RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 SYCP3Q8IZU3 236 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 TRIML1Q8N9V2 468 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 HELQQ8TDG4 1101 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 SAAL1Q96ER3 474 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 ZFP42Q96MM3 310 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 MED15Q96RN5 788 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 TCHPQ9BT92 498 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 MSTO1Q9BUK6 570 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 PBX4Q9BYU1 374 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 TRIM6Q9C030 488 aaPredicted RBP13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 MIOSQ9NXC5 875 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 CPSF3Q9UKF6 684 aaKnown RBP13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 PLAGL2Q9UPG8 496 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 FARP1Q9Y4F1 1045 aaPredicted RBP13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 PCDHB7Q9Y5E2 793 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 CITO14578 2027 aa13.56□□□□□ -0.24
HLA-DQB1-203ENST00000399082 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.55□□□□□ -0.24
HLA-DQB1-203ENST00000399082 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.55□□□□□ -0.24
HLA-DQB1-203ENST00000399082 SOX1O00570 391 aaPredicted RBP13.55□□□□□ -0.24
HLA-DQB1-203ENST00000399082 PTGESO14684 152 aa13.55□□□□□ -0.24
HLA-DQB1-203ENST00000399082 CLIC2O15247 247 aa13.55□□□□□ -0.24
HLA-DQB1-203ENST00000399082 MLH1P40692 756 aa13.55□□□□□ -0.24
HLA-DQB1-203ENST00000399082 OSTNP61366 133 aa13.55□□□□□ -0.24
HLA-DQB1-203ENST00000399082 XKR4Q5GH76 650 aa13.55□□□□□ -0.24
HLA-DQB1-203ENST00000399082 CENPPQ6IPU0 288 aa13.55□□□□□ -0.24
HLA-DQB1-203ENST00000399082 ARMCX5Q6P1M9 558 aa13.55□□□□□ -0.24
HLA-DQB1-203ENST00000399082 POMGNT1Q8WZA1 660 aa13.55□□□□□ -0.24
HLA-DQB1-203ENST00000399082 PGBD4Q96DM1 585 aa13.55□□□□□ -0.24
HLA-DQB1-203ENST00000399082 RAD9AQ99638 391 aa13.55□□□□□ -0.24
HLA-DQB1-203ENST00000399082 PCIF1Q9H4Z3 704 aa13.55□□□□□ -0.24
HLA-DQB1-203ENST00000399082 RSAD1Q9HA92 442 aa13.55□□□□□ -0.24
HLA-DQB1-203ENST00000399082 TYW1Q9NV66 732 aaKnown RBP13.55□□□□□ -0.24
HLA-DQB1-203ENST00000399082 DMAC2Q9NW81 257 aa13.55□□□□□ -0.24
HLA-DQB1-203ENST00000399082 KLK14Q9P0G3 267 aa13.55□□□□□ -0.24
HLA-DQB1-203ENST00000399082 AGO2Q9UKV8 859 aaKnown RBP13.55□□□□□ -0.24
HLA-DQB1-203ENST00000399082 LRFN2Q9ULH4 789 aa13.55□□□□□ -0.24
HLA-DQB1-203ENST00000399082 TRAF3IP3Q9Y228 551 aa13.55□□□□□ -0.24
HLA-DQB1-203ENST00000399082 GOLGA8IPA6NC78 632 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 TRIM49BA6NDI0 452 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 ARL5CA6NH57 179 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 GOLGA8JA6NMD2 632 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 PDXKO00764 312 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 TLL1O43897 1013 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 CXCL8P10145 99 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 PTMSP20962 102 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 ACOT2P49753 483 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 ENOX2Q16206 610 aaKnown RBP13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 SLC10A6Q3KNW5 377 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 DPCR1Q3MIW9 517 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 PAN2Q504Q3 1202 aaKnown RBP13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 SLFN12LQ6IEE8 588 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 ALKAL1Q6UXT8 129 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 CMTR2Q8IYT2 770 aaKnown RBP13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 TMEM130Q8N3G9 435 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 TMEM174Q8WUU8 243 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 SNX27Q96L92 541 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 FBXL18Q96ME1 805 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 ZMAT2Q96NC0 199 aaKnown RBP13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 GAD1Q99259 594 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 TMEM117Q9H0C3 514 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 HSPBP1Q9NZL4 362 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 PARP2Q9UGN5 583 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 GIT1Q9Y2X7 761 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 PCDHA11Q9Y5I1 949 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 CHD7Q9P2D1 2997 aa13.54□□□□□ -0.24
HLA-DQB1-203ENST00000399082 NLRC5Q86WI3 1866 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 TDRD15B5MCY1 1934 aaKnown RBP13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 TTC26A0AVF1 554 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 LINC01553A4QN01 128 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 TBKBP1A7MCY6 615 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 NR3C1P04150 777 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 CA3P07451 260 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 ADRB2P07550 413 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 CLTAP09496 248 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 MATR3P43243 847 aaKnown RBP eCLIP13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 SCNN1GP51170 649 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 NLRP12P59046 1061 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 SNRPFP62306 86 aaKnown RBP13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 SMAD3P84022 425 aaKnown RBP13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 NAB2Q15742 525 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 NFIL3Q16649 462 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 ANKRD40Q6AI12 368 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 TTI2Q6NXR4 508 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 CBWD2Q8IUF1 395 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 SLC9A9Q8IVB4 645 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 ZC3H3Q8IXZ2 948 aaKnown RBP13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 YME1L1Q96TA2 773 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 DUSP9Q99956 384 aaKnown RBP13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 FAM213AQ9BRX8 229 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 ZBED2Q9BTP6 218 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 CCDC94Q9BW85 323 aaPredicted RBP13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 GTPBP4Q9BZE4 634 aaKnown RBP13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 GZF1Q9H116 711 aaPredicted RBP13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 CWH43Q9H720 699 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 TBC1D13Q9NVG8 400 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 INPP5FQ9Y2H2 1132 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 INSL6Q9Y581 213 aa13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 MRPL42Q9Y6G3 142 aaKnown RBP13.53□□□□□ -0.24
HLA-DQB1-203ENST00000399082 HOXA2O43364 376 aa13.52□□□□□ -0.25
HLA-DQB1-203ENST00000399082 EXTL3O43909 919 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms