RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 TSPAN1O60635 241 aa20.12■□□□□ 0.81
UFD1-202ENST00000399523 XYLBO75191 536 aa20.12■□□□□ 0.81
UFD1-202ENST00000399523 C8AP07357 584 aa20.12■□□□□ 0.81
UFD1-202ENST00000399523 RFC5P40937 340 aa20.12■□□□□ 0.81
UFD1-202ENST00000399523 NRLP54845 237 aa20.12■□□□□ 0.81
UFD1-202ENST00000399523 NOTUMQ6P988 496 aa20.12■□□□□ 0.81
UFD1-202ENST00000399523 NPAS3Q8IXF0 933 aa20.12■□□□□ 0.81
UFD1-202ENST00000399523 ZNF687Q8N1G0 1237 aa20.12■□□□□ 0.81
UFD1-202ENST00000399523 CCDC148Q8NFR7 591 aa20.12■□□□□ 0.81
UFD1-202ENST00000399523 ETNPPLQ8TBG4 499 aa20.12■□□□□ 0.81
UFD1-202ENST00000399523 TBCKQ8TEA7 893 aa20.12■□□□□ 0.81
UFD1-202ENST00000399523 CEP170P1Q96L14 293 aa20.12■□□□□ 0.81
UFD1-202ENST00000399523 CSRNP2Q9H175 543 aa20.12■□□□□ 0.81
UFD1-202ENST00000399523 ANO2Q9NQ90 1003 aa20.12■□□□□ 0.81
UFD1-202ENST00000399523 SF3B1O75533 1304 aaKnown RBP eCLIP20.11■□□□□ 0.811e-6■■■■■ 75.7
UFD1-202ENST00000399523 TADA2AO75478 443 aa20.11■□□□□ 0.81
UFD1-202ENST00000399523 ECI2O75521 394 aa20.11■□□□□ 0.81
UFD1-202ENST00000399523 RETP07949 1114 aa20.11■□□□□ 0.81
UFD1-202ENST00000399523 QARSP47897 775 aaKnown RBP20.11■□□□□ 0.81
UFD1-202ENST00000399523 TSGA10IPQ3SY00 556 aa20.11■□□□□ 0.81
UFD1-202ENST00000399523 FERMT3Q86UX7 667 aa20.11■□□□□ 0.81
UFD1-202ENST00000399523 LNX1Q8TBB1 728 aaPredicted RBP20.11■□□□□ 0.81
UFD1-202ENST00000399523 PIK3R5Q8WYR1 880 aa20.11■□□□□ 0.81
UFD1-202ENST00000399523 ZMYM2Q9UBW7 1377 aa20.1■□□□□ 0.81
UFD1-202ENST00000399523 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.1■□□□□ 0.81
UFD1-202ENST00000399523 EML1O00423 815 aa20.1■□□□□ 0.81
UFD1-202ENST00000399523 TDP2O95551 362 aa20.1■□□□□ 0.81
UFD1-202ENST00000399523 PTENP60484 403 aa20.1■□□□□ 0.81
UFD1-202ENST00000399523 GRIK3Q13003 919 aa20.1■□□□□ 0.81
UFD1-202ENST00000399523 UVSSAQ2YD98 709 aa20.1■□□□□ 0.81
UFD1-202ENST00000399523 ADCK5Q3MIX3 580 aa20.1■□□□□ 0.81
UFD1-202ENST00000399523 HACE1Q8IYU2 909 aa20.1■□□□□ 0.81
UFD1-202ENST00000399523 TCP11Q8WWU5 503 aa20.1■□□□□ 0.81
UFD1-202ENST00000399523 RABGGTAQ92696 567 aa20.1■□□□□ 0.81
UFD1-202ENST00000399523 CPB2Q96IY4 423 aa20.1■□□□□ 0.81
UFD1-202ENST00000399523 TTPALQ9BTX7 342 aa20.1■□□□□ 0.81
UFD1-202ENST00000399523 APOL6Q9BWW8 343 aa20.1■□□□□ 0.81
UFD1-202ENST00000399523 CHRDQ9H2X0 955 aa20.1■□□□□ 0.81
UFD1-202ENST00000399523 NXF3Q9H4D5 531 aaKnown RBP20.1■□□□□ 0.81
UFD1-202ENST00000399523 HEBP1Q9NRV9 189 aa20.1■□□□□ 0.81
UFD1-202ENST00000399523 NAP1L2Q9ULW6 460 aaPredicted RBP20.1■□□□□ 0.81
UFD1-202ENST00000399523 POLIQ9UNA4 740 aa20.1■□□□□ 0.81
UFD1-202ENST00000399523 NID2Q14112 1375 aa20.09■□□□□ 0.81
UFD1-202ENST00000399523 DKC1O60832 514 aaKnown RBP eCLIP20.09■□□□□ 0.81
UFD1-202ENST00000399523 NCBP1Q09161 790 aaKnown RBP20.09■□□□□ 0.81
UFD1-202ENST00000399523 HSP90AA2PQ14568 343 aaPredicted RBP20.09■□□□□ 0.81
UFD1-202ENST00000399523 PSMD5Q16401 504 aa20.09■□□□□ 0.81
UFD1-202ENST00000399523 LPAL2Q16609 132 aa20.09■□□□□ 0.81
UFD1-202ENST00000399523 IFNLR1Q8IU57 520 aaPredicted RBP20.09■□□□□ 0.81
UFD1-202ENST00000399523 IER2Q9BTL4 223 aa20.09■□□□□ 0.81
UFD1-202ENST00000399523 C22orf23Q9BZE7 217 aa20.09■□□□□ 0.81
UFD1-202ENST00000399523 PLA2G2FQ9BZM2 168 aa20.09■□□□□ 0.81
UFD1-202ENST00000399523 HCFC1R1Q9NWW0 138 aa20.09■□□□□ 0.81
UFD1-202ENST00000399523 VPS54Q9P1Q0 977 aa20.09■□□□□ 0.81
UFD1-202ENST00000399523 WRAP73Q9P2S5 460 aaPredicted RBP20.09■□□□□ 0.81
UFD1-202ENST00000399523 DNMT3BQ9UBC3 853 aaKnown RBP20.09■□□□□ 0.81
UFD1-202ENST00000399523 FRYQ5TBA9 3013 aa20.08■□□□□ 0.81
UFD1-202ENST00000399523 AKAP5P24588 427 aa20.08■□□□□ 0.81
UFD1-202ENST00000399523 AKAP17AQ02040 695 aaKnown RBP20.08■□□□□ 0.81
UFD1-202ENST00000399523 PPP2R5DQ14738 602 aa20.08■□□□□ 0.81
UFD1-202ENST00000399523 EMC2Q15006 297 aa20.08■□□□□ 0.81
UFD1-202ENST00000399523 NTRK3Q16288 839 aa20.08■□□□□ 0.81
UFD1-202ENST00000399523 PABPC1LQ4VXU2 614 aaKnown RBP20.08■□□□□ 0.81
UFD1-202ENST00000399523 AXDND1Q5T1B0 1012 aaPredicted RBP20.08■□□□□ 0.81
UFD1-202ENST00000399523 MOXD1Q6UVY6 613 aa20.08■□□□□ 0.81
UFD1-202ENST00000399523 RTL10Q7L3V2 364 aa20.08■□□□□ 0.81
UFD1-202ENST00000399523 RASEFQ8IZ41 740 aa20.08■□□□□ 0.81
UFD1-202ENST00000399523 SLC7A14Q8TBB6 771 aa20.08■□□□□ 0.81
UFD1-202ENST00000399523 DNASE1L2Q92874 299 aa20.08■□□□□ 0.81
UFD1-202ENST00000399523 PAAF1Q9BRP4 392 aa20.08■□□□□ 0.81
UFD1-202ENST00000399523 RNF26Q9BY78 433 aaPredicted RBP20.08■□□□□ 0.81
UFD1-202ENST00000399523 TRIM6Q9C030 488 aaPredicted RBP20.08■□□□□ 0.81
UFD1-202ENST00000399523 SH3GLB2Q9NR46 395 aa20.08■□□□□ 0.81
UFD1-202ENST00000399523 SEMA4GQ9NTN9 838 aa20.08■□□□□ 0.81
UFD1-202ENST00000399523 GDE1Q9NZC3 331 aa20.08■□□□□ 0.81
UFD1-202ENST00000399523 SDK1Q7Z5N4 2213 aa20.07■□□□□ 0.8
UFD1-202ENST00000399523 FASNP49327 2511 aaKnown RBP20.07■□□□□ 0.8
UFD1-202ENST00000399523 MAN2B1O00754 1011 aa20.07■□□□□ 0.8
UFD1-202ENST00000399523 ADAM12O43184 909 aa20.07■□□□□ 0.8
UFD1-202ENST00000399523 P4HBP07237 508 aaKnown RBP20.07■□□□□ 0.8
UFD1-202ENST00000399523 ARF4P18085 180 aaPredicted RBP20.07■□□□□ 0.8
UFD1-202ENST00000399523 POU5F1BQ06416 359 aa20.07■□□□□ 0.8
UFD1-202ENST00000399523 PPP2R5CQ13362 524 aa20.07■□□□□ 0.8
UFD1-202ENST00000399523 RAB33AQ14088 237 aa20.07■□□□□ 0.8
UFD1-202ENST00000399523 MXD4Q14582 209 aaPredicted RBP20.07■□□□□ 0.8
UFD1-202ENST00000399523 CSRP2Q16527 193 aa20.07■□□□□ 0.8
UFD1-202ENST00000399523 AMHR2Q16671 573 aa20.07■□□□□ 0.8
UFD1-202ENST00000399523 FAM171A1Q5VUB5 890 aa20.07■□□□□ 0.8
UFD1-202ENST00000399523 PRR23CQ6ZRP0 262 aa20.07■□□□□ 0.8
UFD1-202ENST00000399523 DDX1Q92499 740 aaKnown RBP20.07■□□□□ 0.8
UFD1-202ENST00000399523 BMP2KQ9NSY1 1161 aaPredicted RBP20.07■□□□□ 0.8
UFD1-202ENST00000399523 CACNG4Q9UBN1 327 aa20.07■□□□□ 0.8
UFD1-202ENST00000399523 ANGPTL2Q9UKU9 493 aa20.07■□□□□ 0.8
UFD1-202ENST00000399523 VAV3Q9UKW4 847 aa20.07■□□□□ 0.8
UFD1-202ENST00000399523 VWA8A3KMH1 1905 aa20.07■□□□□ 0.8
UFD1-202ENST00000399523 ZFYVE26Q68DK2 2539 aa20.06■□□□□ 0.8
UFD1-202ENST00000399523 INO80B-WBP1J3KQ70 363 aa20.06■□□□□ 0.8
UFD1-202ENST00000399523 HMGB1P09429 215 aaKnown RBP20.06■□□□□ 0.8
UFD1-202ENST00000399523 TUSC3Q13454 348 aa20.06■□□□□ 0.8
UFD1-202ENST00000399523 PDXDC1Q6P996 788 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms