RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 PPP2R2AP63151 447 aa24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 IFFO1Q0D2I5 559 aa24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 KRT71Q3SY84 523 aa24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 BRDTQ58F21 947 aaPredicted RBP24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 TRMT1LQ7Z2T5 733 aaKnown RBP24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 HOOK3Q86VS8 718 aa24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 NLRP14Q86W24 1093 aa24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 GPD1LQ8N335 351 aa24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 BSNDQ8WZ55 320 aa24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 ATG4CQ96DT6 458 aa24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 KIFC3Q9BVG8 833 aa24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 SLC12A6Q9UHW9 1150 aa24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 KCNG1Q9UIX4 513 aa24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 FAM170AA1A519 330 aa24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 TULP1O00294 542 aaPredicted RBP24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 DGAT1O75907 488 aa24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 NUDT17P0C025 328 aa24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 TBC1D10BQ4KMP7 808 aaPredicted RBP24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 SLC39A4Q6P5W5 647 aa24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 TAS1R2Q8TE23 839 aa24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 C18orf8Q96DM3 657 aa24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 FAM129AQ9BZQ8 928 aa24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 BCCIPQ9P287 314 aaKnown RBP eCLIP24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 GGA2Q9UJY4 613 aa24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 NFASCO94856 1347 aa24.79■■□□□ 1.56
RABGGTA-202ENST00000399409 STBD1O95210 358 aa24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 PMS2P54278 862 aa24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 GCNT1Q02742 428 aa24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 ODF2Q5BJF6 829 aa24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 AADACL2Q6P093 401 aa24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 SLC13A5Q86YT5 568 aaPredicted RBP24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 ZNF473Q8WTR7 871 aaKnown RBP24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 DDX1Q92499 740 aaKnown RBP24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 CDHR1Q96JP9 859 aa24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 PABPC3Q9H361 631 aaKnown RBP24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 AS3MTQ9HBK9 375 aa24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 PDLIM7Q9NR12 457 aa24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 SCAF8Q9UPN6 1271 aaKnown RBP24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 SNX24Q9Y343 169 aa24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 FAM107AO95990 144 aa24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 CPP00450 1065 aa24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 CDR1P51861 262 aa24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 RWDD2BP57060 319 aa24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 ZDHHC24Q6UX98 284 aa24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 SV2AQ7L0J3 742 aa24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 TADA2BQ86TJ2 420 aa24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 NSUN6Q8TEA1 469 aaKnown RBP24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 CCT8L2Q96SF2 557 aa24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 POP1Q99575 1024 aaKnown RBP24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 PLVAPQ9BX97 442 aa24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 KIAA1586Q9HCI6 787 aa24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 MTRF1LQ9UGC7 380 aaKnown RBP24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 NOVA2Q9UNW9 492 aaKnown RBP24.78■■□□□ 1.56
RABGGTA-202ENST00000399409 ATMINO43313 823 aaPredicted RBP24.77■■□□□ 1.56
RABGGTA-202ENST00000399409 ZNF862O60290 1169 aa24.77■■□□□ 1.56
RABGGTA-202ENST00000399409 PYGMP11217 842 aa24.77■■□□□ 1.56
RABGGTA-202ENST00000399409 KCNA2P16389 499 aa24.77■■□□□ 1.56
RABGGTA-202ENST00000399409 PLTPP55058 493 aa24.77■■□□□ 1.56
RABGGTA-202ENST00000399409 BACE1P56817 501 aa24.77■■□□□ 1.56
RABGGTA-202ENST00000399409 CROCCP2Q86T23 111 aa24.77■■□□□ 1.56
RABGGTA-202ENST00000399409 MYCBPAPQ8TBZ2 947 aa24.77■■□□□ 1.56
RABGGTA-202ENST00000399409 IFT74Q96LB3 600 aa24.77■■□□□ 1.56
RABGGTA-202ENST00000399409 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.77■■□□□ 1.56
RABGGTA-202ENST00000399409 ANKRD65E5RJM6 399 aa24.77■■□□□ 1.56
RABGGTA-202ENST00000399409 FNTAP49354 379 aa24.77■■□□□ 1.56
RABGGTA-202ENST00000399409 CLEC16AQ2KHT3 1053 aa24.77■■□□□ 1.56
RABGGTA-202ENST00000399409 DCAF15Q66K64 600 aa24.77■■□□□ 1.56
RABGGTA-202ENST00000399409 CCDC137Q6PK04 289 aaKnown RBP24.77■■□□□ 1.56
RABGGTA-202ENST00000399409 C12orf50Q8NA57 414 aaPredicted RBP24.77■■□□□ 1.56
RABGGTA-202ENST00000399409 MAF1Q9H063 256 aa24.77■■□□□ 1.56
RABGGTA-202ENST00000399409 TAOK3Q9H2K8 898 aa24.77■■□□□ 1.56
RABGGTA-202ENST00000399409 CNOT10Q9H9A5 744 aaKnown RBP24.77■■□□□ 1.56
RABGGTA-202ENST00000399409 TOPORSQ9NS56 1045 aaPredicted RBP24.77■■□□□ 1.56
RABGGTA-202ENST00000399409 GRHL1Q9NZI5 618 aa24.77■■□□□ 1.56
RABGGTA-202ENST00000399409 RIPK3Q9Y572 518 aa24.77■■□□□ 1.56
RABGGTA-202ENST00000399409 PARP14Q460N5 1801 aa24.76■■□□□ 1.55
RABGGTA-202ENST00000399409 REPS2Q8NFH8 660 aa24.76■■□□□ 1.55
RABGGTA-202ENST00000399409 TLCD1Q96CP7 247 aa24.76■■□□□ 1.55
RABGGTA-202ENST00000399409 ATP6V0A4Q9HBG4 840 aa24.76■■□□□ 1.55
RABGGTA-202ENST00000399409 ACP6Q9NPH0 428 aa24.76■■□□□ 1.55
RABGGTA-202ENST00000399409 PIM2Q9P1W9 311 aa24.76■■□□□ 1.55
RABGGTA-202ENST00000399409 HNRNPDLO14979 420 aaKnown RBP24.75■■□□□ 1.55
RABGGTA-202ENST00000399409 STAM2O75886 525 aa24.75■■□□□ 1.55
RABGGTA-202ENST00000399409 PAEPP09466 180 aa24.75■■□□□ 1.55
RABGGTA-202ENST00000399409 COILP38432 576 aaPredicted RBP24.75■■□□□ 1.55
RABGGTA-202ENST00000399409 DENND2CQ68D51 928 aa24.75■■□□□ 1.55
RABGGTA-202ENST00000399409 TTC27Q6P3X3 843 aa24.75■■□□□ 1.55
RABGGTA-202ENST00000399409 PDGFDQ9GZP0 370 aaPredicted RBP24.75■■□□□ 1.55
RABGGTA-202ENST00000399409 GRIN3BO60391 1043 aa24.75■■□□□ 1.55
RABGGTA-202ENST00000399409 KIAA0754O94854 1291 aa24.75■■□□□ 1.55
RABGGTA-202ENST00000399409 SCP2P22307 547 aa24.75■■□□□ 1.55
RABGGTA-202ENST00000399409 SWSAP1Q6NVH7 229 aa24.75■■□□□ 1.55
RABGGTA-202ENST00000399409 ZNF677Q86XU0 584 aa24.75■■□□□ 1.55
RABGGTA-202ENST00000399409 SCYL3Q8IZE3 742 aa24.75■■□□□ 1.55
RABGGTA-202ENST00000399409 TRIM11Q96F44 468 aa24.75■■□□□ 1.55
RABGGTA-202ENST00000399409 JPH1Q9HDC5 661 aaPredicted RBP24.75■■□□□ 1.55
RABGGTA-202ENST00000399409 CNOT8Q9UFF9 292 aaKnown RBP24.75■■□□□ 1.55
RABGGTA-202ENST00000399409 CHORDC1Q9UHD1 332 aaPredicted RBP24.75■■□□□ 1.55
RABGGTA-202ENST00000399409 CNOT7Q9UIV1 285 aaKnown RBP24.75■■□□□ 1.55
RABGGTA-202ENST00000399409 ARID2Q68CP9 1835 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms