RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 CADM1Q9BY67 442 aaKnown RBP16.02■□□□□ 0.16
CYLD-202ENST00000398568 LRP2BPQ9P2M1 347 aa16.02■□□□□ 0.16
CYLD-202ENST00000398568 STK17AQ9UEE5 414 aa16.02■□□□□ 0.16
CYLD-202ENST00000398568 NUP188Q5SRE5 1749 aa16.02■□□□□ 0.16
CYLD-202ENST00000398568 FAM47DPA6NHR8 397 aa16.02■□□□□ 0.16
CYLD-202ENST00000398568 THAP12O43422 761 aa16.02■□□□□ 0.16
CYLD-202ENST00000398568 SUPT3HO75486 399 aa16.02■□□□□ 0.16
CYLD-202ENST00000398568 KCNH2Q12809 1159 aa16.02■□□□□ 0.16
CYLD-202ENST00000398568 CLEC4GQ6UXB4 293 aa16.02■□□□□ 0.16
CYLD-202ENST00000398568 TRIM59Q8IWR1 403 aa16.02■□□□□ 0.16
CYLD-202ENST00000398568 CRAMP1Q96RY5 1269 aa16.02■□□□□ 0.16
CYLD-202ENST00000398568 OSGEPQ9NPF4 335 aa16.02■□□□□ 0.16
CYLD-202ENST00000398568 SH3GLB2Q9NR46 395 aa16.02■□□□□ 0.16
CYLD-202ENST00000398568 MTUS1Q9ULD2 1270 aa16.02■□□□□ 0.16
CYLD-202ENST00000398568 UMODL1Q5DID0 1318 aa16.02■□□□□ 0.15
CYLD-202ENST00000398568 SYNGAP1Q96PV0 1343 aa16.02■□□□□ 0.15
CYLD-202ENST00000398568 RAD21O60216 631 aa16.02■□□□□ 0.15
CYLD-202ENST00000398568 ABCB4P21439 1286 aa16.02■□□□□ 0.15
CYLD-202ENST00000398568 SPARCL1Q14515 664 aa16.02■□□□□ 0.15
CYLD-202ENST00000398568 CYFIP1Q7L576 1253 aa16.02■□□□□ 0.15
CYLD-202ENST00000398568 ZNF554Q86TJ5 538 aa16.02■□□□□ 0.15
CYLD-202ENST00000398568 UBL4BQ8N7F7 174 aa16.02■□□□□ 0.15
CYLD-202ENST00000398568 RFFLQ8WZ73 363 aa16.02■□□□□ 0.15
CYLD-202ENST00000398568 ART4Q93070 314 aa16.02■□□□□ 0.15
CYLD-202ENST00000398568 LZTS2Q9BRK4 669 aa16.02■□□□□ 0.15
CYLD-202ENST00000398568 SPON1Q9HCB6 807 aa16.02■□□□□ 0.15
CYLD-202ENST00000398568 CHD4Q14839 1912 aa16.02■□□□□ 0.15
CYLD-202ENST00000398568 A6NJR5 290 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 SPATA31D3P0C874 917 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 UCHL3P15374 230 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 EIF4BP23588 611 aaKnown RBP16.01■□□□□ 0.15
CYLD-202ENST00000398568 NEK3P51956 506 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 CCDC92Q53HC0 331 aaPredicted RBP16.01■□□□□ 0.15
CYLD-202ENST00000398568 SEL1L2Q5TEA6 688 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 C6orf163Q5TEZ5 329 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 SPATA31D4Q6ZUB0 917 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 NLRP9Q7RTR0 991 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 FAM163AQ96GL9 167 aaPredicted RBP16.01■□□□□ 0.15
CYLD-202ENST00000398568 TMOD4Q9NZQ9 345 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 NDUFA13Q9P0J0 144 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 PCDHA6Q9UN73 950 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 SH3GLB1Q9Y371 365 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 PCDHA8Q9Y5H6 950 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 UBR3Q6ZT12 1888 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 ZFXP17010 805 aaPredicted RBP16.01■□□□□ 0.15
CYLD-202ENST00000398568 TM4SF1P30408 202 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 ADARP55265 1226 aaKnown RBP16.01■□□□□ 0.15
CYLD-202ENST00000398568 SLC45A4Q5BKX6 768 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 SPDYAQ5MJ70 313 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 DCAF12L1Q5VU92 463 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 FNBP1Q96RU3 617 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 SMC6Q96SB8 1091 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 PCYOX1Q9UHG3 505 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 RASA4BC9J798 803 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 RASA4O43374 803 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 PDE8BO95263 885 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 THOC5Q13769 683 aaKnown RBP16.01■□□□□ 0.15
CYLD-202ENST00000398568 EXOC3L4Q17RC7 722 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 SLC44A4Q53GD3 710 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 PPP2R3CQ969Q6 453 aa16.01■□□□□ 0.15
CYLD-202ENST00000398568 DDX43Q9NXZ2 648 aaKnown RBP16.01■□□□□ 0.15
CYLD-202ENST00000398568 EXOC3O60645 756 aa16■□□□□ 0.15
CYLD-202ENST00000398568 NTSR2O95665 410 aa16■□□□□ 0.15
CYLD-202ENST00000398568 HPCAP84074 193 aa16■□□□□ 0.15
CYLD-202ENST00000398568 CYLC2Q14093 348 aaPredicted RBP16■□□□□ 0.15
CYLD-202ENST00000398568 MTDHQ86UE4 582 aaKnown RBP16■□□□□ 0.15
CYLD-202ENST00000398568 KRT82Q9NSB4 513 aa16■□□□□ 0.15
CYLD-202ENST00000398568 ARPP21Q9UBL0 812 aaPredicted RBP16■□□□□ 0.15
CYLD-202ENST00000398568 CCDC160A6NGH7 325 aa16■□□□□ 0.15
CYLD-202ENST00000398568 GSC2O15499 205 aa16■□□□□ 0.15
CYLD-202ENST00000398568 CDH16O75309 829 aa16■□□□□ 0.15
CYLD-202ENST00000398568 HAUS5O94927 633 aa16■□□□□ 0.15
CYLD-202ENST00000398568 BAG2O95816 211 aa16■□□□□ 0.15
CYLD-202ENST00000398568 PABPC4LP0CB38 370 aaKnown RBP16■□□□□ 0.15
CYLD-202ENST00000398568 TROVE2P10155 538 aaKnown RBP eCLIP16■□□□□ 0.15
CYLD-202ENST00000398568 SLC9A1P19634 815 aa16■□□□□ 0.15
CYLD-202ENST00000398568 CYP7A1P22680 504 aa16■□□□□ 0.15
CYLD-202ENST00000398568 ZBTB16Q05516 673 aa16■□□□□ 0.15
CYLD-202ENST00000398568 MOGSQ13724 837 aa16■□□□□ 0.15
CYLD-202ENST00000398568 FOXR2Q6PJQ5 311 aa16■□□□□ 0.15
CYLD-202ENST00000398568 HEATR3Q7Z4Q2 680 aa16■□□□□ 0.15
CYLD-202ENST00000398568 MIPEPQ99797 713 aa16■□□□□ 0.15
CYLD-202ENST00000398568 SLCO1B3Q9NPD5 702 aa16■□□□□ 0.15
CYLD-202ENST00000398568 BMP2KQ9NSY1 1161 aaPredicted RBP16■□□□□ 0.15
CYLD-202ENST00000398568 SMIM31A0A1B0GVY4 71 aa15.99■□□□□ 0.15
CYLD-202ENST00000398568 PRKCIP41743 596 aa15.99■□□□□ 0.15
CYLD-202ENST00000398568 TXKP42681 527 aa15.99■□□□□ 0.15
CYLD-202ENST00000398568 PRELID2Q8N945 189 aa15.99■□□□□ 0.15
CYLD-202ENST00000398568 DDX12PQ92771 950 aa15.99■□□□□ 0.15
CYLD-202ENST00000398568 UBN1Q9NPG3 1134 aa15.99■□□□□ 0.15
CYLD-202ENST00000398568 CFAP69A5D8W1 941 aa15.99■□□□□ 0.15
CYLD-202ENST00000398568 E2F6O75461 281 aa15.99■□□□□ 0.15
CYLD-202ENST00000398568 KYNUQ16719 465 aa15.99■□□□□ 0.15
CYLD-202ENST00000398568 FAM26FQ5R3K3 315 aa15.99■□□□□ 0.15
CYLD-202ENST00000398568 KBTBD2Q8IY47 623 aa15.99■□□□□ 0.15
CYLD-202ENST00000398568 GLIS3Q8NEA6 775 aa15.99■□□□□ 0.15
CYLD-202ENST00000398568 AGBL1Q96MI9 1066 aa15.99■□□□□ 0.15
CYLD-202ENST00000398568 SEPT11Q9NVA2 429 aaKnown RBP15.99■□□□□ 0.15
CYLD-202ENST00000398568 DNAJC17Q9NVM6 304 aaKnown RBP15.99■□□□□ 0.15
CYLD-202ENST00000398568 NAALADL1Q9UQQ1 740 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms