RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 MYBPC2Q14324 1141 aa36.27■■■■□ 3.4
CSNK1E-204ENST00000403904 CEP135Q66GS9 1140 aa36.27■■■■□ 3.4
CSNK1E-204ENST00000403904 CRELD2Q6UXH1 353 aaPredicted RBP36.27■■■■□ 3.4
CSNK1E-204ENST00000403904 MRPL10Q7Z7H8 261 aaKnown RBP36.27■■■■□ 3.4
CSNK1E-204ENST00000403904 ZNF165P49910 485 aa36.27■■■■□ 3.4
CSNK1E-204ENST00000403904 LRRC55Q6ZSA7 311 aa36.27■■■■□ 3.4
CSNK1E-204ENST00000403904 ZNF598Q86UK7 904 aaKnown RBP36.27■■■■□ 3.4
CSNK1E-204ENST00000403904 TSPY26PQ9H489 355 aa36.27■■■■□ 3.4
CSNK1E-204ENST00000403904 CPSF3Q9UKF6 684 aaKnown RBP36.27■■■■□ 3.4
CSNK1E-204ENST00000403904 RANBP2P49792 3224 aaKnown RBP36.26■■■■□ 3.4
CSNK1E-204ENST00000403904 CETN3O15182 167 aa36.26■■■■□ 3.39
CSNK1E-204ENST00000403904 DEFB103AP81534 67 aa36.26■■■■□ 3.39
CSNK1E-204ENST00000403904 CBWD2Q8IUF1 395 aa36.26■■■■□ 3.39
CSNK1E-204ENST00000403904 ZC3H3Q8IXZ2 948 aaKnown RBP36.26■■■■□ 3.39
CSNK1E-204ENST00000403904 CCDC94Q9BW85 323 aaPredicted RBP36.26■■■■□ 3.39
CSNK1E-204ENST00000403904 SRRTQ9BXP5 876 aaKnown RBP36.26■■■■□ 3.39
CSNK1E-204ENST00000403904 CXXC1Q9P0U4 656 aaPredicted RBP36.26■■■■□ 3.39
CSNK1E-204ENST00000403904 ITGA4P13612 1032 aa36.25■■■■□ 3.39
CSNK1E-204ENST00000403904 HACE1Q8IYU2 909 aa36.25■■■■□ 3.39
CSNK1E-204ENST00000403904 ENOX1Q8TC92 643 aaKnown RBP36.25■■■■□ 3.39
CSNK1E-204ENST00000403904 HERVK_113Q902F9 699 aa36.25■■■■□ 3.39
CSNK1E-204ENST00000403904 FBXL18Q96ME1 805 aa36.25■■■■□ 3.39
CSNK1E-204ENST00000403904 ACAP3Q96P50 834 aa36.25■■■■□ 3.39
CSNK1E-204ENST00000403904 TMEM161AQ9NX61 479 aa36.25■■■■□ 3.39
CSNK1E-204ENST00000403904 PARP2Q9UGN5 583 aa36.25■■■■□ 3.39
CSNK1E-204ENST00000403904 CITO14578 2027 aa36.24■■■■□ 3.39
CSNK1E-204ENST00000403904 AKAP3O75969 853 aa36.24■■■■□ 3.39
CSNK1E-204ENST00000403904 EOMESO95936 686 aa36.24■■■■□ 3.39
CSNK1E-204ENST00000403904 CLTAP09496 248 aa36.24■■■■□ 3.39
CSNK1E-204ENST00000403904 KCNJ6P48051 423 aa36.24■■■■□ 3.39
CSNK1E-204ENST00000403904 SNRNP35Q16560 246 aaKnown RBP36.24■■■■□ 3.39
CSNK1E-204ENST00000403904 KYAT1Q16773 422 aa36.24■■■■□ 3.39
CSNK1E-204ENST00000403904 TPD52L1Q16890 204 aaPredicted RBP36.24■■■■□ 3.39
CSNK1E-204ENST00000403904 PGBD4Q96DM1 585 aa36.24■■■■□ 3.39
CSNK1E-204ENST00000403904 GDF15Q99988 308 aa36.24■■■■□ 3.39
CSNK1E-204ENST00000403904 BPIFA3Q9BQP9 254 aa36.24■■■■□ 3.39
CSNK1E-204ENST00000403904 FRMD4BQ9Y2L6 1034 aa36.24■■■■□ 3.39
CSNK1E-204ENST00000403904 PCDHB7Q9Y5E2 793 aa36.24■■■■□ 3.39
CSNK1E-204ENST00000403904 RECQL4O94761 1208 aa36.23■■■■□ 3.39
CSNK1E-204ENST00000403904 AMHP03971 560 aa36.23■■■■□ 3.39
CSNK1E-204ENST00000403904 SPATA1Q5VX52 437 aa36.23■■■■□ 3.39
CSNK1E-204ENST00000403904 AGMOQ6ZNB7 445 aa36.23■■■■□ 3.39
CSNK1E-204ENST00000403904 CRIPAKQ8N1N5 446 aa36.23■■■■□ 3.39
CSNK1E-204ENST00000403904 ELAC1Q9H777 363 aaKnown RBP36.23■■■■□ 3.39
CSNK1E-204ENST00000403904 KIAA1586Q9HCI6 787 aa36.23■■■■□ 3.39
CSNK1E-204ENST00000403904 LRFN2Q9ULH4 789 aa36.23■■■■□ 3.39
CSNK1E-204ENST00000403904 TRIP11Q15643 1979 aa36.23■■■■□ 3.39
CSNK1E-204ENST00000403904 UPP2O95045 317 aa36.23■■■■□ 3.39
CSNK1E-204ENST00000403904 CXCL8P10145 99 aa36.23■■■■□ 3.39
CSNK1E-204ENST00000403904 ENOX2Q16206 610 aaKnown RBP36.23■■■■□ 3.39
CSNK1E-204ENST00000403904 C9orf50Q5SZB4 431 aa36.23■■■■□ 3.39
CSNK1E-204ENST00000403904 AOPEPQ8N6M6 819 aa36.23■■■■□ 3.39
CSNK1E-204ENST00000403904 KLK14Q9P0G3 267 aa36.23■■■■□ 3.39
CSNK1E-204ENST00000403904 PTPRSQ13332 1948 aa36.22■■■■□ 3.39
CSNK1E-204ENST00000403904 ZNF233A6NK53 670 aa36.22■■■■□ 3.39
CSNK1E-204ENST00000403904 ADRB2P07550 413 aa36.22■■■■□ 3.39
CSNK1E-204ENST00000403904 MYL5Q02045 173 aa36.22■■■■□ 3.39
CSNK1E-204ENST00000403904 TMCO2Q7Z6W1 182 aaPredicted RBP36.22■■■■□ 3.39
CSNK1E-204ENST00000403904 CEP63Q96MT8 703 aa36.22■■■■□ 3.39
CSNK1E-204ENST00000403904 ANP32EQ9BTT0 268 aa36.22■■■■□ 3.39
CSNK1E-204ENST00000403904 UBE2OQ9C0C9 1292 aaKnown RBP36.22■■■■□ 3.39
CSNK1E-204ENST00000403904 RPF1Q9H9Y2 349 aaKnown RBP36.22■■■■□ 3.39
CSNK1E-204ENST00000403904 NFE2L3Q9Y4A8 694 aa36.22■■■■□ 3.39
CSNK1E-204ENST00000403904 TULP1O00294 542 aaPredicted RBP36.21■■■■□ 3.39
CSNK1E-204ENST00000403904 MEFVO15553 781 aaPredicted RBP36.21■■■■□ 3.39
CSNK1E-204ENST00000403904 YARSP54577 528 aaKnown RBP36.21■■■■□ 3.39
CSNK1E-204ENST00000403904 NPAS4Q8IUM7 802 aa36.21■■■■□ 3.39
CSNK1E-204ENST00000403904 TOP1MTQ969P6 601 aa36.21■■■■□ 3.39
CSNK1E-204ENST00000403904 RBAKQ9NYW8 714 aaPredicted RBP36.21■■■■□ 3.39
CSNK1E-204ENST00000403904 CAVIN2O95810 425 aa36.2■■■■□ 3.39
CSNK1E-204ENST00000403904 FGFR1P11362 822 aa36.2■■■■□ 3.39
CSNK1E-204ENST00000403904 PSMC2P35998 433 aaKnown RBP36.2■■■■□ 3.39
CSNK1E-204ENST00000403904 SLC10A6Q3KNW5 377 aa36.2■■■■□ 3.39
CSNK1E-204ENST00000403904 DHX40Q8IX18 779 aaKnown RBP36.2■■■■□ 3.39
CSNK1E-204ENST00000403904 FAM212AQ96EL1 285 aa36.2■■■■□ 3.39
CSNK1E-204ENST00000403904 CXCL16Q9H2A7 254 aa36.2■■■■□ 3.39
CSNK1E-204ENST00000403904 CBX8Q9HC52 389 aa36.2■■■■□ 3.39
CSNK1E-204ENST00000403904 NCAPHQ15003 741 aa36.19■■■■□ 3.38
CSNK1E-204ENST00000403904 SHHQ15465 462 aa36.19■■■■□ 3.38
CSNK1E-204ENST00000403904 FILIP1Q7Z7B0 1213 aa36.19■■■■□ 3.38
CSNK1E-204ENST00000403904 FAM186BQ8IYM0 893 aa36.19■■■■□ 3.38
CSNK1E-204ENST00000403904 RSAD1Q9HA92 442 aa36.19■■■■□ 3.38
CSNK1E-204ENST00000403904 RNF19AQ9NV58 838 aa36.19■■■■□ 3.38
CSNK1E-204ENST00000403904 GIT1Q9Y2X7 761 aa36.19■■■■□ 3.38
CSNK1E-204ENST00000403904 ANK1P16157 1881 aa36.19■■■■□ 3.38
CSNK1E-204ENST00000403904 IQCB1Q15051 598 aa36.19■■■■□ 3.38
CSNK1E-204ENST00000403904 HSP90AA4PQ58FG1 418 aa36.19■■■■□ 3.38
CSNK1E-204ENST00000403904 BRSK2Q8IWQ3 736 aa36.19■■■■□ 3.38
CSNK1E-204ENST00000403904 ZFP42Q96MM3 310 aa36.19■■■■□ 3.38
CSNK1E-204ENST00000403904 MTIF3Q9H2K0 278 aaKnown RBP36.19■■■■□ 3.38
CSNK1E-204ENST00000403904 TOPORSQ9NS56 1045 aaPredicted RBP36.19■■■■□ 3.38
CSNK1E-204ENST00000403904 SAMSN1Q9NSI8 373 aaKnown RBP36.19■■■■□ 3.38
CSNK1E-204ENST00000403904 RNF216Q9NWF9 866 aaPredicted RBP36.19■■■■□ 3.38
CSNK1E-204ENST00000403904 SLC4A7Q9Y6M7 1214 aa36.19■■■■□ 3.38
CSNK1E-204ENST00000403904 FGFR1OPO95684 399 aaKnown RBP36.18■■■■□ 3.38
CSNK1E-204ENST00000403904 MLH1P40692 756 aa36.18■■■■□ 3.38
CSNK1E-204ENST00000403904 WNT7BP56706 349 aa36.18■■■■□ 3.38
CSNK1E-204ENST00000403904 CLLU1OSQ5K130 101 aa36.18■■■■□ 3.38
CSNK1E-204ENST00000403904 FAM117BQ6P1L5 589 aa36.18■■■■□ 3.38
CSNK1E-204ENST00000403904 GAD1Q99259 594 aa36.18■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms