RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 EIF3DO15371 548 aaKnown RBP eCLIP12.99□□□□□ -0.33
CACNA1C-219ENST00000399649 NCALDP61601 193 aa12.99□□□□□ -0.33
CACNA1C-219ENST00000399649 ANGPT1Q15389 498 aa12.99□□□□□ -0.33
CACNA1C-219ENST00000399649 IZUMO3Q5VZ72 239 aa12.99□□□□□ -0.33
CACNA1C-219ENST00000399649 NUP93Q8N1F7 819 aa12.99□□□□□ -0.33
CACNA1C-219ENST00000399649 SNX31Q8N9S9 440 aa12.99□□□□□ -0.33
CACNA1C-219ENST00000399649 TSPAN17Q96FV3 270 aa12.99□□□□□ -0.33
CACNA1C-219ENST00000399649 ZNF560Q96MR9 790 aa12.99□□□□□ -0.33
CACNA1C-219ENST00000399649 SLC24A3Q9HC58 644 aa12.99□□□□□ -0.33
CACNA1C-219ENST00000399649 AP3M2P53677 418 aa12.99□□□□□ -0.33
CACNA1C-219ENST00000399649 GRAPQ13588 217 aa12.99□□□□□ -0.33
CACNA1C-219ENST00000399649 NCAPHQ15003 741 aa12.99□□□□□ -0.33
CACNA1C-219ENST00000399649 CLEC4FQ8N1N0 589 aa12.99□□□□□ -0.33
CACNA1C-219ENST00000399649 GRAPLQ8TC17 118 aaPredicted RBP12.99□□□□□ -0.33
CACNA1C-219ENST00000399649 LZTS1Q9Y250 596 aa12.99□□□□□ -0.33
CACNA1C-219ENST00000399649 TCOF1Q13428 1488 aaKnown RBP12.99□□□□□ -0.33
CACNA1C-219ENST00000399649 GOLGA8RI6L899 631 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 NT5C2P49902 561 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 TPI1P60174 286 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 TBL3Q12788 808 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 KCNH2Q12809 1159 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 C16orf72Q14CZ0 275 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 PPP1R18Q6NYC8 613 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 CHMP1BQ7LBR1 199 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 GOLGA8TH3BQL2 631 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 CYTH3O43739 400 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 PNMA6AP0CW24 399 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 SNRNP48Q6IEG0 339 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 ENOSF1Q7L5Y1 443 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 NLRP10Q86W26 655 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 GSPT2Q8IYD1 628 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 GPD1LQ8N335 351 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 KIF12Q96FN5 646 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 ETNK1Q9HBU6 452 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 SRP72O76094 671 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 GH2P01242 217 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 FTLP02792 175 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 ENO1P06733 434 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 HSPA9P38646 679 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 HSD17B4P51659 736 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 CACNB2Q08289 660 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 KNOP1Q1ED39 458 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 KIZQ2M2Z5 673 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 MDH1BQ5I0G3 518 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 CCDC137Q6PK04 289 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 C16orf89Q6UX73 402 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 PID1Q7Z2X4 250 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 CYGBQ8WWM9 190 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 CEP95Q96GE4 821 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 OSBPL9Q96SU4 736 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 SPATA16Q9BXB7 569 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 NPHP4O75161 1426 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 PTPRKQ15262 1439 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 LZTS3O60299 673 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 SERPINB4P48594 390 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 LRRC14Q15048 493 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 SH3RF3Q8TEJ3 882 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 C17orf80Q9BSJ5 609 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 HMGB3O15347 200 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 FAM107AO95990 144 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 PGM1P36871 562 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 ARSEP51690 589 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 TADA1Q96BN2 335 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 TMEM245Q9H330 911 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 TAF1DQ9H5J8 278 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 PSD3Q9NYI0 1048 aa12.98□□□□□ -0.33
CACNA1C-219ENST00000399649 ANO9A1A5B4 782 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 AKAP10O43572 662 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 PYGMP11217 842 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 AKT1P31749 480 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 CDH6P55285 790 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 RINLQ6ZS11 566 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 LUZP2Q86TE4 346 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 TNIP2Q8NFZ5 429 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 NSUN6Q8TEA1 469 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 THAP11Q96EK4 314 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 STAMBPL1Q96FJ0 436 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 CLMNQ96JQ2 1002 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 DNAJC7Q99615 494 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 TRIM8Q9BZR9 551 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 DIABLOQ9NR28 239 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 USP17L5A8MUK1 530 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 GYS2P54840 703 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 KCNQ4P56696 695 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 EIF3EP60228 445 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 HPCAP84074 193 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 SWSAP1Q6NVH7 229 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 KDELC2Q7Z4H8 507 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 ZNF513Q8N8E2 541 aaPredicted RBP12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 SPATA33Q96N06 139 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 TRIM49BA6NDI0 452 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 KRT17Q04695 432 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 RUNX1T1Q06455 604 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 BBS7Q8IWZ6 715 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 LSM7Q9UK45 103 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 ASAP1Q9ULH1 1129 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 TMEM94Q12767 1356 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 PEG3Q9GZU2 1588 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms