RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 TCP11X1B4DZS4 312 aa13.21□□□□□ -0.29
SOCS6-201ENST00000397942 GLI1P08151 1106 aa13.21□□□□□ -0.29
SOCS6-201ENST00000397942 RPS6P62753 249 aaKnown RBP13.21□□□□□ -0.29
SOCS6-201ENST00000397942 COG2Q14746 738 aa13.21□□□□□ -0.29
SOCS6-201ENST00000397942 TMEM143Q96AN5 459 aa13.21□□□□□ -0.29
SOCS6-201ENST00000397942 AGBL1Q96MI9 1066 aa13.21□□□□□ -0.29
SOCS6-201ENST00000397942 MTRQ99707 1265 aa13.21□□□□□ -0.29
SOCS6-201ENST00000397942 BLOC1S4Q9NUP1 217 aa13.21□□□□□ -0.29
SOCS6-201ENST00000397942 IP6K2Q9UHH9 426 aa13.21□□□□□ -0.29
SOCS6-201ENST00000397942 NOL3O60936 208 aaKnown RBP13.21□□□□□ -0.29
SOCS6-201ENST00000397942 STAT5BP51692 787 aa13.21□□□□□ -0.29
SOCS6-201ENST00000397942 ATP11CQ8NB49 1132 aa13.21□□□□□ -0.29
SOCS6-201ENST00000397942 TUBB6Q9BUF5 446 aa13.21□□□□□ -0.29
SOCS6-201ENST00000397942 RUSC1Q9BVN2 902 aa13.21□□□□□ -0.29
SOCS6-201ENST00000397942 THAP2Q9H0W7 228 aa13.21□□□□□ -0.29
SOCS6-201ENST00000397942 CCDC68Q9H2F9 335 aa13.21□□□□□ -0.29
SOCS6-201ENST00000397942 KLC4Q9NSK0 619 aa13.21□□□□□ -0.29
SOCS6-201ENST00000397942 INTUQ9ULD6 942 aa13.21□□□□□ -0.29
SOCS6-201ENST00000397942 SPATA31A5Q5VU36 1347 aa13.21□□□□□ -0.3
SOCS6-201ENST00000397942 SPATA31A7Q8IWB4 1347 aa13.21□□□□□ -0.3
SOCS6-201ENST00000397942 KRT3P12035 628 aa13.21□□□□□ -0.3
SOCS6-201ENST00000397942 HSD17B3P37058 310 aa13.21□□□□□ -0.3
SOCS6-201ENST00000397942 PSMC6P62333 389 aa13.21□□□□□ -0.3
SOCS6-201ENST00000397942 GIT2Q14161 759 aa13.21□□□□□ -0.3
SOCS6-201ENST00000397942 STAT4Q14765 748 aa13.21□□□□□ -0.3
SOCS6-201ENST00000397942 ZC3H18Q86VM9 953 aaKnown RBP13.21□□□□□ -0.3
SOCS6-201ENST00000397942 RHPN2Q8IUC4 686 aa13.21□□□□□ -0.3
SOCS6-201ENST00000397942 CYP2W1Q8TAV3 490 aa13.21□□□□□ -0.3
SOCS6-201ENST00000397942 MXRA8Q9BRK3 442 aa13.21□□□□□ -0.3
SOCS6-201ENST00000397942 EIF3DO15371 548 aaKnown RBP eCLIP13.21□□□□□ -0.3
SOCS6-201ENST00000397942 ITIH2P19823 946 aa13.21□□□□□ -0.3
SOCS6-201ENST00000397942 ARMCX2Q7L311 632 aa13.21□□□□□ -0.3
SOCS6-201ENST00000397942 FBXO41Q8TF61 875 aa13.21□□□□□ -0.3
SOCS6-201ENST00000397942 PNMA5Q96PV4 448 aa13.21□□□□□ -0.3
SOCS6-201ENST00000397942 TARS2Q9BW92 718 aaKnown RBP13.21□□□□□ -0.3
SOCS6-201ENST00000397942 TMEM117Q9H0C3 514 aa13.21□□□□□ -0.3
SOCS6-201ENST00000397942 GABPAQ06546 454 aa13.2□□□□□ -0.3
SOCS6-201ENST00000397942 FAM102AQ5T9C2 384 aaPredicted RBP13.2□□□□□ -0.3
SOCS6-201ENST00000397942 MIPOL1Q8TD10 442 aa13.2□□□□□ -0.3
SOCS6-201ENST00000397942 PRMT6Q96LA8 375 aaPredicted RBP13.2□□□□□ -0.3
SOCS6-201ENST00000397942 TRAIPQ9BWF2 469 aa13.2□□□□□ -0.3
SOCS6-201ENST00000397942 SLC26A4O43511 780 aa13.2□□□□□ -0.3
SOCS6-201ENST00000397942 CDH6P55285 790 aa13.2□□□□□ -0.3
SOCS6-201ENST00000397942 ZNF772Q68DY9 489 aaPredicted RBP13.2□□□□□ -0.3
SOCS6-201ENST00000397942 ZNF571Q7Z3V5 609 aaPredicted RBP13.2□□□□□ -0.3
SOCS6-201ENST00000397942 C18orf8Q96DM3 657 aa13.2□□□□□ -0.3
SOCS6-201ENST00000397942 PABPC3Q9H361 631 aaKnown RBP13.2□□□□□ -0.3
SOCS6-201ENST00000397942 RPAP3Q9H6T3 665 aaPredicted RBP13.2□□□□□ -0.3
SOCS6-201ENST00000397942 ASNSD1Q9NWL6 643 aa13.2□□□□□ -0.3
SOCS6-201ENST00000397942 ZNF446Q9NWS9 450 aa13.2□□□□□ -0.3
SOCS6-201ENST00000397942 PREX1Q8TCU6 1659 aa13.2□□□□□ -0.3
SOCS6-201ENST00000397942 PHF2O75151 1096 aa13.2□□□□□ -0.3
SOCS6-201ENST00000397942 CHN1P15882 459 aa13.2□□□□□ -0.3
SOCS6-201ENST00000397942 MOXD1Q6UVY6 613 aa13.2□□□□□ -0.3
SOCS6-201ENST00000397942 KCNK18Q7Z418 384 aa13.2□□□□□ -0.3
SOCS6-201ENST00000397942 SIX6OS1Q8N1H7 587 aa13.2□□□□□ -0.3
SOCS6-201ENST00000397942 HIPK4Q8NE63 616 aa13.2□□□□□ -0.3
SOCS6-201ENST00000397942 CBWD1Q9BRT8 395 aa13.2□□□□□ -0.3
SOCS6-201ENST00000397942 MRPL4Q9BYD3 311 aaKnown RBP13.2□□□□□ -0.3
SOCS6-201ENST00000397942 OSGEPQ9NPF4 335 aa13.2□□□□□ -0.3
SOCS6-201ENST00000397942 ZNRF3Q9ULT6 936 aa13.2□□□□□ -0.3
SOCS6-201ENST00000397942 WDR46O15213 610 aaKnown RBP13.2□□□□□ -0.3
SOCS6-201ENST00000397942 LONRF1Q17RB8 773 aa13.2□□□□□ -0.3
SOCS6-201ENST00000397942 LRIG3Q6UXM1 1119 aa13.2□□□□□ -0.3
SOCS6-201ENST00000397942 TRMT10CQ7L0Y3 403 aaKnown RBP13.2□□□□□ -0.3
SOCS6-201ENST00000397942 CFAP36Q96G28 342 aa13.2□□□□□ -0.3
SOCS6-201ENST00000397942 PARVAQ9NVD7 372 aa13.2□□□□□ -0.3
SOCS6-201ENST00000397942 PPLO60437 1756 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 SLC1A1P43005 524 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 MAPK7Q13164 816 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 MMEL1Q495T6 779 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 FAM118BQ9BPY3 351 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 PI4K2AQ9BTU6 479 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 TMEM39BQ9GZU3 492 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 SENP1Q9P0U3 644 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 GYS1P13807 737 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 ATG16L1Q676U5 607 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 BZW1Q7L1Q6 419 aaKnown RBP13.19□□□□□ -0.3
SOCS6-201ENST00000397942 CRLF3Q8IUI8 442 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 MDM1Q8TC05 714 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 ARHGEF28Q8N1W1 1705 aaKnown RBP13.19□□□□□ -0.3
SOCS6-201ENST00000397942 RP1L1Q8IWN7 2480 aaPredicted RBP13.19□□□□□ -0.3
SOCS6-201ENST00000397942 SPAG7O75391 227 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 CORO7P57737 925 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 NCOA4Q13772 614 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 HIF1AQ16665 826 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 SLC13A5Q86YT5 568 aaPredicted RBP13.19□□□□□ -0.3
SOCS6-201ENST00000397942 CASKIN2Q8WXE0 1202 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 TOPORSQ9NS56 1045 aaPredicted RBP13.19□□□□□ -0.3
SOCS6-201ENST00000397942 KLHL11Q9NVR0 708 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 MYO9BQ13459 2157 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 DDTLA6NHG4 134 aaPredicted RBP13.19□□□□□ -0.3
SOCS6-201ENST00000397942 P4HA2O15460 535 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 ATP5HO75947 161 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 SREBF1P36956 1147 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 CBWD2Q8IUF1 395 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 MYCBPAPQ8TBZ2 947 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 CYFIP2Q96F07 1278 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 TIPINQ9BVW5 301 aa13.19□□□□□ -0.3
SOCS6-201ENST00000397942 A0A0U1RQJ8 604 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms