RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 EIF3CLB5ME19 914 aaKnown RBP16.42■□□□□ 0.22
LSS-202ENST00000397728 GHRP10912 638 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 GUCY2DQ02846 1103 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 DCAF4L1Q3SXM0 396 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 TATDN1Q6P1N9 297 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 RUFY4Q6ZNE9 571 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 GDAP1Q8TB36 358 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 P3H4Q92791 437 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 HVCN1Q96D96 273 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 EIF3CQ99613 913 aaKnown RBP16.42■□□□□ 0.22
LSS-202ENST00000397728 BPIFA3Q9BQP9 254 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 ZC3H11AO75152 810 aaKnown RBP eCLIP16.42■□□□□ 0.222e-7■■■□□ 15.4
LSS-202ENST00000397728 MTMR3Q13615 1198 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 BBOF1Q8ND07 529 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 NCAPGQ9BPX3 1015 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 OGTO15294 1046 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 USP2O75604 605 aaPredicted RBP16.42■□□□□ 0.22
LSS-202ENST00000397728 ZRANB2O95218 330 aaKnown RBP eCLIP16.42■□□□□ 0.221e-6■□□□□ 10.2
LSS-202ENST00000397728 VIMP08670 466 aaKnown RBP16.42■□□□□ 0.22
LSS-202ENST00000397728 WEE2P0C1S8 567 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 FLT3LGP49771 235 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 FMR1Q06787 632 aaKnown RBP eCLIP16.42■□□□□ 0.22
LSS-202ENST00000397728 ARID5BQ14865 1188 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 HHATQ5VTY9 493 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 COPS5Q92905 334 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 BUB1BO60566 1050 aaPredicted RBP16.41■□□□□ 0.22
LSS-202ENST00000397728 NOP14P78316 857 aaKnown RBP16.41■□□□□ 0.22
LSS-202ENST00000397728 PTPAQ15257 358 aa16.41■□□□□ 0.22
LSS-202ENST00000397728 FAM76AQ8TAV0 307 aa16.41■□□□□ 0.22
LSS-202ENST00000397728 HPDLQ96IR7 371 aa16.41■□□□□ 0.22
LSS-202ENST00000397728 UBQLN1Q9UMX0 589 aaKnown RBP16.41■□□□□ 0.22
LSS-202ENST00000397728 HEY1Q9Y5J3 304 aa16.41■□□□□ 0.22
LSS-202ENST00000397728 BTBD19C9JJ37 291 aa16.41■□□□□ 0.22
LSS-202ENST00000397728 ITGB3P05106 788 aa16.41■□□□□ 0.22
LSS-202ENST00000397728 SOX5P35711 763 aa16.41■□□□□ 0.22
LSS-202ENST00000397728 NNMTP40261 264 aa16.41■□□□□ 0.22
LSS-202ENST00000397728 EFCAB13Q8IY85 973 aa16.41■□□□□ 0.22
LSS-202ENST00000397728 FBF1Q8TES7 1133 aa16.41■□□□□ 0.22
LSS-202ENST00000397728 CPB2Q96IY4 423 aa16.41■□□□□ 0.22
LSS-202ENST00000397728 AGPAT3Q9NRZ7 376 aa16.41■□□□□ 0.22
LSS-202ENST00000397728 PARP4Q9UKK3 1724 aaKnown RBP16.41■□□□□ 0.22
LSS-202ENST00000397728 SART1O43290 800 aaKnown RBP16.41■□□□□ 0.22
LSS-202ENST00000397728 RPLP2P05387 115 aaKnown RBP16.41■□□□□ 0.22
LSS-202ENST00000397728 PRKAR2AP13861 404 aaKnown RBP16.41■□□□□ 0.22
LSS-202ENST00000397728 PSEN2P49810 448 aa16.41■□□□□ 0.22
LSS-202ENST00000397728 TRIP13Q15645 432 aaPredicted RBP16.41■□□□□ 0.22
LSS-202ENST00000397728 CCDC144BQ3MJ40 725 aa16.41■□□□□ 0.22
LSS-202ENST00000397728 CROCCP2Q86T23 111 aa16.41■□□□□ 0.22
LSS-202ENST00000397728 DCP1BQ8IZD4 617 aaKnown RBP16.41■□□□□ 0.22
LSS-202ENST00000397728 COLEC11Q9BWP8 271 aa16.41■□□□□ 0.22
LSS-202ENST00000397728 HPCAL4Q9UM19 191 aa16.41■□□□□ 0.22
LSS-202ENST00000397728 JRKLQ9Y4A0 524 aa16.41■□□□□ 0.22
LSS-202ENST00000397728 DAAM1Q9Y4D1 1078 aa16.41■□□□□ 0.22
LSS-202ENST00000397728 PEAK1Q9H792 1746 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 TAF6P49848 677 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 C6orf163Q5TEZ5 329 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 PDCD6IPQ8WUM4 868 aaKnown RBP16.4■□□□□ 0.22
LSS-202ENST00000397728 PI4K2AQ9BTU6 479 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 HEMGNQ9BXL5 484 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 APEX2Q9UBZ4 518 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 MSCO60682 206 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 CTNNA1P35221 906 aaKnown RBP16.4■□□□□ 0.22
LSS-202ENST00000397728 SEPT6Q14141 434 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 TAF2Q6P1X5 1199 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 TRIM72Q6ZMU5 477 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 BZW1Q7L1Q6 419 aaKnown RBP16.4■□□□□ 0.22
LSS-202ENST00000397728 VSIG10LQ86VR7 867 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 PPP1R13LQ8WUF5 828 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 ECEL1O95672 775 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 MUTP22033 750 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 UBA1P22314 1058 aaKnown RBP16.4■□□□□ 0.22
LSS-202ENST00000397728 RBBP8NLQ8NC74 664 aaPredicted RBP16.4■□□□□ 0.22
LSS-202ENST00000397728 CDKL2Q92772 493 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 SMC6Q96SB8 1091 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 NUP85Q9BW27 656 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 NT5C1AQ9BXI3 368 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 CDC23Q9UJX2 597 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 ANKRD26Q9UPS8 1709 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 TMEM150BA6NC51 233 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 TOM1L1O75674 476 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 CDK17Q00537 523 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 LAMTOR4Q0VGL1 99 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 EARS2Q5JPH6 523 aaKnown RBP16.4■□□□□ 0.22
LSS-202ENST00000397728 SARM1Q6SZW1 724 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 DLK2Q6UY11 383 aa16.4■□□□□ 0.22
LSS-202ENST00000397728 ZNF564Q8TBZ8 553 aaPredicted RBP16.4■□□□□ 0.22
LSS-202ENST00000397728 PSMC6P62333 389 aa16.39■□□□□ 0.21
LSS-202ENST00000397728 MAP7D1Q3KQU3 841 aa16.39■□□□□ 0.21
LSS-202ENST00000397728 ACCSLQ4AC99 568 aa16.39■□□□□ 0.21
LSS-202ENST00000397728 PLCD4Q9BRC7 762 aa16.39■□□□□ 0.21
LSS-202ENST00000397728 CALCOCO1Q9P1Z2 691 aa16.39■□□□□ 0.21
LSS-202ENST00000397728 NEMP1O14524 444 aa16.39■□□□□ 0.21
LSS-202ENST00000397728 HOXA2O43364 376 aa16.39■□□□□ 0.21
LSS-202ENST00000397728 TFDP2Q14188 446 aa16.39■□□□□ 0.21
LSS-202ENST00000397728 EFHC2Q5JST6 749 aa16.39■□□□□ 0.21
LSS-202ENST00000397728 SPRYD7Q5W111 196 aa16.39■□□□□ 0.21
LSS-202ENST00000397728 ANKS4BQ8N8V4 417 aa16.39■□□□□ 0.21
LSS-202ENST00000397728 RNF25Q96BH1 459 aaPredicted RBP16.39■□□□□ 0.21
LSS-202ENST00000397728 APBA2Q99767 749 aa16.39■□□□□ 0.21
LSS-202ENST00000397728 DHX35Q9H5Z1 703 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms