9NPB6 346 aa6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 TDP1Q9NUW8 608 aa6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 OBP2AQ9NY56 170 aa6.37□□□□□ -1.39
HMGB3P19-201ENST00000403971 FHOD3Q2V2M9 1422 aa6.36□□□□□ -1.39
HMGB3P19-201ENST00000403971 MYBBP1AQ9BQG0 1328 aaKnown RBP6.36□□□□□ -1.39
HMGB3P19-201ENST00000403971 NRP1O14786 923 aa6.36□□□□□ -1.39
HMGB3P19-201ENST00000403971 GASTP01350 101 aa6.36□□□□□ -1.39
HMGB3P19-201ENST00000403971 ALDH2P05091 517 aa6.36□□□□□ -1.39
HMGB3P19-201ENST00000403971 NPEPPSP55786 919 aa6.36□□□□□ -1.39
HMGB3P19-201ENST00000403971 GRM3Q14832 879 aa6.36□□□□□ -1.39
HMGB3P19-201ENST00000403971 MFSD14BQ5SR56 506 aa6.36□□□□□ -1.39
HMGB3P19-201ENST00000403971 SLFN13Q68D06 897 aa6.36□□□□□ -1.39
HMGB3P19-201ENST00000403971 LIMS2Q7Z4I7 341 aa6.36□□□□□ -1.39
HMGB3P19-201ENST00000403971 DRC7Q8IY82 874 aa6.36□□□□□ -1.39
HMGB3P19-201ENST00000403971 NSUN6Q8TEA1 469 aaKnown RBP6.36□□□□□ -1.39
HMGB3P19-201ENST00000403971 TIFAQ96CG3 184 aa6.36□□□□□ -1.39
HMGB3P19-201ENST00000403971 TMX3Q96JJ7 454 aa6.36□□□□□ -1.39
HMGB3P19-201ENST00000403971 CLPTM1LQ96KA5 538 aa6.36□□□□□ -1.39
HMGB3P19-201ENST00000403971 OR14A2Q96R54 314 aa6.36□□□□□ -1.39
HMGB3P19-201ENST00000403971 MANSC1Q9H8J5 431 aa6.36□□□□□ -1.39
HMGB3P19-201ENST00000403971 LANCL2Q9NS86 450 aa6.36□□□□□ -1.39
HMGB3P19-201ENST00000403971 GABBR1Q9UBS5 961 aa6.36□□□□□ -1.39
HMGB3P19-201ENST00000403971 ACTL7AQ9Y615 435 aa6.36□□□□□ -1.39
HMGB3P19-201ENST00000403971 CFAP20Q9Y6A4 193 aaKnown RBP6.36□□□□□ -1.39
HMGB3P19-201ENST00000403971 MAP3K1Q13233 1512 aa6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 FYCO1Q9BQS8 1478 aa6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 CASKIN1Q8WXD9 1431 aa6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 PMS2P1A4D2B8 440 aa6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 CTNND1O60716 968 aaKnown RBP6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 GUCY1A2P33402 732 aa6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 GZMKP49863 264 aa6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 JAG1P78504 1218 aa6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 CDC42EP1Q00587 391 aa6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 APBA1Q02410 837 aa6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 SURF1Q15526 300 aa6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 UBXN11Q5T124 520 aa6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 CCDC181Q5TID7 509 aa6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 FRMD5Q7Z6J6 570 aa6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 RSPH3Q86UC2 560 aa6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 CAMKK1Q8N5S9 505 aa6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 GIMAP8Q8ND71 665 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 IL17RAQ96F46 866 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms