RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 KCNG1Q9UIX4 513 aa12.16□□□□□ -0.46
RCC1-204ENST00000398958 FRMD4BQ9Y2L6 1034 aa12.16□□□□□ -0.46
RCC1-204ENST00000398958 AFG3L2Q9Y4W6 797 aa12.16□□□□□ -0.46
RCC1-204ENST00000398958 IGSF9BQ9UPX0 1349 aa12.16□□□□□ -0.46
RCC1-204ENST00000398958 CCT8L1PA6NM43 557 aa12.16□□□□□ -0.46
RCC1-204ENST00000398958 DAPK3O43293 454 aa12.16□□□□□ -0.46
RCC1-204ENST00000398958 SKAP2O75563 359 aaPredicted RBP12.16□□□□□ -0.46
RCC1-204ENST00000398958 GHRP10912 638 aa12.16□□□□□ -0.46
RCC1-204ENST00000398958 NAIF1Q69YI7 327 aaPredicted RBP12.16□□□□□ -0.46
RCC1-204ENST00000398958 PHLDB3Q6NSJ2 640 aa12.16□□□□□ -0.46
RCC1-204ENST00000398958 NLRX1Q86UT6 975 aa12.16□□□□□ -0.46
RCC1-204ENST00000398958 TAX1BP1Q86VP1 789 aa12.16□□□□□ -0.46
RCC1-204ENST00000398958 EIF1ADQ8N9N8 165 aaKnown RBP12.16□□□□□ -0.46
RCC1-204ENST00000398958 CCDC197Q8NCU1 140 aa12.16□□□□□ -0.46
RCC1-204ENST00000398958 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.16□□□□□ -0.461e-6■□□□□ 9.3
RCC1-204ENST00000398958 SCFD2Q8WU76 684 aa12.16□□□□□ -0.46
RCC1-204ENST00000398958 TRAPPC12Q8WVT3 735 aa12.16□□□□□ -0.46
RCC1-204ENST00000398958 TCP11Q8WWU5 503 aa12.16□□□□□ -0.46
RCC1-204ENST00000398958 CHMP6Q96FZ7 201 aa12.16□□□□□ -0.46
RCC1-204ENST00000398958 BORCS6Q96GS4 357 aa12.16□□□□□ -0.46
RCC1-204ENST00000398958 AGO4Q9HCK5 861 aaKnown RBP12.16□□□□□ -0.46
RCC1-204ENST00000398958 ADARB2Q9NS39 739 aaKnown RBP12.16□□□□□ -0.46
RCC1-204ENST00000398958 TOPORSQ9NS56 1045 aaPredicted RBP12.16□□□□□ -0.46
RCC1-204ENST00000398958 GINS2Q9Y248 185 aa12.16□□□□□ -0.46
RCC1-204ENST00000398958 FRMPD4Q14CM0 1322 aa12.15□□□□□ -0.46
RCC1-204ENST00000398958 EMSYQ7Z589 1322 aa12.15□□□□□ -0.46
RCC1-204ENST00000398958 TMEM110-MUSTN1A8MSY1 372 aa12.15□□□□□ -0.46
RCC1-204ENST00000398958 RTN2O75298 545 aa12.15□□□□□ -0.46
RCC1-204ENST00000398958 CLTAP09496 248 aa12.15□□□□□ -0.46
RCC1-204ENST00000398958 YWHABP31946 246 aaKnown RBP12.15□□□□□ -0.46
RCC1-204ENST00000398958 DSG3P32926 999 aa12.15□□□□□ -0.46
RCC1-204ENST00000398958 HSD17B4P51659 736 aa12.15□□□□□ -0.46
RCC1-204ENST00000398958 PPP3CAQ08209 521 aa12.15□□□□□ -0.46
RCC1-204ENST00000398958 PHLDB2Q86SQ0 1253 aa12.15□□□□□ -0.46
RCC1-204ENST00000398958 PNMA8AQ86V59 439 aaPredicted RBP12.15□□□□□ -0.46
RCC1-204ENST00000398958 ARHGEF19Q8IW93 802 aa12.15□□□□□ -0.46
RCC1-204ENST00000398958 PLEKHO2Q8TD55 490 aa12.15□□□□□ -0.46
RCC1-204ENST00000398958 LPAR1Q92633 364 aa12.15□□□□□ -0.46
RCC1-204ENST00000398958 STAMBPL1Q96FJ0 436 aa12.15□□□□□ -0.46
RCC1-204ENST00000398958 CEP170P1Q96L14 293 aa12.15□□□□□ -0.46
RCC1-204ENST00000398958 NUCKS1Q9H1E3 243 aaKnown RBP12.15□□□□□ -0.46
RCC1-204ENST00000398958 AS3MTQ9HBK9 375 aa12.15□□□□□ -0.46
RCC1-204ENST00000398958 LRRC4CQ9HCJ2 640 aa12.15□□□□□ -0.46
RCC1-204ENST00000398958 UBE2TQ9NPD8 197 aaPredicted RBP12.15□□□□□ -0.46
RCC1-204ENST00000398958 DOCK5Q9H7D0 1870 aa12.15□□□□□ -0.46
RCC1-204ENST00000398958 SSC5DA1L4H1 1573 aa12.15□□□□□ -0.46
RCC1-204ENST00000398958 FOXN3O00409 490 aaPredicted RBP12.15□□□□□ -0.47
RCC1-204ENST00000398958 ATMINO43313 823 aaPredicted RBP12.15□□□□□ -0.47
RCC1-204ENST00000398958 KIF4AO95239 1232 aa12.15□□□□□ -0.47
RCC1-204ENST00000398958 GAP43P17677 238 aa12.15□□□□□ -0.47
RCC1-204ENST00000398958 RARRES1P49788 294 aa12.15□□□□□ -0.47
RCC1-204ENST00000398958 DHX9Q08211 1270 aaKnown RBP12.15□□□□□ -0.47
RCC1-204ENST00000398958 MYO1EQ12965 1108 aa12.15□□□□□ -0.47
RCC1-204ENST00000398958 BMT2Q1RMZ1 405 aa12.15□□□□□ -0.47
RCC1-204ENST00000398958 FBXO16Q8IX29 292 aaPredicted RBP12.15□□□□□ -0.47
RCC1-204ENST00000398958 CCDC63Q8NA47 563 aa12.15□□□□□ -0.47
RCC1-204ENST00000398958 THOC1Q96FV9 657 aaKnown RBP12.15□□□□□ -0.47
RCC1-204ENST00000398958 XPO6Q96QU8 1125 aaKnown RBP12.15□□□□□ -0.47
RCC1-204ENST00000398958 INTS2Q9H0H0 1204 aaKnown RBP12.15□□□□□ -0.47
RCC1-204ENST00000398958 RRAGCQ9HB90 399 aa12.15□□□□□ -0.47
RCC1-204ENST00000398958 PDGFCQ9NRA1 345 aa12.15□□□□□ -0.47
RCC1-204ENST00000398958 CYP39A1Q9NYL5 469 aa12.15□□□□□ -0.47
RCC1-204ENST00000398958 AMACRQ9UHK6 382 aa12.15□□□□□ -0.47
RCC1-204ENST00000398958 ANKRD63C9JTQ0 380 aa12.14□□□□□ -0.47
RCC1-204ENST00000398958 GALCP54803 685 aa12.14□□□□□ -0.47
RCC1-204ENST00000398958 MYL7Q01449 175 aa12.14□□□□□ -0.47
RCC1-204ENST00000398958 MAP2K1Q02750 393 aaPredicted RBP12.14□□□□□ -0.47
RCC1-204ENST00000398958 PRPF4BQ13523 1007 aaKnown RBP12.14□□□□□ -0.47
RCC1-204ENST00000398958 AADACL2Q6P093 401 aa12.14□□□□□ -0.47
RCC1-204ENST00000398958 CATSPERGQ6ZRH7 1159 aa12.14□□□□□ -0.47
RCC1-204ENST00000398958 DAAM2Q86T65 1068 aa12.14□□□□□ -0.47
RCC1-204ENST00000398958 CCDC60Q8IWA6 550 aaPredicted RBP12.14□□□□□ -0.47
RCC1-204ENST00000398958 NSMCE1Q8WV22 266 aa12.14□□□□□ -0.47
RCC1-204ENST00000398958 PBKQ96KB5 322 aa12.14□□□□□ -0.47
RCC1-204ENST00000398958 PORCNQ9H237 461 aa12.14□□□□□ -0.47
RCC1-204ENST00000398958 DPH5Q9H2P9 285 aa12.14□□□□□ -0.47
RCC1-204ENST00000398958 EHMT1Q9H9B1 1298 aa12.14□□□□□ -0.47
RCC1-204ENST00000398958 KRIT1O00522 736 aa12.14□□□□□ -0.47
RCC1-204ENST00000398958 ZNF862O60290 1169 aa12.14□□□□□ -0.47
RCC1-204ENST00000398958 P4HBP07237 508 aaKnown RBP12.14□□□□□ -0.47
RCC1-204ENST00000398958 ITGA4P13612 1032 aa12.14□□□□□ -0.47
RCC1-204ENST00000398958 ZNF211Q13398 564 aaPredicted RBP12.14□□□□□ -0.47
RCC1-204ENST00000398958 CHADLQ6NUI6 762 aa12.14□□□□□ -0.47
RCC1-204ENST00000398958 TMC3Q7Z5M5 1100 aa12.14□□□□□ -0.47
RCC1-204ENST00000398958 CPNE8Q86YQ8 564 aa12.14□□□□□ -0.47
RCC1-204ENST00000398958 ANKS4BQ8N8V4 417 aa12.14□□□□□ -0.47
RCC1-204ENST00000398958 SYN2Q92777 582 aaPredicted RBP12.14□□□□□ -0.47
RCC1-204ENST00000398958 ARHGEF26Q96DR7 871 aa12.14□□□□□ -0.47
RCC1-204ENST00000398958 TEX13BQ9BXU2 312 aa12.14□□□□□ -0.47
RCC1-204ENST00000398958 ASCC2Q9H1I8 757 aaPredicted RBP12.14□□□□□ -0.47
RCC1-204ENST00000398958 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.14□□□□□ -0.473e-9■■■□□ 16.4
RCC1-204ENST00000398958 PNMA2Q9UL42 364 aa12.14□□□□□ -0.47
RCC1-204ENST00000398958 NOC2LQ9Y3T9 749 aaKnown RBP12.14□□□□□ -0.47
RCC1-204ENST00000398958 MYH11P35749 1972 aa12.13□□□□□ -0.47
RCC1-204ENST00000398958 F8VZ95 297 aa12.13□□□□□ -0.47
RCC1-204ENST00000398958 PGRMC1O00264 195 aaKnown RBP12.13□□□□□ -0.47
RCC1-204ENST00000398958 QARSP47897 775 aaKnown RBP12.13□□□□□ -0.47
RCC1-204ENST00000398958 JAM2P57087 298 aa12.13□□□□□ -0.47
RCC1-204ENST00000398958 OSTNP61366 133 aa12.13□□□□□ -0.47
RCC1-204ENST00000398958 ERMARDQ5T6L9 678 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms