RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 PNPLA4P41247 253 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 EMC2Q15006 297 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 ARHGEF6Q15052 776 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 LIN9Q5TKA1 542 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 TSHZ1Q6ZSZ6 1077 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 HACE1Q8IYU2 909 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 NIPA2Q8N8Q9 360 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 TMEM35BQ8NCS4 154 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 UPF1Q92900 1129 aaKnown RBP eCLIP6.31□□□□□ -1.4
PTPRD-206ENST00000397617 PLCD4Q9BRC7 762 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 RASAL2Q9UJF2 1139 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 MYO18AQ92614 2054 aaKnown RBP6.31□□□□□ -1.4
PTPRD-206ENST00000397617 CFAP69A5D8W1 941 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 HMGCRP04035 888 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 HOXA13P31271 388 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-206ENST00000397617 SLC18A1P54219 525 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 PSMC6P62333 389 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 NR1H3Q13133 447 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 TAX1BP1Q86VP1 789 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 HOOK3Q86VS8 718 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 CYP2W1Q8TAV3 490 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 NIF3L1Q9GZT8 377 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 SAMM50Q9Y512 469 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-206ENST00000397617 KATNAL1Q9BW62 490 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 PCYOX1Q9UHG3 505 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 TRPM7Q96QT4 1865 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 LCTP09848 1927 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 PTPN11Q06124 597 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-206ENST00000397617 INCA1Q0VD86 236 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 CCDC181Q5TID7 509 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 LRIG3Q6UXM1 1119 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 TOGARAM2Q6ZUX3 1019 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 CPXCR1Q8N123 301 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 TSC1Q92574 1164 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 TAF1DQ9H5J8 278 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-206ENST00000397617 RETREG1Q9H6L5 497 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 SENP1Q9P0U3 644 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 F5P12259 2224 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 BACH1O14867 736 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 TCEA3O75764 348 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 GNRH1P01148 92 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 GNAT1P11488 350 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 MYL6P60660 151 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 VGLL4Q14135 290 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 LONRF2Q1L5Z9 754 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 DCAF4L1Q3SXM0 396 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 ASCC2Q9H1I8 757 aaPredicted RBP6.3□□□□□ -1.4
PTPRD-206ENST00000397617 OTOFQ9HC10 1997 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 PSTPIP1O43586 416 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 FAM155BO75949 473 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 POLGP54098 1239 aaPredicted RBP6.3□□□□□ -1.4
PTPRD-206ENST00000397617 SLMAPQ14BN4 828 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 PEX26Q7Z412 305 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 IQCKQ8N0W5 287 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 USP38Q8NB14 1042 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 CCDC102AQ96A19 550 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 FNBP1Q96RU3 617 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 LSM14BQ9BX40 385 aaKnown RBP6.3□□□□□ -1.4
PTPRD-206ENST00000397617 FUT8Q9BYC5 575 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 RRN3Q9NYV6 651 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 GUCA1BQ9UMX6 200 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 CNTNAP2Q9UHC6 1331 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 DENND3A2RUS2 1198 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 CYP2C19P33261 490 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 POLR2FP61218 127 aaKnown RBP6.3□□□□□ -1.4
PTPRD-206ENST00000397617 ERCC6LQ2NKX8 1250 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 FBXO38Q6PIJ6 1188 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 RBM41Q96IZ5 413 aaKnown RBP6.3□□□□□ -1.4
PTPRD-206ENST00000397617 TRMT1Q9NXH9 659 aaKnown RBP6.3□□□□□ -1.4
PTPRD-206ENST00000397617 DNAJC12Q9UKB3 198 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 FAM196BA6NMK8 535 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 GH1P01241 217 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 EPHX2P34913 555 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 CDCA5Q96FF9 252 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 ADPGKQ9BRR6 497 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 CARD6Q9BX69 1037 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 RAB20Q9NX57 234 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 SAGE1Q9NXZ1 904 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 NOCTQ9UK39 431 aaKnown RBP6.3□□□□□ -1.4
PTPRD-206ENST00000397617 ADGRA2Q96PE1 1338 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 GSTTP1A0A1W2PQM5 241 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 ZNF263O14978 683 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 ZBTB7AO95365 584 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 MMP8P22894 467 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 DNAJB2P25686 324 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 DRAP1Q14919 205 aaPredicted RBP6.3□□□□□ -1.4
PTPRD-206ENST00000397617 DONSONQ9NYP3 566 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 GABBR1Q9UBS5 961 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 CPSF3Q9UKF6 684 aaKnown RBP6.3□□□□□ -1.4
PTPRD-206ENST00000397617 MED7O43513 233 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 IVLP07476 585 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 CYP3A5P20815 502 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 KCNA4P22459 653 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 HIRAP54198 1017 aaPredicted RBP6.3□□□□□ -1.4
PTPRD-206ENST00000397617 CELF3Q5SZQ8 465 aaKnown RBP6.3□□□□□ -1.4
PTPRD-206ENST00000397617 C8orf74Q6P047 294 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 CYFIP1Q7L576 1253 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 TPCN2Q8NHX9 752 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 IPO4Q8TEX9 1081 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms