RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 TOPORSQ9NS56 1045 aaPredicted RBP10.13□□□□□ -0.79
CSMD1-202ENST00000400186 MYH13Q9UKX3 1938 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 TTC26A0AVF1 554 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 FAM47DPA6NHR8 397 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 ZNF263O14978 683 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 GSNP06396 782 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 ERFP50548 548 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 TAP1Q03518 808 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 STXBP2Q15833 593 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 CEP78Q5JTW2 689 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 RRM2BQ7LG56 351 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 SPATA4Q8NEY3 305 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 ACAP3Q96P50 834 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 MARCOQ9UEW3 520 aaPredicted RBP10.13□□□□□ -0.79
CSMD1-202ENST00000400186 PCDHGB4Q9UN71 923 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 CCDC78A2IDD5 438 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 ZBTB5O15062 677 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 COPB2P35606 906 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 NLRP11P59045 1033 aaKnown RBP10.13□□□□□ -0.79
CSMD1-202ENST00000400186 STAT4Q14765 748 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 TRPM1Q7Z4N2 1603 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 WDR19Q8NEZ3 1342 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 TOB2Q14106 344 aaPredicted RBP10.13□□□□□ -0.79
CSMD1-202ENST00000400186 MAPK6Q16659 721 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 PFKFB3Q16875 520 aaPredicted RBP10.13□□□□□ -0.79
CSMD1-202ENST00000400186 DNAL1Q4LDG9 190 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 TRAF7Q6Q0C0 670 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 FMR1NBQ8N0W7 255 aaPredicted RBP10.13□□□□□ -0.79
CSMD1-202ENST00000400186 SERPINB3P29508 390 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 VSNL1P62760 191 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 THNSL1Q8IYQ7 743 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 MPP6Q9NZW5 540 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 AFF4Q9UHB7 1163 aaKnown RBP10.13□□□□□ -0.79
CSMD1-202ENST00000400186 AKAP10O43572 662 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 LZTS3O60299 673 aaPredicted RBP10.13□□□□□ -0.79
CSMD1-202ENST00000400186 IMPDH2P12268 514 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 C6orf10Q5SRN2 563 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 SCN4BQ8IWT1 228 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 RMDN3Q96TC7 470 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 FAM213AQ9BRX8 229 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 FAM32AQ9Y421 112 aaKnown RBP10.13□□□□□ -0.79
CSMD1-202ENST00000400186 ADCY3O60266 1144 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 HUS1O60921 280 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 AGTP01019 485 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 MDH1P40925 334 aaKnown RBP10.13□□□□□ -0.79
CSMD1-202ENST00000400186 RUNX1T1Q06455 604 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 CYLC2Q14093 348 aaPredicted RBP10.13□□□□□ -0.79
CSMD1-202ENST00000400186 TRPM8Q7Z2W7 1104 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 SH3KBP1Q96B97 665 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 CCT7Q99832 543 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 EPC1Q9H2F5 836 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 SPDYE5A6NIY4 337 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 CCND1P24385 295 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 SNAP25P60880 206 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 CCDC144BQ3MJ40 725 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 SPDYE7PQ495Y7 208 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 DDX42Q86XP3 938 aaKnown RBP eCLIP10.13□□□□□ -0.79
CSMD1-202ENST00000400186 INPP5DQ92835 1189 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 CMTM5Q96DZ9 223 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 AGBL1Q96MI9 1066 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 ARHGEF40Q8TER5 1519 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 MYO1GB0I1T2 1018 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 NME3Q13232 169 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 PGBD4Q96DM1 585 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 DHX35Q9H5Z1 703 aaKnown RBP10.13□□□□□ -0.79
CSMD1-202ENST00000400186 C10orf88Q9H8K7 445 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 PARVAQ9NVD7 372 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 PITPNM2Q9BZ72 1349 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 SLC16A4O15374 487 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 TWF2Q6IBS0 349 aaKnown RBP10.12□□□□□ -0.79
CSMD1-202ENST00000400186 ZNF556Q9HAH1 456 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 SEC31BQ9NQW1 1179 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 ZC3H7BQ9UGR2 993 aaKnown RBP10.12□□□□□ -0.79
CSMD1-202ENST00000400186 PPP1R37O75864 691 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 PRR29P0C7W0 189 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 TEX2Q8IWB9 1127 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 POLR3FQ9H1D9 316 aaPredicted RBP10.12□□□□□ -0.79
CSMD1-202ENST00000400186 SYTL2Q9HCH5 934 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 BATF3Q9NR55 127 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 AMACRQ9UHK6 382 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 EFCAB6Q5THR3 1501 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 ZFYVE16Q7Z3T8 1539 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 DENND3A2RUS2 1198 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 ORC2Q13416 577 aaPredicted RBP10.12□□□□□ -0.79
CSMD1-202ENST00000400186 DNAJC9Q8WXX5 260 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 ARHGEF1Q92888 912 aaKnown RBP10.12□□□□□ -0.79
CSMD1-202ENST00000400186 TMEM154Q6P9G4 183 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 TTC39CQ8N584 583 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 BEST2Q8NFU1 509 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 MS4A14Q96JA4 679 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 SH3GL2Q99962 352 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 TMEM161AQ9NX61 479 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 PSMC3IPQ9P2W1 217 aaPredicted RBP10.12□□□□□ -0.79
CSMD1-202ENST00000400186 CDYLQ9Y232 598 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 M0R3G1 203 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 ERFEQ4G0M1 354 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 THEMIS2Q5TEJ8 643 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 LRIG3Q6UXM1 1119 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 ANKMY2Q8IV38 441 aa10.12□□□□□ -0.79
CSMD1-202ENST00000400186 ELMOD1Q8N336 334 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms