RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 PPP2R5EQ16537 467 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 PPP1R15BQ5SWA1 713 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 TRIM68Q6AZZ1 485 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 ZNF746Q6NUN9 644 aaPredicted RBP17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 TRIM74Q86UV6 250 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 TRIM73Q86UV7 250 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 FAM178BQ8IXR5 827 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 EPS8L3Q8TE67 593 aaKnown RBP17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 GRHL1Q9NZI5 618 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 STK38LQ9Y2H1 464 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 STK24Q9Y6E0 443 aa17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 TNS1Q9HBL0 1735 aaKnown RBP17.12■□□□□ 0.33
CHMP1A-201ENST00000397901 DDTLA6NHG4 134 aaPredicted RBP17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 PHF2O75151 1096 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 COQ9O75208 318 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 SLITRK3O94933 977 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 FOSP01100 380 aaPredicted RBP17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 GBP1P32455 592 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 PTGIRP43119 386 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 FKBP1AP62942 108 aaKnown RBP17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 CUL3Q13618 768 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 NUGGCQ68CJ6 796 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 STYK1Q6J9G0 422 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 PRELID2Q8N945 189 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 FAM81AQ8TBF8 368 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 MKL1Q969V6 931 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 AGPAT1Q99943 283 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 MTFR1LQ9H019 292 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 CCDC113Q9H0I3 377 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.11■□□□□ 0.332e-6■■■■■ 131.4
CHMP1A-201ENST00000397901 INTS9Q9NV88 658 aaKnown RBP17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 NYAP2Q9P242 653 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 C2CD2Q9Y426 696 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 SPDYE5A6NIY4 337 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 CCDC169A6NNP5 214 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 E7ENQ6 273 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 SNX3O60493 162 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 EXOC3O60645 756 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 NDUFB10O96000 172 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 CIITAP33076 1130 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 IFNAR2P48551 515 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 UBXN2AP68543 259 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 DACT2Q5SW24 774 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 STRIP1Q5VSL9 837 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 SYDE2Q5VT97 1194 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 ARMC3Q5W041 872 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 TTC27Q6P3X3 843 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 ZDHHC14Q8IZN3 488 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 KCNV2Q8TDN2 545 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 BICD1Q96G01 975 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 PRMT1Q99873 361 aaKnown RBP17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 HSD17B14Q9BPX1 270 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 WDR18Q9BV38 432 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 TRIM4Q9C037 500 aa17.11■□□□□ 0.33
CHMP1A-201ENST00000397901 FTLP02792 175 aaPredicted RBP17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 ODR4Q5SWX8 454 aa17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 ZNF720Q7Z2F6 126 aa17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 APBB1IPQ7Z5R6 666 aaPredicted RBP17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 PGM2Q96G03 612 aa17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 FIZ1Q96SL8 496 aa17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 MKNK1Q9BUB5 465 aa17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 UBE2TQ9NPD8 197 aaPredicted RBP17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 PTPN22Q9Y2R2 807 aa17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 EIF4E1BA6NMX2 242 aaKnown RBP17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 ATMINO43313 823 aaPredicted RBP17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 UPP2O95045 317 aa17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 OAS1P00973 400 aaKnown RBP17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 GNAZP19086 355 aa17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 PCK1P35558 622 aa17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 RANBP1P43487 201 aa17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 PDE6CP51160 858 aa17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 MESDQ14696 234 aa17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 ASRGL1Q7L266 308 aa17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 SDCCAG8Q86SQ7 713 aaPredicted RBP17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 KIAA0825Q8IV33 1275 aa17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 SYCP3Q8IZU3 236 aa17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 KIF2BQ8N4N8 673 aa17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 UBL4BQ8N7F7 174 aa17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 LMCD1Q9NZU5 365 aa17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 USP15Q9Y4E8 981 aaPredicted RBP17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 SYNGAP1Q96PV0 1343 aa17.1■□□□□ 0.33
CHMP1A-201ENST00000397901 IGLV3-22A0A075B6J6 115 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 TCRBV7S2A1N4TA0A589 114 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 H0YIN7 160 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 ECE2O60344 883 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 ATP6V1C1P21283 382 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 DLG4P78352 724 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 KIF22Q14807 665 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 LLGL1Q15334 1064 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 SLC15A2Q16348 729 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 OTOP1Q7RTM1 612 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 CPNE8Q86YQ8 564 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 FBF1Q8TES7 1133 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 DTNBP1Q96EV8 351 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 RBM41Q96IZ5 413 aaKnown RBP17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 RGPD3A6NKT7 1758 aaPredicted RBP17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 RGPD4Q7Z3J3 1758 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 ANKRD63C9JTQ0 380 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 CHRNA3P32297 505 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 BFSP1Q12934 665 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms